| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963809
Identifier: 157963809
GI number: 157963809
Start: 4858085
End: 4858633
Strand: Direct
Name: 157963809
Synonym: Spea_3998
Alternate gene names: NA
Gene position: 4858085-4858633 (Clockwise)
Preceding gene: 157963808
Following gene: 157963810
Centisome position: 93.88
GC content: 46.99
Gene sequence:
>549_bases ATGAACAAACTATTAGGAGTTAGCCCACGTCACCCGGGGCTTTGGCAAGACAGACCGTCTACGAGCATGAGTGCAAACTC GGGCAATGAGATCACTAGCATGGTGACGAAGACTCAAGGCCGCGATGAGCTCACTCAGATTAGTGCTCAACTTTCACAGC TAAGCCAACAAGGCCGCTGGATTGTACTGATAAGCCCTCCTAATATTGGTTATAAACAGATGTTAGCGGCGGCAGGCGTT AGAATGGACCGGATTTTACTGGTCCACGCTAAAGACGAGGTTGAAACACTTTGGGCAATGGAAAAAGCATTGACCAGTGG CACCTCAAGCGCAGTAATCACCTGGACTAATTCGTTAGATGCTCGCGATAGCCGACGCTTACAGATTGTTGCTAAAAGCG CACGCGCTGTAGGCATGATTATCGAAAATGCCATTGAAAGCGCCGATGCAAACTCTACTGAAGTTAACAATAGCCATTTA CTCGATAGTTCAGTAAGCGCTCAGGATTGTAGTTTTGTACAAGCGTCATTATTTGGCGCCATTCATTAA
Upstream 100 bases:
>100_bases CAGAAAACGAAGACTACTCACCAATTGAGGTGGATCTAGCAAACCAAAGCTTAAGTATTGAAGGTTTAGCCGTTGGTGTG ATCCGCAATGGAGACTGGCA
Downstream 100 bases:
>100_bases TACACTCAGTTAACCCTCTTTCTAACGACCAAGTTTCAGCTAAAGACTCTTGGTTTTGCTAAAGCTCTCAATCGAGAGCT TTTTTATTGCCAAAAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNKLLGVSPRHPGLWQDRPSTSMSANSGNEITSMVTKTQGRDELTQISAQLSQLSQQGRWIVLISPPNIGYKQMLAAAGV RMDRILLVHAKDEVETLWAMEKALTSGTSSAVITWTNSLDARDSRRLQIVAKSARAVGMIIENAIESADANSTEVNNSHL LDSSVSAQDCSFVQASLFGAIH
Sequences:
>Translated_182_residues MNKLLGVSPRHPGLWQDRPSTSMSANSGNEITSMVTKTQGRDELTQISAQLSQLSQQGRWIVLISPPNIGYKQMLAAAGV RMDRILLVHAKDEVETLWAMEKALTSGTSSAVITWTNSLDARDSRRLQIVAKSARAVGMIIENAIESADANSTEVNNSHL LDSSVSAQDCSFVQASLFGAIH >Mature_182_residues MNKLLGVSPRHPGLWQDRPSTSMSANSGNEITSMVTKTQGRDELTQISAQLSQLSQQGRWIVLISPPNIGYKQMLAAAGV RMDRILLVHAKDEVETLWAMEKALTSGTSSAVITWTNSLDARDSRRLQIVAKSARAVGMIIENAIESADANSTEVNNSHL LDSSVSAQDCSFVQASLFGAIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19707; Mature: 19707
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLLGVSPRHPGLWQDRPSTSMSANSGNEITSMVTKTQGRDELTQISAQLSQLSQQGRW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCE IVLISPPNIGYKQMLAAAGVRMDRILLVHAKDEVETLWAMEKALTSGTSSAVITWTNSLD EEEECCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCC ARDSRRLQIVAKSARAVGMIIENAIESADANSTEVNNSHLLDSSVSAQDCSFVQASLFGA CCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC IH CC >Mature Secondary Structure MNKLLGVSPRHPGLWQDRPSTSMSANSGNEITSMVTKTQGRDELTQISAQLSQLSQQGRW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCE IVLISPPNIGYKQMLAAAGVRMDRILLVHAKDEVETLWAMEKALTSGTSSAVITWTNSLD EEEECCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCC ARDSRRLQIVAKSARAVGMIIENAIESADANSTEVNNSHLLDSSVSAQDCSFVQASLFGA CCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC IH CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA