| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963779
Identifier: 157963779
GI number: 157963779
Start: 4821524
End: 4822015
Strand: Reverse
Name: 157963779
Synonym: Spea_3968
Alternate gene names: NA
Gene position: 4822015-4821524 (Counterclockwise)
Preceding gene: 157963781
Following gene: 157963778
Centisome position: 93.19
GC content: 36.18
Gene sequence:
>492_bases ATGAGTGCATCTGTAATTTTTAGTTATGCCTTTATGTACTTTGTATTATTCCTTGTGGTGCCATTTGTTTTAGTGACATT TACAATGACTTGTATAAAGTTCTTTAAAGCAAGCGAGTTTGTAGCATCTAATATTAAGTTAAAGCCTAATTCATTAGAAA GTCAGCCAGGTAGCTTTATCAATAAATTGAACGCCTTGGTTGTGGGTAAATACAATGTGCTATATGGCACAACATTAGAT AACCTTTGTGACGTTGATAAAAATGAAAAAGAGCAAGATGCTCACAGTTACTTGCAAGCTTGTCATCTAGATTATGTTTT GGTCGATAGTGAATCTTCAACGGTAAAGCTCGTTATTACAGACCCGCAGCATAACTCTGAAGAGAGCAACAGATTCATCG ACGATACATTAGCCAAAATGGGTGTAAAAGTACTTCACTTAGCCAAGAATGACTGTGACGCAAACCTGATCAAAAGCTCG TTAGTCGCATAA
Upstream 100 bases:
>100_bases GAAACACTTGATTTATATCAATGTTTTAATCGGTTAAATAACAATACTTAAATAGCGTTAAAATAAGTTTTATAATTAAA ATGTTAGTTTGGAGGTCGTT
Downstream 100 bases:
>100_bases CATCAATGGGTGTTGCAACATTAGTTGTAACACCTCATCCCCAACTCTCTTTATTTATCACTTAGTAATGTGAGGACACC CCATGTCCAGCTTATTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSASVIFSYAFMYFVLFLVVPFVLVTFTMTCIKFFKASEFVASNIKLKPNSLESQPGSFINKLNALVVGKYNVLYGTTLD NLCDVDKNEKEQDAHSYLQACHLDYVLVDSESSTVKLVITDPQHNSEESNRFIDDTLAKMGVKVLHLAKNDCDANLIKSS LVA
Sequences:
>Translated_163_residues MSASVIFSYAFMYFVLFLVVPFVLVTFTMTCIKFFKASEFVASNIKLKPNSLESQPGSFINKLNALVVGKYNVLYGTTLD NLCDVDKNEKEQDAHSYLQACHLDYVLVDSESSTVKLVITDPQHNSEESNRFIDDTLAKMGVKVLHLAKNDCDANLIKSS LVA >Mature_162_residues SASVIFSYAFMYFVLFLVVPFVLVTFTMTCIKFFKASEFVASNIKLKPNSLESQPGSFINKLNALVVGKYNVLYGTTLDN LCDVDKNEKEQDAHSYLQACHLDYVLVDSESSTVKLVITDPQHNSEESNRFIDDTLAKMGVKVLHLAKNDCDANLIKSSL VA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18189; Mature: 18058
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASVIFSYAFMYFVLFLVVPFVLVTFTMTCIKFFKASEFVASNIKLKPNSLESQPGSFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHH NKLNALVVGKYNVLYGTTLDNLCDVDKNEKEQDAHSYLQACHLDYVLVDSESSTVKLVIT HHHHHHEEECCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEE DPQHNSEESNRFIDDTLAKMGVKVLHLAKNDCDANLIKSSLVA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure SASVIFSYAFMYFVLFLVVPFVLVTFTMTCIKFFKASEFVASNIKLKPNSLESQPGSFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHH NKLNALVVGKYNVLYGTTLDNLCDVDKNEKEQDAHSYLQACHLDYVLVDSESSTVKLVIT HHHHHHEEECCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEE DPQHNSEESNRFIDDTLAKMGVKVLHLAKNDCDANLIKSSLVA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA