| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is cpxA [H]
Identifier: 157963745
GI number: 157963745
Start: 4782070
End: 4783446
Strand: Direct
Name: cpxA [H]
Synonym: Spea_3934
Alternate gene names: 157963745
Gene position: 4782070-4783446 (Clockwise)
Preceding gene: 157963744
Following gene: 157963747
Centisome position: 92.41
GC content: 48.58
Gene sequence:
>1377_bases ATGCAGCTAACAAAAACCCCCAACAATATATTCGTCAAGCTACTGCTGGGTTTTTGGCTGTGTAGCTCCTTGATCATAGC CCTTATCGGCATGCTGCCGTTATTACAGCAAAACCATGATCAATCTGCGATTCCAGCTCCGTTAGAACGTTTACTGGAAA AAAGTGCCAAACGCATCAGCCAAAACCCACAAATTCTTAATTCAGACAAGCTCACCCATTGGAGTCGCTTTAAAGAATTC AAAGGTCGCCCTGCCCGCATCTACTTAGTCGACGAATACGGTAAGGTGCTCAATAGCCATAAGTCATCACGTTCACTGAG GCGCTTTATGCTGATGGCCGATGAAGCGGGCCATCCAATTAAACATCAATTTAGGGATGAGCTGATTTTCGGCCCTTATA ACTTTGAGATAAAAGGTAAGCCTTACAGCCTATACGGCCGCTTACCAGAACATCATCCAAGGCCTTGGTTCTTCTTCTTT ATCGACAATAAGATCCTCACATTGAGCATTGCCATTATCTTATCTGGCCTGCTCTGCGGACTATTTGCCTGGCATCTCGG TAAGCCGTTGCGCTCACTAAAGCGCAGCGCCGATGCACTCGCAGCTGGCGACTTAAGCAGCCGTGTTGATATGGCAACAG CCCTGCGTAACGACGAAGTTGGCCAATTAGCTCAAGCCTTTAATGGCATGGCTAACTCGGTTGAAGATATGGTTAACAGC CAGCAGAGGTTGATTAGCGATATCTCTCATGAGCTGCGCACCCCGCTAACAAGGCTCAAGCTCTCTTTGGCACTGAGTCG TAAGAAGGGGCAAGAAACACCAGAGATGAAGCGAATTGAGTATGAAGCCGATCAACTCGAGCAGATGATTGCCGAGCTGT TAGAGCTGTCTAGGGTGAAGCTCAATGCCAACGAGAATAAACGCAGTCTTGAGCTGGCCGAAACCTTAAGCCAAGTCTTG GACGATGCCGATTTCGAAGCGCAGCAACAGCAAAAGCAGCTGCATATCGATATCGATGAATCTATCGTGATACCGCTTTA CCCTAGGCCCTTATCTAGAGCGGTAGAGAACCTGCTCAGAAATGCGATTCGTTACGCCAATACCCAAGTCTCAATTCAAG CCATGGCCAGTGCCAGTGCCAGCGGCGTGCAGATTGAGATTATCGATGATGGCCCAGGCATTAGCGACGAAGCCGACTTA GAAGCGATATTCAAGCCTTTCTATCGACCACAATCGGCGCGAGAACGGGAGTCTGGCGGCTGGGGGTTAGGTTTGGCGAT TGCCAAGGCGGCAATTCAAGCCCATCAAGGCAAGATCACCGCAGTCAATCAACAACCTAGCGGATTAAAGATCAACATTC ACTTGCCTCAAAAGTAA
Upstream 100 bases:
>100_bases CATGCACCTTTCTAACCTGCGTAAGAAGATGCCAGAGCGTGATGATGGCCGCCCTCGAGTGAAAACTATTCGTGGTAAAG GCTACATTTGGTTACCTTAA
Downstream 100 bases:
>100_bases GCGCTCTGCCAGCATCTAAGCTGCGTTTGCCGCAGGCTCAAGCCGGGCAAGCCAGCTGGCATAGTCCGCCAGCTTTGGAA TGCGCTTATCTGAGTGCCCC
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MQLTKTPNNIFVKLLLGFWLCSSLIIALIGMLPLLQQNHDQSAIPAPLERLLEKSAKRISQNPQILNSDKLTHWSRFKEF KGRPARIYLVDEYGKVLNSHKSSRSLRRFMLMADEAGHPIKHQFRDELIFGPYNFEIKGKPYSLYGRLPEHHPRPWFFFF IDNKILTLSIAIILSGLLCGLFAWHLGKPLRSLKRSADALAAGDLSSRVDMATALRNDEVGQLAQAFNGMANSVEDMVNS QQRLISDISHELRTPLTRLKLSLALSRKKGQETPEMKRIEYEADQLEQMIAELLELSRVKLNANENKRSLELAETLSQVL DDADFEAQQQQKQLHIDIDESIVIPLYPRPLSRAVENLLRNAIRYANTQVSIQAMASASASGVQIEIIDDGPGISDEADL EAIFKPFYRPQSARERESGGWGLGLAIAKAAIQAHQGKITAVNQQPSGLKINIHLPQK
Sequences:
>Translated_458_residues MQLTKTPNNIFVKLLLGFWLCSSLIIALIGMLPLLQQNHDQSAIPAPLERLLEKSAKRISQNPQILNSDKLTHWSRFKEF KGRPARIYLVDEYGKVLNSHKSSRSLRRFMLMADEAGHPIKHQFRDELIFGPYNFEIKGKPYSLYGRLPEHHPRPWFFFF IDNKILTLSIAIILSGLLCGLFAWHLGKPLRSLKRSADALAAGDLSSRVDMATALRNDEVGQLAQAFNGMANSVEDMVNS QQRLISDISHELRTPLTRLKLSLALSRKKGQETPEMKRIEYEADQLEQMIAELLELSRVKLNANENKRSLELAETLSQVL DDADFEAQQQQKQLHIDIDESIVIPLYPRPLSRAVENLLRNAIRYANTQVSIQAMASASASGVQIEIIDDGPGISDEADL EAIFKPFYRPQSARERESGGWGLGLAIAKAAIQAHQGKITAVNQQPSGLKINIHLPQK >Mature_458_residues MQLTKTPNNIFVKLLLGFWLCSSLIIALIGMLPLLQQNHDQSAIPAPLERLLEKSAKRISQNPQILNSDKLTHWSRFKEF KGRPARIYLVDEYGKVLNSHKSSRSLRRFMLMADEAGHPIKHQFRDELIFGPYNFEIKGKPYSLYGRLPEHHPRPWFFFF IDNKILTLSIAIILSGLLCGLFAWHLGKPLRSLKRSADALAAGDLSSRVDMATALRNDEVGQLAQAFNGMANSVEDMVNS QQRLISDISHELRTPLTRLKLSLALSRKKGQETPEMKRIEYEADQLEQMIAELLELSRVKLNANENKRSLELAETLSQVL DDADFEAQQQQKQLHIDIDESIVIPLYPRPLSRAVENLLRNAIRYANTQVSIQAMASASASGVQIEIIDDGPGISDEADL EAIFKPFYRPQSARERESGGWGLGLAIAKAAIQAHQGKITAVNQQPSGLKINIHLPQK
Specific function: This protein is involved in several diverse cellular processes, such as the functioning of acetohydroxyacid synthetase I, in the biosynthesis of isoleucine and valine, the TraJ protein activation activity for tra gene expression in F plasmid, and the synt
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790346, Length=381, Percent_Identity=40.4199475065617, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1787894, Length=327, Percent_Identity=31.1926605504587, Blast_Score=128, Evalue=1e-30, Organism=Escherichia coli, GI1786783, Length=330, Percent_Identity=31.5151515151515, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1788393, Length=271, Percent_Identity=33.210332103321, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1789808, Length=240, Percent_Identity=29.1666666666667, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1786912, Length=240, Percent_Identity=30.8333333333333, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1786600, Length=226, Percent_Identity=25.6637168141593, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI87082128, Length=295, Percent_Identity=24.7457627118644, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790436, Length=218, Percent_Identity=28.4403669724771, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1790551, Length=300, Percent_Identity=26.6666666666667, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1788279, Length=285, Percent_Identity=25.2631578947368, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI145693157, Length=261, Percent_Identity=25.2873563218391, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1790861, Length=300, Percent_Identity=24, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1789149, Length=354, Percent_Identity=23.728813559322, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789403, Length=274, Percent_Identity=27.7372262773723, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51564; Mature: 51564
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTKTPNNIFVKLLLGFWLCSSLIIALIGMLPLLQQNHDQSAIPAPLERLLEKSAKRIS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC QNPQILNSDKLTHWSRFKEFKGRPARIYLVDEYGKVLNSHKSSRSLRRFMLMADEAGHPI CCCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCCH KHQFRDELIFGPYNFEIKGKPYSLYGRLPEHHPRPWFFFFIDNKILTLSIAIILSGLLCG HHHHHHCEEECCEEEEECCCCCEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH LFAWHLGKPLRSLKRSADALAAGDLSSRVDMATALRNDEVGQLAQAFNGMANSVEDMVNS HHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH QQRLISDISHELRTPLTRLKLSLALSRKKGQETPEMKRIEYEADQLEQMIAELLELSRVK HHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHEE LNANENKRSLELAETLSQVLDDADFEAQQQQKQLHIDIDESIVIPLYPRPLSRAVENLLR ECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEECCCCEEEEECCCHHHHHHHHHHH NAIRYANTQVSIQAMASASASGVQIEIIDDGPGISDEADLEAIFKPFYRPQSARERESGG HHHHHCCCCEEEHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHCCCC WGLGLAIAKAAIQAHQGKITAVNQQPSGLKINIHLPQK CHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCC >Mature Secondary Structure MQLTKTPNNIFVKLLLGFWLCSSLIIALIGMLPLLQQNHDQSAIPAPLERLLEKSAKRIS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC QNPQILNSDKLTHWSRFKEFKGRPARIYLVDEYGKVLNSHKSSRSLRRFMLMADEAGHPI CCCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCCH KHQFRDELIFGPYNFEIKGKPYSLYGRLPEHHPRPWFFFFIDNKILTLSIAIILSGLLCG HHHHHHCEEECCEEEEECCCCCEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH LFAWHLGKPLRSLKRSADALAAGDLSSRVDMATALRNDEVGQLAQAFNGMANSVEDMVNS HHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH QQRLISDISHELRTPLTRLKLSLALSRKKGQETPEMKRIEYEADQLEQMIAELLELSRVK HHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHEE LNANENKRSLELAETLSQVLDDADFEAQQQQKQLHIDIDESIVIPLYPRPLSRAVENLLR ECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEECCCCEEEEECCCHHHHHHHHHHH NAIRYANTQVSIQAMASASASGVQIEIIDDGPGISDEADLEAIFKPFYRPQSARERESGG HHHHHCCCCEEEHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHCCCC WGLGLAIAKAAIQAHQGKITAVNQQPSGLKINIHLPQK CHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]