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The map label for this gene is yccM [H]

Identifier: 157963723

GI number: 157963723

Start: 4757204

End: 4758418

Strand: Direct

Name: yccM [H]

Synonym: Spea_3912

Alternate gene names: 157963723

Gene position: 4757204-4758418 (Clockwise)

Preceding gene: 157963722

Following gene: 157963727

Centisome position: 91.93

GC content: 50.12

Gene sequence:

>1215_bases
ATGAGCTTTATTGAATCATTAACTCTTGCCCTAGCGCTGACCTATAGCGTTAGCCTACTTTATTGGAGCGGCAAGAAATG
GGGCGCATTCGCCACTGGCGGGCTCATTACTGGAGCTATTATTTCTAGCCTATATTGGCCTCTCATCGCCGCGCTGGGTA
TCGCAGTTATCGGTATCGCGATAGGCCGCAAATTCCAACCTACAGTTGCCCAAGGTGAATTGCGCGCTAATCATATGCGA
GATGGCGTGCAGCACTTGCTCGCCTTATCCATGCTACTGGTTGGCGTACAGTTTACGGTCAACAGCGCGCTGCTAAAGGC
TGGGATAACCCCGTGGCTGATGCGACCCGATGTTGGCGATGCCTTCCTGCCTATTGCTGGCGGTATTGAGATAAAGGCGA
TTATCAGCTTGGGAATATGGGACCAAAATCATCCTGCTGCTGCGGTTATGCTAACGGTTGTTTTACTCACAGGCCTACTG
TGTAAACGTGCCTTTTGCGGCTGGGCCTGCCCGTTAGGCTTAGCAGGTGAATATCTGTATAAGCTCAGAAAGCGTTTTAT
CAAGCAAGAGCTACTCCCTCCAGCTTGGATAGACTGGCCACTGCGGATGCTCAAATACCTGTTATTGCTGGCCTTGCTAT
ACATTGTCCTCGGTATGCCTACCATGAGTATCCCCGGCTATTTAAACAGTAATTACCATAAGATTGCCGATCTTAAGATG
GCGCTATTTTTCATCACCCCAGGCTTAGTCACACTTATCTGCTTCGGCATTATTTTGGGTCTAGCAGCCTGGCGTCGCCA
AGGCTTTTGCCGCTATATCTGTCCCTACGGCGCGCTGCTTGGCCTGCTCAGTTTCTTAAGCCCACTTAAGATCCGTCGCA
GTACCCAGCACTGCTTAATCGAATCAAAAGGCATGAATTGCGACAAGTGCAGCCGCGCCTGCCCGGCTAATATCTCGGTG
CATAATCAGATAAACATTCGCTCAGACGAGTGCCAAGCCTGCATGCGCTGTATATCGGCCTGCCCTAAGAAAGAGGCACT
ACACTTTAGCACTCGCAACGGCTGGAAACTCTCGGCTCGCGGCCTAACGATTATGTTATTCGCCATCATGTTCCTATTGC
CGCTTTTCGCTTACCTTGGTGGCTTCTGGCACAGTGAAACACCTGTTGAAGCACGCATGTATTTGATTCAACATCTGGAT
AGGATTGGGCATTAA

Upstream 100 bases:

>100_bases
TCCATTTTTTGATCTTCTCCACAAGCCGTGTAGCAACTCAGAACTTATTCCCCTTTGCAGTTTCTCAATTATATCAATCA
TATTTTAACTGACGCTATTT

Downstream 100 bases:

>100_bases
TGGAAGGTTCTAGGAATAGAAGGTTCTAGGCCCTAGGAAAAGCAGGGAAAGGCTAAGACGATAATAGCCGAACGGCCTGC
GGCCTAGAGAACGTGACTAC

Product: 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MSFIESLTLALALTYSVSLLYWSGKKWGAFATGGLITGAIISSLYWPLIAALGIAVIGIAIGRKFQPTVAQGELRANHMR
DGVQHLLALSMLLVGVQFTVNSALLKAGITPWLMRPDVGDAFLPIAGGIEIKAIISLGIWDQNHPAAAVMLTVVLLTGLL
CKRAFCGWACPLGLAGEYLYKLRKRFIKQELLPPAWIDWPLRMLKYLLLLALLYIVLGMPTMSIPGYLNSNYHKIADLKM
ALFFITPGLVTLICFGIILGLAAWRRQGFCRYICPYGALLGLLSFLSPLKIRRSTQHCLIESKGMNCDKCSRACPANISV
HNQINIRSDECQACMRCISACPKKEALHFSTRNGWKLSARGLTIMLFAIMFLLPLFAYLGGFWHSETPVEARMYLIQHLD
RIGH

Sequences:

>Translated_404_residues
MSFIESLTLALALTYSVSLLYWSGKKWGAFATGGLITGAIISSLYWPLIAALGIAVIGIAIGRKFQPTVAQGELRANHMR
DGVQHLLALSMLLVGVQFTVNSALLKAGITPWLMRPDVGDAFLPIAGGIEIKAIISLGIWDQNHPAAAVMLTVVLLTGLL
CKRAFCGWACPLGLAGEYLYKLRKRFIKQELLPPAWIDWPLRMLKYLLLLALLYIVLGMPTMSIPGYLNSNYHKIADLKM
ALFFITPGLVTLICFGIILGLAAWRRQGFCRYICPYGALLGLLSFLSPLKIRRSTQHCLIESKGMNCDKCSRACPANISV
HNQINIRSDECQACMRCISACPKKEALHFSTRNGWKLSARGLTIMLFAIMFLLPLFAYLGGFWHSETPVEARMYLIQHLD
RIGH
>Mature_403_residues
SFIESLTLALALTYSVSLLYWSGKKWGAFATGGLITGAIISSLYWPLIAALGIAVIGIAIGRKFQPTVAQGELRANHMRD
GVQHLLALSMLLVGVQFTVNSALLKAGITPWLMRPDVGDAFLPIAGGIEIKAIISLGIWDQNHPAAAVMLTVVLLTGLLC
KRAFCGWACPLGLAGEYLYKLRKRFIKQELLPPAWIDWPLRMLKYLLLLALLYIVLGMPTMSIPGYLNSNYHKIADLKMA
LFFITPGLVTLICFGIILGLAAWRRQGFCRYICPYGALLGLLSFLSPLKIRRSTQHCLIESKGMNCDKCSRACPANISVH
NQINIRSDECQACMRCISACPKKEALHFSTRNGWKLSARGLTIMLFAIMFLLPLFAYLGGFWHSETPVEARMYLIQHLDR
IGH

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=352, Percent_Identity=34.0909090909091, Blast_Score=207, Evalue=9e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44744; Mature: 44613

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFIESLTLALALTYSVSLLYWSGKKWGAFATGGLITGAIISSLYWPLIAALGIAVIGIA
CCHHHHHHHHHHHHHHHEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGRKFQPTVAQGELRANHMRDGVQHLLALSMLLVGVQFTVNSALLKAGITPWLMRPDVGD
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC
AFLPIAGGIEIKAIISLGIWDQNHPAAAVMLTVVLLTGLLCKRAFCGWACPLGLAGEYLY
CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
KLRKRFIKQELLPPAWIDWPLRMLKYLLLLALLYIVLGMPTMSIPGYLNSNYHKIADLKM
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
ALFFITPGLVTLICFGIILGLAAWRRQGFCRYICPYGALLGLLSFLSPLKIRRSTQHCLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESKGMNCDKCSRACPANISVHNQINIRSDECQACMRCISACPKKEALHFSTRNGWKLSAR
CCCCCCHHHHHCCCCCCCEECCEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECC
GLTIMLFAIMFLLPLFAYLGGFWHSETPVEARMYLIQHLDRIGH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFIESLTLALALTYSVSLLYWSGKKWGAFATGGLITGAIISSLYWPLIAALGIAVIGIA
CHHHHHHHHHHHHHHHEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGRKFQPTVAQGELRANHMRDGVQHLLALSMLLVGVQFTVNSALLKAGITPWLMRPDVGD
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC
AFLPIAGGIEIKAIISLGIWDQNHPAAAVMLTVVLLTGLLCKRAFCGWACPLGLAGEYLY
CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
KLRKRFIKQELLPPAWIDWPLRMLKYLLLLALLYIVLGMPTMSIPGYLNSNYHKIADLKM
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
ALFFITPGLVTLICFGIILGLAAWRRQGFCRYICPYGALLGLLSFLSPLKIRRSTQHCLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESKGMNCDKCSRACPANISVHNQINIRSDECQACMRCISACPKKEALHFSTRNGWKLSAR
CCCCCCHHHHHCCCCCCCEECCEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECC
GLTIMLFAIMFLLPLFAYLGGFWHSETPVEARMYLIQHLDRIGH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]