Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963761

Identifier: 157963761

GI number: 157963761

Start: 4803675

End: 4804667

Strand: Reverse

Name: 157963761

Synonym: Spea_3950

Alternate gene names: NA

Gene position: 4804667-4803675 (Counterclockwise)

Preceding gene: 157963762

Following gene: 157963759

Centisome position: 92.85

GC content: 45.02

Gene sequence:

>993_bases
ATGAACAAAGGAATGATCGACATGAGAATAACAACTAGGGCATTTATCTATTCGGTATGGTTCTGTTTAAGCGTGATCTT
GTTGAGACCCGCACAGGCCGCAAGCCATGATGCTATCAGCTTTTTAAGTAAAGCAGATGCCGCCAAGGTGCTGACTCTGG
AAGATGACTTTGTCAGCGGCATTAGCCAATTCGATATGGCTTCGCGCATGAAGCGTGAAACTAGTCCGAGTAAAGCTGAT
TATTTAGCGTTTGTAGCAAGCCAGACCTTAGACTGGACACAGCAAGAACGCGTTGCAGTCACTCAAGCCTTTAATCAGCT
GCAACCTAAGCTGAGCGCATTAAAGGTCGTGTTGCCACAGCCGATTCAGTTTATTAAAACCACAGGTTTAGAAGAGGGCG
GCGCCGCCTATACTCGTGGGCAGGCCATTATTTTGCAGCAGAAGCAGATTGATAATCAGCAAGGGCTGCCAGCCTTAATC
GCCCATGAGCTACTGCATGTTTTTTCTCGCTTCAATCCAGAGGTGAAGCAGCAACTTTATCAAGCGATCGGCTACTATCC
AGTAGGTGAAATTGCTTTTCCTACATCGATTGCCAAGCAAAAAATTACTAACCCAGATGCCCCCATAAATGACTTCGCGA
TTAGAGTGGAGCATGATGGAAAAATGGTGTGGGTCGTGCCGATTCTGTATTCCGACCTGCCAAGTTACAGCCTTGAGAAA
GGTGGCGAGTTTTTTGATTATCTCGAATTTAAATTTGTGATTGTCGGTGGCGATGAACAGCCTAATATTGCAGCCTACGA
TCCTGATAACGCACAAATCGTGAAGGTTTCGGAGTTTAAAGGTTTCTTTAAACAGATCGGTCGTAATACCAATTACATTA
TTCACCCCGAAGAGATCATCGCTGAGAACTTCTCATTCCTGATGACAGGAGAGACAGAGCTTAAATCGCCTAAATTACTG
CACAAGATTGAGCAGGTATTTCTGGCACAGTAA

Upstream 100 bases:

>100_bases
GACTTTAGAAGTGTTGGGTAATGATGTGGTGCTGTTTAACAAAGCTTAAGTCAGCAAGCTTTAACTGTGCTGGCTGACGG
CGTAAGGGCTGGCGTTAAAT

Downstream 100 bases:

>100_bases
TTTATGCCCCTAGCACAGAGGCTAACGCTCAGCTAGATGCTGAGTTTTAGTCGTCTAGCCTTCAACGCTAAGGACTATTG
GTTTAGGTAGTGCAAGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MNKGMIDMRITTRAFIYSVWFCLSVILLRPAQAASHDAISFLSKADAAKVLTLEDDFVSGISQFDMASRMKRETSPSKAD
YLAFVASQTLDWTQQERVAVTQAFNQLQPKLSALKVVLPQPIQFIKTTGLEEGGAAYTRGQAIILQQKQIDNQQGLPALI
AHELLHVFSRFNPEVKQQLYQAIGYYPVGEIAFPTSIAKQKITNPDAPINDFAIRVEHDGKMVWVVPILYSDLPSYSLEK
GGEFFDYLEFKFVIVGGDEQPNIAAYDPDNAQIVKVSEFKGFFKQIGRNTNYIIHPEEIIAENFSFLMTGETELKSPKLL
HKIEQVFLAQ

Sequences:

>Translated_330_residues
MNKGMIDMRITTRAFIYSVWFCLSVILLRPAQAASHDAISFLSKADAAKVLTLEDDFVSGISQFDMASRMKRETSPSKAD
YLAFVASQTLDWTQQERVAVTQAFNQLQPKLSALKVVLPQPIQFIKTTGLEEGGAAYTRGQAIILQQKQIDNQQGLPALI
AHELLHVFSRFNPEVKQQLYQAIGYYPVGEIAFPTSIAKQKITNPDAPINDFAIRVEHDGKMVWVVPILYSDLPSYSLEK
GGEFFDYLEFKFVIVGGDEQPNIAAYDPDNAQIVKVSEFKGFFKQIGRNTNYIIHPEEIIAENFSFLMTGETELKSPKLL
HKIEQVFLAQ
>Mature_330_residues
MNKGMIDMRITTRAFIYSVWFCLSVILLRPAQAASHDAISFLSKADAAKVLTLEDDFVSGISQFDMASRMKRETSPSKAD
YLAFVASQTLDWTQQERVAVTQAFNQLQPKLSALKVVLPQPIQFIKTTGLEEGGAAYTRGQAIILQQKQIDNQQGLPALI
AHELLHVFSRFNPEVKQQLYQAIGYYPVGEIAFPTSIAKQKITNPDAPINDFAIRVEHDGKMVWVVPILYSDLPSYSLEK
GGEFFDYLEFKFVIVGGDEQPNIAAYDPDNAQIVKVSEFKGFFKQIGRNTNYIIHPEEIIAENFSFLMTGETELKSPKLL
HKIEQVFLAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37135; Mature: 37135

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKGMIDMRITTRAFIYSVWFCLSVILLRPAQAASHDAISFLSKADAAKVLTLEDDFVSG
CCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHH
ISQFDMASRMKRETSPSKADYLAFVASQTLDWTQQERVAVTQAFNQLQPKLSALKVVLPQ
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCC
PIQFIKTTGLEEGGAAYTRGQAIILQQKQIDNQQGLPALIAHELLHVFSRFNPEVKQQLY
CHHHHHHCCCCCCCCCEECCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
QAIGYYPVGEIAFPTSIAKQKITNPDAPINDFAIRVEHDGKMVWVVPILYSDLPSYSLEK
HHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEHHCCCCCCCHHC
GGEFFDYLEFKFVIVGGDEQPNIAAYDPDNAQIVKVSEFKGFFKQIGRNTNYIIHPEEII
CCCCEEEEEEEEEEECCCCCCCEEEECCCCCEEEEHHHHHHHHHHHCCCCCEEECHHHHH
AENFSFLMTGETELKSPKLLHKIEQVFLAQ
HCCCCEEEECCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNKGMIDMRITTRAFIYSVWFCLSVILLRPAQAASHDAISFLSKADAAKVLTLEDDFVSG
CCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHH
ISQFDMASRMKRETSPSKADYLAFVASQTLDWTQQERVAVTQAFNQLQPKLSALKVVLPQ
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCC
PIQFIKTTGLEEGGAAYTRGQAIILQQKQIDNQQGLPALIAHELLHVFSRFNPEVKQQLY
CHHHHHHCCCCCCCCCEECCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
QAIGYYPVGEIAFPTSIAKQKITNPDAPINDFAIRVEHDGKMVWVVPILYSDLPSYSLEK
HHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEHHCCCCCCCHHC
GGEFFDYLEFKFVIVGGDEQPNIAAYDPDNAQIVKVSEFKGFFKQIGRNTNYIIHPEEII
CCCCEEEEEEEEEEECCCCCCCEEEECCCCCEEEEHHHHHHHHHHHCCCCCEEECHHHHH
AENFSFLMTGETELKSPKLLHKIEQVFLAQ
HCCCCEEEECCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA