| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963722
Identifier: 157963722
GI number: 157963722
Start: 4756373
End: 4757020
Strand: Direct
Name: 157963722
Synonym: Spea_3911
Alternate gene names: NA
Gene position: 4756373-4757020 (Clockwise)
Preceding gene: 157963721
Following gene: 157963723
Centisome position: 91.92
GC content: 45.52
Gene sequence:
>648_bases ATGAAAAAATTGATCACCAGCGCCATTGTTGGCACTAGCCTACTGCTTGGTGGCTGCCAGAGCGCTTATTACGGTGCGAT GGAAAAAGTGGGTTATCACAAGCGCGATATCATGGTCGATCGCGTCGAAGATGCTAAAGAGTCGCAAGAAGAAGCCCAAG AGCAGTTCAGCTCTGCACTGGAAGAGATGCAGGCGCTGCTAAATCATGATGGTGGCGATTTAGAAGGAGCTTACAACAAA GCAAAAGATGAATATGAGTCGGCGCAAGATGCCGCCGATGATGTCACCAATCGCATCGACAAGGTAGAAGATGTTGCCGA GGCATTATTTGACGAGTGGCAAACAGAGATAGGTGAGATCAGCAAAGCCAGCTTGCGTCGTAATAGTGAGTCAAAACTCA AAGAGACTCGCCGTTCATACTCTCAGCTTGTTAAAAGCATGCGCCGCGCAGAAAGTAAGATGGAACCAGTGCTAACTGCG ATGAAAGATAACATGTTGTATCTAAAGCATAACCTTAACGCTCAAGCTATTGGGGCGATTAAGGGGGAGTTCGCGAGCCT ACAGACTGATATCTCAGGCTTAATCAAAGAGATGAATAAGTCTATTGATGAATCGAACAAGTTTATCGCTTCGTTAGAAA ATAAATAA
Upstream 100 bases:
>100_bases CATATTTTTAATTATCGCAATACCTTTACACATTTGGTGCATTATTGACGCAGCAAGATACCGTGCGTAGTCACTCACTA AATTTTAGGGATAAAACCAG
Downstream 100 bases:
>100_bases GCAGCATCTAAAGTGCGGTTCCTAAGCGTGAACGCTCAGGAACCAAACTTGTGATCTACTGCTGCCTTTTTCCATATCAC AATTCCATTTTTTGATCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; ATPase; Glutamine Synthetase
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MKKLITSAIVGTSLLLGGCQSAYYGAMEKVGYHKRDIMVDRVEDAKESQEEAQEQFSSALEEMQALLNHDGGDLEGAYNK AKDEYESAQDAADDVTNRIDKVEDVAEALFDEWQTEIGEISKASLRRNSESKLKETRRSYSQLVKSMRRAESKMEPVLTA MKDNMLYLKHNLNAQAIGAIKGEFASLQTDISGLIKEMNKSIDESNKFIASLENK
Sequences:
>Translated_215_residues MKKLITSAIVGTSLLLGGCQSAYYGAMEKVGYHKRDIMVDRVEDAKESQEEAQEQFSSALEEMQALLNHDGGDLEGAYNK AKDEYESAQDAADDVTNRIDKVEDVAEALFDEWQTEIGEISKASLRRNSESKLKETRRSYSQLVKSMRRAESKMEPVLTA MKDNMLYLKHNLNAQAIGAIKGEFASLQTDISGLIKEMNKSIDESNKFIASLENK >Mature_215_residues MKKLITSAIVGTSLLLGGCQSAYYGAMEKVGYHKRDIMVDRVEDAKESQEEAQEQFSSALEEMQALLNHDGGDLEGAYNK AKDEYESAQDAADDVTNRIDKVEDVAEALFDEWQTEIGEISKASLRRNSESKLKETRRSYSQLVKSMRRAESKMEPVLTA MKDNMLYLKHNLNAQAIGAIKGEFASLQTDISGLIKEMNKSIDESNKFIASLENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24042; Mature: 24042
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLITSAIVGTSLLLGGCQSAYYGAMEKVGYHKRDIMVDRVEDAKESQEEAQEQFSSAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEMQALLNHDGGDLEGAYNKAKDEYESAQDAADDVTNRIDKVEDVAEALFDEWQTEIGEI HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKASLRRNSESKLKETRRSYSQLVKSMRRAESKMEPVLTAMKDNMLYLKHNLNAQAIGAI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHH KGEFASLQTDISGLIKEMNKSIDESNKFIASLENK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLITSAIVGTSLLLGGCQSAYYGAMEKVGYHKRDIMVDRVEDAKESQEEAQEQFSSAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEMQALLNHDGGDLEGAYNKAKDEYESAQDAADDVTNRIDKVEDVAEALFDEWQTEIGEI HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKASLRRNSESKLKETRRSYSQLVKSMRRAESKMEPVLTAMKDNMLYLKHNLNAQAIGAI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHH KGEFASLQTDISGLIKEMNKSIDESNKFIASLENK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA