| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963707
Identifier: 157963707
GI number: 157963707
Start: 4742226
End: 4742972
Strand: Direct
Name: 157963707
Synonym: Spea_3896
Alternate gene names: NA
Gene position: 4742226-4742972 (Clockwise)
Preceding gene: 157963706
Following gene: 157963708
Centisome position: 91.64
GC content: 46.59
Gene sequence:
>747_bases ATGAAGTGTTTATTAAGCCTAGCCCTTAGCCTCATGTTGCTGTGTAGCCCTAGCTATGCTGATTCGGACTACAGCGAACT GTTCAGCCAACATGCTAACAGTGCAGAACTAGCAAAGCTTAGCCAACAGCTATCACCTAGTGAGCAGGCAAAGGGGAAGT TTACTCAGAGCCGTTACCTTAAGGTACTGAAAAAGCCTTTGCTCAGTCAGGGCGAATTTATCTTTGCTAAAGATCTTGGG GTGATTTGGCAACAAAATAGCCCCTTCGCCAGCACGCTGATCCTAAAAGATAAGCAACTGATACAGATAGATAGTCAAGG CAATATTAGCGTCAATGATGCCGAGCAAGCAGGCAGCGGCAGTCAAATGAGTGAGGTGATGCCAAAACTGTTAAACGCCC TGTTAAGCGGTGATATTCAACAGCTAGAGCAGCATTTCAACCTCAGCCTAGTGCAAGCTCAAACTGGGGCAGGCGTTAAT CACTGGCAATTAGGATTAAAACCAATAGATCCTATGATCGCCAAGGCCCTACCTAAATTAGTGCTAGTCGGCGATGCGAA GATACAAAGCTTGGTTCTGTTCAGCGCCAACGGCGATCGCAGTGAAATTGCATTTTCAACCATAGATGAACGTCCACTCA GCTCAAGCGATAAGGCACGTTTTAGCCCTTCAAAACCGCTTGAACCAGACGCGGCAGTGACTCCAGTAAATATAGACGCT CAGCTCAGTGAGAGTAAACAGCCATAA
Upstream 100 bases:
>100_bases ACATGCAGACTCAAGAGCTGTGCTTTGTCACGCCTGAAGTGTTTCAGCAAAAAGTTGCCCACTTGCTTCCCCAAACACAT AGCAAAACAGAGCAAGTCGG
Downstream 100 bases:
>100_bases TGAACTCCCTTTTGAGTCGTTGCTTAAGCCAAACCAGTAGCAAATTAAGATTTGCCCTCTGGCTCGCTCTCATTGGCATC ACGCTAATGACGGGCTGTAT
Product: outer membrane lipoprotein carrier protein LolA
Products: NA
Alternate protein names: Signal Peptide Protein; Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Protein; Outer Membrane Lipocarrier Protein LolA Family Protein; Outer Membrane Lipoprotein Carrier Protein; Exported Lipoprotein; Secreted Protein
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKCLLSLALSLMLLCSPSYADSDYSELFSQHANSAELAKLSQQLSPSEQAKGKFTQSRYLKVLKKPLLSQGEFIFAKDLG VIWQQNSPFASTLILKDKQLIQIDSQGNISVNDAEQAGSGSQMSEVMPKLLNALLSGDIQQLEQHFNLSLVQAQTGAGVN HWQLGLKPIDPMIAKALPKLVLVGDAKIQSLVLFSANGDRSEIAFSTIDERPLSSSDKARFSPSKPLEPDAAVTPVNIDA QLSESKQP
Sequences:
>Translated_248_residues MKCLLSLALSLMLLCSPSYADSDYSELFSQHANSAELAKLSQQLSPSEQAKGKFTQSRYLKVLKKPLLSQGEFIFAKDLG VIWQQNSPFASTLILKDKQLIQIDSQGNISVNDAEQAGSGSQMSEVMPKLLNALLSGDIQQLEQHFNLSLVQAQTGAGVN HWQLGLKPIDPMIAKALPKLVLVGDAKIQSLVLFSANGDRSEIAFSTIDERPLSSSDKARFSPSKPLEPDAAVTPVNIDA QLSESKQP >Mature_248_residues MKCLLSLALSLMLLCSPSYADSDYSELFSQHANSAELAKLSQQLSPSEQAKGKFTQSRYLKVLKKPLLSQGEFIFAKDLG VIWQQNSPFASTLILKDKQLIQIDSQGNISVNDAEQAGSGSQMSEVMPKLLNALLSGDIQQLEQHFNLSLVQAQTGAGVN HWQLGLKPIDPMIAKALPKLVLVGDAKIQSLVLFSANGDRSEIAFSTIDERPLSSSDKARFSPSKPLEPDAAVTPVNIDA QLSESKQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26910; Mature: 26910
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCLLSLALSLMLLCSPSYADSDYSELFSQHANSAELAKLSQQLSPSEQAKGKFTQSRYL CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH KVLKKPLLSQGEFIFAKDLGVIWQQNSPFASTLILKDKQLIQIDSQGNISVNDAEQAGSG HHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEEECCCEEEEECCCCCEEECCHHHCCCC SQMSEVMPKLLNALLSGDIQQLEQHFNLSLVQAQTGAGVNHWQLGLKPIDPMIAKALPKL CHHHHHHHHHHHHHHCCHHHHHHHHHCEEEEEECCCCCCCEEECCCCCCCHHHHHHCCCE VLVGDAKIQSLVLFSANGDRSEIAFSTIDERPLSSSDKARFSPSKPLEPDAAVTPVNIDA EEECCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH QLSESKQP HCCCCCCC >Mature Secondary Structure MKCLLSLALSLMLLCSPSYADSDYSELFSQHANSAELAKLSQQLSPSEQAKGKFTQSRYL CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH KVLKKPLLSQGEFIFAKDLGVIWQQNSPFASTLILKDKQLIQIDSQGNISVNDAEQAGSG HHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEEECCCEEEEECCCCCEEECCHHHCCCC SQMSEVMPKLLNALLSGDIQQLEQHFNLSLVQAQTGAGVNHWQLGLKPIDPMIAKALPKL CHHHHHHHHHHHHHHCCHHHHHHHHHCEEEEEECCCCCCCEEECCCCCCCHHHHHHCCCE VLVGDAKIQSLVLFSANGDRSEIAFSTIDERPLSSSDKARFSPSKPLEPDAAVTPVNIDA EEECCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH QLSESKQP HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA