| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is fabG [H]
Identifier: 157963713
GI number: 157963713
Start: 4749217
End: 4749942
Strand: Direct
Name: fabG [H]
Synonym: Spea_3902
Alternate gene names: 157963713
Gene position: 4749217-4749942 (Clockwise)
Preceding gene: 157963712
Following gene: 157963714
Centisome position: 91.78
GC content: 49.72
Gene sequence:
>726_bases ATGACCAAAAGAGTATTAATCACAGGCTCAAGCCGCGGCATAGGCAAGGCCATTGCTCTGAAGTTGGCCGCCTCTGGCTT TGATATTGCGATGCATTTTCATAGTAATCAAATCGCAGCCGATGCCACTAAGGCAGAGCTTCAACAGCTTGGTATCAAGG TCAGCTGTCTGCAGTTTGATATCGCCGCCAGAGCCGCGGTAAAGCAAGCGATTGAACAAGATATCGAGCAACACGGCGCA TACTATGGCGTGGTGCTCAATGCCGGCATCAATGCCGATACAGCCTTCCCTGCGATGACCGAATCCGAATGGGACAGCGT CGTTCATACCAACTTAGATGGGTTCTATAACGTTATTCATCCGACTGTGATGCCTATGGTGCAAGGTCGTCAAGGCGGGC GGATCATTACCCTAGCGTCGGTATCTGGTATTGCCGGTAACCGTGGTCAAGTGAACTACAGCGCATCTAAAGCCGGTATT ATCGGCGCAACTAAGGCGCTGTCTTTGGAGCTAGCTAAGCGAAAAATTACCGTAAACTGCATCGCACCGGGTCTTATCGA GACCGACATGGTCAGTGATATTCCCAAAGAGATGGTCAATACTATCGTACCTATGCGCCGCATGGGTAAGCCATCTGAAA TTGCAGGTTTGGCCAATTACTTGATGTCAGAAGATGCCGCCTATATCACTCGCCAAGTGATCTCGGTTAATGGAGGCATG ATATGA
Upstream 100 bases:
>100_bases TATTGCCGGAACGACCGACTGATAAATTGACAAGACACAGCCGTAGCACCAAACATAACAACGTTTTCCAGAACAAGGCG GCTACGCAGGGAGTAACAGT
Downstream 100 bases:
>100_bases GCCAAGCGTCTTTTCCCCGTCGCGTCGTGATCACAGGTATTGGCGGTATTTCGGCTCTAGGGCATGACTGGCCAACGATT GCTGAGAGCTTAAAAGCGAA
Product: 3-ketoacyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTKRVLITGSSRGIGKAIALKLAASGFDIAMHFHSNQIAADATKAELQQLGIKVSCLQFDIAARAAVKQAIEQDIEQHGA YYGVVLNAGINADTAFPAMTESEWDSVVHTNLDGFYNVIHPTVMPMVQGRQGGRIITLASVSGIAGNRGQVNYSASKAGI IGATKALSLELAKRKITVNCIAPGLIETDMVSDIPKEMVNTIVPMRRMGKPSEIAGLANYLMSEDAAYITRQVISVNGGM I
Sequences:
>Translated_241_residues MTKRVLITGSSRGIGKAIALKLAASGFDIAMHFHSNQIAADATKAELQQLGIKVSCLQFDIAARAAVKQAIEQDIEQHGA YYGVVLNAGINADTAFPAMTESEWDSVVHTNLDGFYNVIHPTVMPMVQGRQGGRIITLASVSGIAGNRGQVNYSASKAGI IGATKALSLELAKRKITVNCIAPGLIETDMVSDIPKEMVNTIVPMRRMGKPSEIAGLANYLMSEDAAYITRQVISVNGGM I >Mature_240_residues TKRVLITGSSRGIGKAIALKLAASGFDIAMHFHSNQIAADATKAELQQLGIKVSCLQFDIAARAAVKQAIEQDIEQHGAY YGVVLNAGINADTAFPAMTESEWDSVVHTNLDGFYNVIHPTVMPMVQGRQGGRIITLASVSGIAGNRGQVNYSASKAGII GATKALSLELAKRKITVNCIAPGLIETDMVSDIPKEMVNTIVPMRRMGKPSEIAGLANYLMSEDAAYITRQVISVNGGMI
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=35.2697095435685, Blast_Score=135, Evalue=3e-32, Organism=Homo sapiens, GI15277342, Length=247, Percent_Identity=34.0080971659919, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI32483357, Length=243, Percent_Identity=31.6872427983539, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI126723750, Length=247, Percent_Identity=29.5546558704453, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI5031737, Length=242, Percent_Identity=28.9256198347107, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI4504505, Length=228, Percent_Identity=30.7017543859649, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI19923817, Length=245, Percent_Identity=26.9387755102041, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI66933014, Length=216, Percent_Identity=27.3148148148148, Blast_Score=81, Evalue=7e-16, Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=30.6878306878307, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI4758504, Length=248, Percent_Identity=29.8387096774194, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI59889578, Length=190, Percent_Identity=29.4736842105263, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI31542939, Length=203, Percent_Identity=30.5418719211823, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI4503301, Length=210, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI126723191, Length=180, Percent_Identity=27.7777777777778, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI10190704, Length=243, Percent_Identity=27.1604938271605, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI210032110, Length=196, Percent_Identity=27.5510204081633, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI83715985, Length=248, Percent_Identity=27.8225806451613, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=39.4190871369295, Blast_Score=157, Evalue=7e-40, Organism=Escherichia coli, GI1788459, Length=245, Percent_Identity=36.3265306122449, Blast_Score=133, Evalue=8e-33, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=35.5102040816327, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI87082100, Length=250, Percent_Identity=32.8, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=29.9595141700405, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1789208, Length=245, Percent_Identity=27.7551020408163, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI2367365, Length=242, Percent_Identity=29.7520661157025, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI87082160, Length=245, Percent_Identity=28.1632653061224, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1787905, Length=242, Percent_Identity=29.7520661157025, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789378, Length=249, Percent_Identity=26.9076305220884, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=28.2352941176471, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789057, Length=260, Percent_Identity=23.8461538461538, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1786701, Length=196, Percent_Identity=26.0204081632653, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI25147288, Length=240, Percent_Identity=35, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17555706, Length=243, Percent_Identity=32.5102880658436, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=29.9595141700405, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=31.6, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=28.2258064516129, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17568967, Length=234, Percent_Identity=28.6324786324786, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17538182, Length=250, Percent_Identity=28.4, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17564282, Length=192, Percent_Identity=29.6875, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=25.8823529411765, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17562904, Length=259, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=27.6923076923077, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17536025, Length=247, Percent_Identity=23.4817813765182, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17508651, Length=251, Percent_Identity=24.7011952191235, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=228, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6324126, Length=186, Percent_Identity=28.494623655914, Blast_Score=73, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323882, Length=194, Percent_Identity=34.020618556701, Blast_Score=72, Evalue=7e-14, Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=33.6065573770492, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=32.1285140562249, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=29.6, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=27.6422764227642, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=29.6747967479675, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI28571526, Length=246, Percent_Identity=26.4227642276423, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=28.3464566929134, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI18859837, Length=227, Percent_Identity=29.9559471365639, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=25.5905511811024, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR011285 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25618; Mature: 25487
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRVLITGSSRGIGKAIALKLAASGFDIAMHFHSNQIAADATKAELQQLGIKVSCLQFD CCCEEEEECCCCCCCHHHEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEHH IAARAAVKQAIEQDIEQHGAYYGVVLNAGINADTAFPAMTESEWDSVVHTNLDGFYNVIH HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH PTVMPMVQGRQGGRIITLASVSGIAGNRGQVNYSASKAGIIGATKALSLELAKRKITVNC HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCEEEHHHHHHHEEHHHEEEEEE IAPGLIETDMVSDIPKEMVNTIVPMRRMGKPSEIAGLANYLMSEDAAYITRQVISVNGGM ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCC I C >Mature Secondary Structure TKRVLITGSSRGIGKAIALKLAASGFDIAMHFHSNQIAADATKAELQQLGIKVSCLQFD CCEEEEECCCCCCCHHHEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEHH IAARAAVKQAIEQDIEQHGAYYGVVLNAGINADTAFPAMTESEWDSVVHTNLDGFYNVIH HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH PTVMPMVQGRQGGRIITLASVSGIAGNRGQVNYSASKAGIIGATKALSLELAKRKITVNC HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCEEEHHHHHHHEEHHHEEEEEE IAPGLIETDMVSDIPKEMVNTIVPMRRMGKPSEIAGLANYLMSEDAAYITRQVISVNGGM ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9020051 [H]