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The map label for this gene is 157963731

Identifier: 157963731

GI number: 157963731

Start: 4768626

End: 4769636

Strand: Reverse

Name: 157963731

Synonym: Spea_3920

Alternate gene names: NA

Gene position: 4769636-4768626 (Counterclockwise)

Preceding gene: 157963733

Following gene: 157963726

Centisome position: 92.17

GC content: 47.87

Gene sequence:

>1011_bases
ATGAAGATATTCATGCTGTTAATAAGCTTATTTAGTTTTGCTACTGTGGCGATGGAATGGAATATTCAAAGCCTAGCCCC
CGGTGTTTCATTTCGAGGTAGCGCAGTTTTGGATGGCGTGGTTTGGGTGACTGGGACAGATAATCGCGTCTATATCTCTA
AAGATTCAGGTAACAGCTGGCAAGATGTATCGGTAAAGGGGCTGCCTTTGACTGACTTTCGCGATATTGAAGTGTTCGAT
GCCAATACGGCGATTGTGATGGGAGCGGGTGAAGGTGGCTTATCTAAGCTGTATATCACTCAGAACCAGGGTCTAAGCTG
GCAACTCTTGTTTGATAATCCCGATGAGCTTGGCTTTTTCAACTCAATTGCCTTTTGGGATCGTAATAACGGGTTACTGC
TGGGAGATCCTGTTGGTGGTTGCTATGTGATATTACGTACCTCTGATGGTGGTAAAAGCTGGCAACGAGTTGCCCAAGGT
GAGTTGCCTGAAATGCTCGATAAAGAGGTCGCCTTTGCCGCCAGTGGTAATACATTAATTGTTGGCAAAAGAGGGCGGGC
TTGGTTTACCACCGGAGGCTATAGTAGCTCAGCTTATAGTAGCGCTGACTCGGGGCAGCACTGGCGCCGGCGTCCAATTG
CTCTCTATGATGATACCCAAACCGCAGGTGGCTATGCGCTAGCATTTAATCATTTAGGTGATCTATTTGTGCTGGGAGGA
GATTATCAGCAACGAGATAAGTTTGATGCCAATATGGTCTACAGGAAAGGCTATGTATGGCATAAAGCGCCGGGTACCAC
ACCAGGCCTACGCACAGCCATGGCGTGTTACCAAGAGATTTGCATCGCGACCGGTAAGCTATCGTCAGATATTTCAATCG
ATCATGGTTACAGTTGGCAGCCACTGTTGATCAATGGTCAGGCTCAGGGCTTTTTTACGCTCGCGATTGACGGTAACACC
TTAGTGGCTGGTGGGCATGATGGCCGAGTCGCCGTGTATACTTTTGAATAG

Upstream 100 bases:

>100_bases
CGGATTTTCGATTGCAGGAGCCGGAGGGTTTTCCGGCTTGCCTATCTATGCTGATTGGTCGATAGTGGTTGTTAGGGACA
CGCTCTAAAAAAGGAAATAG

Downstream 100 bases:

>100_bases
TCGAGTCTATTACAGCAACCCAAACTAAAGTTTGGGCTTTTAATCGATGAATATGTTGGGAGAGGATTACCCCAAAATAA
GATACATAATAAGGGCGCCC

Product: BNR repeat-containing glycosyl hydrolase

Products: NA

Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; Photosystem II Stability/Assembly Protein; Photosystem II Stability/Assembly Factor-Like Protein; Glycosyl Hydrolase; BNR Repeat-Containing Protein; LOW QUALITY PROTEIN Oxidoreductase

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKIFMLLISLFSFATVAMEWNIQSLAPGVSFRGSAVLDGVVWVTGTDNRVYISKDSGNSWQDVSVKGLPLTDFRDIEVFD
ANTAIVMGAGEGGLSKLYITQNQGLSWQLLFDNPDELGFFNSIAFWDRNNGLLLGDPVGGCYVILRTSDGGKSWQRVAQG
ELPEMLDKEVAFAASGNTLIVGKRGRAWFTTGGYSSSAYSSADSGQHWRRRPIALYDDTQTAGGYALAFNHLGDLFVLGG
DYQQRDKFDANMVYRKGYVWHKAPGTTPGLRTAMACYQEICIATGKLSSDISIDHGYSWQPLLINGQAQGFFTLAIDGNT
LVAGGHDGRVAVYTFE

Sequences:

>Translated_336_residues
MKIFMLLISLFSFATVAMEWNIQSLAPGVSFRGSAVLDGVVWVTGTDNRVYISKDSGNSWQDVSVKGLPLTDFRDIEVFD
ANTAIVMGAGEGGLSKLYITQNQGLSWQLLFDNPDELGFFNSIAFWDRNNGLLLGDPVGGCYVILRTSDGGKSWQRVAQG
ELPEMLDKEVAFAASGNTLIVGKRGRAWFTTGGYSSSAYSSADSGQHWRRRPIALYDDTQTAGGYALAFNHLGDLFVLGG
DYQQRDKFDANMVYRKGYVWHKAPGTTPGLRTAMACYQEICIATGKLSSDISIDHGYSWQPLLINGQAQGFFTLAIDGNT
LVAGGHDGRVAVYTFE
>Mature_336_residues
MKIFMLLISLFSFATVAMEWNIQSLAPGVSFRGSAVLDGVVWVTGTDNRVYISKDSGNSWQDVSVKGLPLTDFRDIEVFD
ANTAIVMGAGEGGLSKLYITQNQGLSWQLLFDNPDELGFFNSIAFWDRNNGLLLGDPVGGCYVILRTSDGGKSWQRVAQG
ELPEMLDKEVAFAASGNTLIVGKRGRAWFTTGGYSSSAYSSADSGQHWRRRPIALYDDTQTAGGYALAFNHLGDLFVLGG
DYQQRDKFDANMVYRKGYVWHKAPGTTPGLRTAMACYQEICIATGKLSSDISIDHGYSWQPLLINGQAQGFFTLAIDGNT
LVAGGHDGRVAVYTFE

Specific function: Unknown

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36675; Mature: 36675

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFMLLISLFSFATVAMEWNIQSLAPGVSFRGSAVLDGVVWVTGTDNRVYISKDSGNSW
CHHHHHHHHHHHHEEEEEEECHHHHCCCCCCCCCEEECEEEEEEECCCEEEEECCCCCCC
QDVSVKGLPLTDFRDIEVFDANTAIVMGAGEGGLSKLYITQNQGLSWQLLFDNPDELGFF
CEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCC
NSIAFWDRNNGLLLGDPVGGCYVILRTSDGGKSWQRVAQGELPEMLDKEVAFAASGNTLI
CEEEEEECCCCEEEECCCCCEEEEEEECCCCHHHHHHHCCCCHHHHCCCEEEEECCCEEE
VGKRGRAWFTTGGYSSSAYSSADSGQHWRRRPIALYDDTQTAGGYALAFNHLGDLFVLGG
EECCCCEEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCEEEEECCCCCEEEECC
DYQQRDKFDANMVYRKGYVWHKAPGTTPGLRTAMACYQEICIATGKLSSDISIDHGYSWQ
CCHHCCCCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC
PLLINGQAQGFFTLAIDGNTLVAGGHDGRVAVYTFE
EEEEECCCCEEEEEEECCCEEEECCCCCEEEEEEEC
>Mature Secondary Structure
MKIFMLLISLFSFATVAMEWNIQSLAPGVSFRGSAVLDGVVWVTGTDNRVYISKDSGNSW
CHHHHHHHHHHHHEEEEEEECHHHHCCCCCCCCCEEECEEEEEEECCCEEEEECCCCCCC
QDVSVKGLPLTDFRDIEVFDANTAIVMGAGEGGLSKLYITQNQGLSWQLLFDNPDELGFF
CEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCC
NSIAFWDRNNGLLLGDPVGGCYVILRTSDGGKSWQRVAQGELPEMLDKEVAFAASGNTLI
CEEEEEECCCCEEEECCCCCEEEEEEECCCCHHHHHHHCCCCHHHHCCCEEEEECCCEEE
VGKRGRAWFTTGGYSSSAYSSADSGQHWRRRPIALYDDTQTAGGYALAFNHLGDLFVLGG
EECCCCEEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCEEEEECCCCCEEEECC
DYQQRDKFDANMVYRKGYVWHKAPGTTPGLRTAMACYQEICIATGKLSSDISIDHGYSWQ
CCHHCCCCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC
PLLINGQAQGFFTLAIDGNTLVAGGHDGRVAVYTFE
EEEEECCCCEEEEEEECCCEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA