| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963708
Identifier: 157963708
GI number: 157963708
Start: 4742972
End: 4745386
Strand: Direct
Name: 157963708
Synonym: Spea_3897
Alternate gene names: NA
Gene position: 4742972-4745386 (Clockwise)
Preceding gene: 157963707
Following gene: 157963709
Centisome position: 91.66
GC content: 49.9
Gene sequence:
>2415_bases ATGAACTCCCTTTTGAGTCGTTGCTTAAGCCAAACCAGTAGCAAATTAAGATTTGCCCTCTGGCTCGCTCTCATTGGCAT CACGCTAATGACGGGCTGTATGTTGTGGCAAAACGGCGCAAAAGTGCAAAGCGACATTCTCGCCATGCTTCCCAAGGTCA ACGAAAGCCCTATGACCCAGCGCGCCATGGCGCAGGTCGAGCAGCAATTAGCCAATCGTGTCTATCTAGGTTTTGTCAGT GATAGCCAACAAGCAGCAATCGATGCCGCCAAGCTGACAATGAAATCGCTGCAGCGAGATAACGCAAGCGCCTTTGTCGA TATTAGTAGCGCCGATATGGCACAAGCCGAGGCGCTAAACAGTTACTATTTTAAACATAGATTTCAGCTACTCACCGAAA AGCAGCAACGCCTGCTACAGCAAGGCCAGTGGCAACAGCTCACTCAAGCGGCATTAGAAAAACTCTATAACGCCTTTAGC TATGCTAACAGCAGCCTGCTGAGCCATGATCCCCTATTGCTTTACCCAGACTCCTTGATGGCGCTCGCACCGTCACAACA GTTAACGGTAAAACAGGGAGTGTTACTTGCCACTGTTGCGCCCTCGGCAAGTGAGCCACAGCCACGCTTTGCCGCTATCG TGATGGCAAAAGGCAGTGACAGCGCCTTTAATCCCAAGGCACAACAGAGCCAGCTCGCGGCGCTACAAACGGCTTTTCAT TCGGTAAACCAGCAAGACGCTGACATCGAAATTATCAAAGCTGGCGCGCTATTTCACGCCGCTGCTGCGACCGAGAACGC TAAACAAGAAGTCTCCAGCATAGGGCTACTATCCCTTATCGGCGTCATCACCTTAGTCTGGCTAGCATTTCGATCGTTCA TGCCGCTGACCATTGCCGTCATCACCGTCAGCACCAGCTTGCTATTTGCCGTTGTCATGACCACCCTACTCTTTGGTGAG CTGCATCTGCTAACACTGGTGTTTGGTACCAGCCTTATCGGGATCTCGATCGACTACTGTTTTCACTATTATTGCGAGCG CTTACACCACCCTAGCGATAGCAGCGAAAAAGTCATTCAAAAAATTTTTGCAGCGATCACCTTGGCACTTGTCACCAGCG TCATCGCCTATAGCGCAATAGGGATCGCCCCCTTCCCCGGCATGCAGCAGGTCGCCGTATTCTGTGCCTCGGGTTTAGTC GGCGCCTACTTGACCTTATTGCTAGCCTACCCAACCCTAGCAGCGCGTCCACTCAAAGAGGCCAACACGGCACTTAACTT AGCCAGCCAATATCAAGCCTTTATGCTAAATCGAGCTCTACCGACAAAGCCTGTTACTCGATTATTGCTAGCTGTGTGCA GTATTGGATTTATCGGCATCGGCATAAGCCAACTCACGGCAAATGATGATATCCGCCAGTTGCAGCACACACCGAGTGAT ATTCAAGCCGAGGAAGACCAGCTGCGCACCTTGCTGAGTGGCGGCACCGATAATCAGTTTCTGTTAGTCACGGCGACATC AGAAGAGCGGCTTTTGCAGCAACTCACAGCACTTGAACCGATATTAGAGCGCGCCGAGCAAGATAAGCTATTGGGTAATC ATTTAAGTCTGAGCCGCTTCTTGCCAAGCCAGCAGACTCAAGAGCAGCACTATCAGTTACAAGCTCAGATCTATCTTGAG CACTTAGATGAGATTATTGCCACTCTAGGTCTAGATCCAGATATTAAGGCGACACTCATCGCCCAATACCGCGACGCTCA CAACAAGTTTATCACTGCCGATAGTTTCTTAGGCCATCAAGCTGGCGTGAGCTTTAAACCGCTGTGGCTATCACCACAAT CAGATGAAGACCAAGGCTATGGCGCAATCGTATTACTTGGCGGCATAAAGCAGCTCGATGCCCTTGCCCAGTTATTTGCA GCTAATAGTCAGGTTCAACTCGTCGATAAAGTTGGCGATATCTCCACCGTGATGGGGCATTACCGACAGCTCACCTTAGG CTTACTCGCTTTGGCCCTGCTAGTTGCAGGCATCATTTTCACCTTTAGATTTGGCGCAAAACTCGCGGCTATCGTAGTAG CCGTACCGGCTTTATCGGCCCTGCTGACCTTGGCCTGCTTAGGCATCACGCATAATCCACTCACTCTGTTTCATGCACTA GCACTTATCTTAGTATTTGGCATTGGTGTCGATTACAGCCTATTTTTTGCCGAGTCTAAGCAACAGACTCGCGGGGTGAT GATGGCAGTATTTATGTCGGCTGTTTCGACCTTGCTCGCATTTGGCCTGCTTGCCTTTAGCCAAACTCCAGCGATTAATG CCTTTGGCTTAACCCTGTTACTGGGGATTAGTTTTACCTTTTTGCTCTCGCCCTTTATTCAAATTTTTACAAGGAAGTCC GTTAATGCCAACTGA
Upstream 100 bases:
>100_bases GCGATAAGGCACGTTTTAGCCCTTCAAAACCGCTTGAACCAGACGCGGCAGTGACTCCAGTAAATATAGACGCTCAGCTC AGTGAGAGTAAACAGCCATA
Downstream 100 bases:
>100_bases TAAAGCTGTTCAGAATGAGTTTGAAACGGATGCCTGTGAAAGCATCGATGTCGCCATTATTGGAGCAGGCCCTTCGGGCA GCATCGCCGCCAGCTTGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 804; Mature: 804
Protein sequence:
>804_residues MNSLLSRCLSQTSSKLRFALWLALIGITLMTGCMLWQNGAKVQSDILAMLPKVNESPMTQRAMAQVEQQLANRVYLGFVS DSQQAAIDAAKLTMKSLQRDNASAFVDISSADMAQAEALNSYYFKHRFQLLTEKQQRLLQQGQWQQLTQAALEKLYNAFS YANSSLLSHDPLLLYPDSLMALAPSQQLTVKQGVLLATVAPSASEPQPRFAAIVMAKGSDSAFNPKAQQSQLAALQTAFH SVNQQDADIEIIKAGALFHAAAATENAKQEVSSIGLLSLIGVITLVWLAFRSFMPLTIAVITVSTSLLFAVVMTTLLFGE LHLLTLVFGTSLIGISIDYCFHYYCERLHHPSDSSEKVIQKIFAAITLALVTSVIAYSAIGIAPFPGMQQVAVFCASGLV GAYLTLLLAYPTLAARPLKEANTALNLASQYQAFMLNRALPTKPVTRLLLAVCSIGFIGIGISQLTANDDIRQLQHTPSD IQAEEDQLRTLLSGGTDNQFLLVTATSEERLLQQLTALEPILERAEQDKLLGNHLSLSRFLPSQQTQEQHYQLQAQIYLE HLDEIIATLGLDPDIKATLIAQYRDAHNKFITADSFLGHQAGVSFKPLWLSPQSDEDQGYGAIVLLGGIKQLDALAQLFA ANSQVQLVDKVGDISTVMGHYRQLTLGLLALALLVAGIIFTFRFGAKLAAIVVAVPALSALLTLACLGITHNPLTLFHAL ALILVFGIGVDYSLFFAESKQQTRGVMMAVFMSAVSTLLAFGLLAFSQTPAINAFGLTLLLGISFTFLLSPFIQIFTRKS VNAN
Sequences:
>Translated_804_residues MNSLLSRCLSQTSSKLRFALWLALIGITLMTGCMLWQNGAKVQSDILAMLPKVNESPMTQRAMAQVEQQLANRVYLGFVS DSQQAAIDAAKLTMKSLQRDNASAFVDISSADMAQAEALNSYYFKHRFQLLTEKQQRLLQQGQWQQLTQAALEKLYNAFS YANSSLLSHDPLLLYPDSLMALAPSQQLTVKQGVLLATVAPSASEPQPRFAAIVMAKGSDSAFNPKAQQSQLAALQTAFH SVNQQDADIEIIKAGALFHAAAATENAKQEVSSIGLLSLIGVITLVWLAFRSFMPLTIAVITVSTSLLFAVVMTTLLFGE LHLLTLVFGTSLIGISIDYCFHYYCERLHHPSDSSEKVIQKIFAAITLALVTSVIAYSAIGIAPFPGMQQVAVFCASGLV GAYLTLLLAYPTLAARPLKEANTALNLASQYQAFMLNRALPTKPVTRLLLAVCSIGFIGIGISQLTANDDIRQLQHTPSD IQAEEDQLRTLLSGGTDNQFLLVTATSEERLLQQLTALEPILERAEQDKLLGNHLSLSRFLPSQQTQEQHYQLQAQIYLE HLDEIIATLGLDPDIKATLIAQYRDAHNKFITADSFLGHQAGVSFKPLWLSPQSDEDQGYGAIVLLGGIKQLDALAQLFA ANSQVQLVDKVGDISTVMGHYRQLTLGLLALALLVAGIIFTFRFGAKLAAIVVAVPALSALLTLACLGITHNPLTLFHAL ALILVFGIGVDYSLFFAESKQQTRGVMMAVFMSAVSTLLAFGLLAFSQTPAINAFGLTLLLGISFTFLLSPFIQIFTRKS VNAN >Mature_804_residues MNSLLSRCLSQTSSKLRFALWLALIGITLMTGCMLWQNGAKVQSDILAMLPKVNESPMTQRAMAQVEQQLANRVYLGFVS DSQQAAIDAAKLTMKSLQRDNASAFVDISSADMAQAEALNSYYFKHRFQLLTEKQQRLLQQGQWQQLTQAALEKLYNAFS YANSSLLSHDPLLLYPDSLMALAPSQQLTVKQGVLLATVAPSASEPQPRFAAIVMAKGSDSAFNPKAQQSQLAALQTAFH SVNQQDADIEIIKAGALFHAAAATENAKQEVSSIGLLSLIGVITLVWLAFRSFMPLTIAVITVSTSLLFAVVMTTLLFGE LHLLTLVFGTSLIGISIDYCFHYYCERLHHPSDSSEKVIQKIFAAITLALVTSVIAYSAIGIAPFPGMQQVAVFCASGLV GAYLTLLLAYPTLAARPLKEANTALNLASQYQAFMLNRALPTKPVTRLLLAVCSIGFIGIGISQLTANDDIRQLQHTPSD IQAEEDQLRTLLSGGTDNQFLLVTATSEERLLQQLTALEPILERAEQDKLLGNHLSLSRFLPSQQTQEQHYQLQAQIYLE HLDEIIATLGLDPDIKATLIAQYRDAHNKFITADSFLGHQAGVSFKPLWLSPQSDEDQGYGAIVLLGGIKQLDALAQLFA ANSQVQLVDKVGDISTVMGHYRQLTLGLLALALLVAGIIFTFRFGAKLAAIVVAVPALSALLTLACLGITHNPLTLFHAL ALILVFGIGVDYSLFFAESKQQTRGVMMAVFMSAVSTLLAFGLLAFSQTPAINAFGLTLLLGISFTFLLSPFIQIFTRKS VNAN
Specific function: Unknown
COG id: COG4258
COG function: function code R; Predicted exporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87363; Mature: 87363
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLLSRCLSQTSSKLRFALWLALIGITLMTGCMLWQNGAKVQSDILAMLPKVNESPMTQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHH RAMAQVEQQLANRVYLGFVSDSQQAAIDAAKLTMKSLQRDNASAFVDISSADMAQAEALN HHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH SYYFKHRFQLLTEKQQRLLQQGQWQQLTQAALEKLYNAFSYANSSLLSHDPLLLYPDSLM HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHH ALAPSQQLTVKQGVLLATVAPSASEPQPRFAAIVMAKGSDSAFNPKAQQSQLAALQTAFH HCCCCCCHHHHCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH SVNQQDADIEIIKAGALFHAAAATENAKQEVSSIGLLSLIGVITLVWLAFRSFMPLTIAV HCCCCCCCEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITVSTSLLFAVVMTTLLFGELHLLTLVFGTSLIGISIDYCFHYYCERLHHPSDSSEKVIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH KIFAAITLALVTSVIAYSAIGIAPFPGMQQVAVFCASGLVGAYLTLLLAYPTLAARPLKE HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ANTALNLASQYQAFMLNRALPTKPVTRLLLAVCSIGFIGIGISQLTANDDIRQLQHTPSD HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCCC IQAEEDQLRTLLSGGTDNQFLLVTATSEERLLQQLTALEPILERAEQDKLLGNHLSLSRF CCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LPSQQTQEQHYQLQAQIYLEHLDEIIATLGLDPDIKATLIAQYRDAHNKFITADSFLGHQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEHHHHHCHH AGVSFKPLWLSPQSDEDQGYGAIVLLGGIKQLDALAQLFAANSQVQLVDKVGDISTVMGH CCCCCCEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YRQLTLGLLALALLVAGIIFTFRFGAKLAAIVVAVPALSALLTLACLGITHNPLTLFHAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ALILVFGIGVDYSLFFAESKQQTRGVMMAVFMSAVSTLLAFGLLAFSQTPAINAFGLTLL HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LGISFTFLLSPFIQIFTRKSVNAN HHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNSLLSRCLSQTSSKLRFALWLALIGITLMTGCMLWQNGAKVQSDILAMLPKVNESPMTQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHH RAMAQVEQQLANRVYLGFVSDSQQAAIDAAKLTMKSLQRDNASAFVDISSADMAQAEALN HHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH SYYFKHRFQLLTEKQQRLLQQGQWQQLTQAALEKLYNAFSYANSSLLSHDPLLLYPDSLM HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHH ALAPSQQLTVKQGVLLATVAPSASEPQPRFAAIVMAKGSDSAFNPKAQQSQLAALQTAFH HCCCCCCHHHHCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH SVNQQDADIEIIKAGALFHAAAATENAKQEVSSIGLLSLIGVITLVWLAFRSFMPLTIAV HCCCCCCCEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITVSTSLLFAVVMTTLLFGELHLLTLVFGTSLIGISIDYCFHYYCERLHHPSDSSEKVIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH KIFAAITLALVTSVIAYSAIGIAPFPGMQQVAVFCASGLVGAYLTLLLAYPTLAARPLKE HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH ANTALNLASQYQAFMLNRALPTKPVTRLLLAVCSIGFIGIGISQLTANDDIRQLQHTPSD HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCCC IQAEEDQLRTLLSGGTDNQFLLVTATSEERLLQQLTALEPILERAEQDKLLGNHLSLSRF CCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LPSQQTQEQHYQLQAQIYLEHLDEIIATLGLDPDIKATLIAQYRDAHNKFITADSFLGHQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEHHHHHCHH AGVSFKPLWLSPQSDEDQGYGAIVLLGGIKQLDALAQLFAANSQVQLVDKVGDISTVMGH CCCCCCEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YRQLTLGLLALALLVAGIIFTFRFGAKLAAIVVAVPALSALLTLACLGITHNPLTLFHAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ALILVFGIGVDYSLFFAESKQQTRGVMMAVFMSAVSTLLAFGLLAFSQTPAINAFGLTLL HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LGISFTFLLSPFIQIFTRKSVNAN HHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA