Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963707

Identifier: 157963707

GI number: 157963707

Start: 4742226

End: 4742972

Strand: Direct

Name: 157963707

Synonym: Spea_3896

Alternate gene names: NA

Gene position: 4742226-4742972 (Clockwise)

Preceding gene: 157963706

Following gene: 157963708

Centisome position: 91.64

GC content: 46.59

Gene sequence:

>747_bases
ATGAAGTGTTTATTAAGCCTAGCCCTTAGCCTCATGTTGCTGTGTAGCCCTAGCTATGCTGATTCGGACTACAGCGAACT
GTTCAGCCAACATGCTAACAGTGCAGAACTAGCAAAGCTTAGCCAACAGCTATCACCTAGTGAGCAGGCAAAGGGGAAGT
TTACTCAGAGCCGTTACCTTAAGGTACTGAAAAAGCCTTTGCTCAGTCAGGGCGAATTTATCTTTGCTAAAGATCTTGGG
GTGATTTGGCAACAAAATAGCCCCTTCGCCAGCACGCTGATCCTAAAAGATAAGCAACTGATACAGATAGATAGTCAAGG
CAATATTAGCGTCAATGATGCCGAGCAAGCAGGCAGCGGCAGTCAAATGAGTGAGGTGATGCCAAAACTGTTAAACGCCC
TGTTAAGCGGTGATATTCAACAGCTAGAGCAGCATTTCAACCTCAGCCTAGTGCAAGCTCAAACTGGGGCAGGCGTTAAT
CACTGGCAATTAGGATTAAAACCAATAGATCCTATGATCGCCAAGGCCCTACCTAAATTAGTGCTAGTCGGCGATGCGAA
GATACAAAGCTTGGTTCTGTTCAGCGCCAACGGCGATCGCAGTGAAATTGCATTTTCAACCATAGATGAACGTCCACTCA
GCTCAAGCGATAAGGCACGTTTTAGCCCTTCAAAACCGCTTGAACCAGACGCGGCAGTGACTCCAGTAAATATAGACGCT
CAGCTCAGTGAGAGTAAACAGCCATAA

Upstream 100 bases:

>100_bases
ACATGCAGACTCAAGAGCTGTGCTTTGTCACGCCTGAAGTGTTTCAGCAAAAAGTTGCCCACTTGCTTCCCCAAACACAT
AGCAAAACAGAGCAAGTCGG

Downstream 100 bases:

>100_bases
TGAACTCCCTTTTGAGTCGTTGCTTAAGCCAAACCAGTAGCAAATTAAGATTTGCCCTCTGGCTCGCTCTCATTGGCATC
ACGCTAATGACGGGCTGTAT

Product: outer membrane lipoprotein carrier protein LolA

Products: NA

Alternate protein names: Signal Peptide Protein; Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Protein; Outer Membrane Lipocarrier Protein LolA Family Protein; Outer Membrane Lipoprotein Carrier Protein; Exported Lipoprotein; Secreted Protein

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKCLLSLALSLMLLCSPSYADSDYSELFSQHANSAELAKLSQQLSPSEQAKGKFTQSRYLKVLKKPLLSQGEFIFAKDLG
VIWQQNSPFASTLILKDKQLIQIDSQGNISVNDAEQAGSGSQMSEVMPKLLNALLSGDIQQLEQHFNLSLVQAQTGAGVN
HWQLGLKPIDPMIAKALPKLVLVGDAKIQSLVLFSANGDRSEIAFSTIDERPLSSSDKARFSPSKPLEPDAAVTPVNIDA
QLSESKQP

Sequences:

>Translated_248_residues
MKCLLSLALSLMLLCSPSYADSDYSELFSQHANSAELAKLSQQLSPSEQAKGKFTQSRYLKVLKKPLLSQGEFIFAKDLG
VIWQQNSPFASTLILKDKQLIQIDSQGNISVNDAEQAGSGSQMSEVMPKLLNALLSGDIQQLEQHFNLSLVQAQTGAGVN
HWQLGLKPIDPMIAKALPKLVLVGDAKIQSLVLFSANGDRSEIAFSTIDERPLSSSDKARFSPSKPLEPDAAVTPVNIDA
QLSESKQP
>Mature_248_residues
MKCLLSLALSLMLLCSPSYADSDYSELFSQHANSAELAKLSQQLSPSEQAKGKFTQSRYLKVLKKPLLSQGEFIFAKDLG
VIWQQNSPFASTLILKDKQLIQIDSQGNISVNDAEQAGSGSQMSEVMPKLLNALLSGDIQQLEQHFNLSLVQAQTGAGVN
HWQLGLKPIDPMIAKALPKLVLVGDAKIQSLVLFSANGDRSEIAFSTIDERPLSSSDKARFSPSKPLEPDAAVTPVNIDA
QLSESKQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26910; Mature: 26910

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCLLSLALSLMLLCSPSYADSDYSELFSQHANSAELAKLSQQLSPSEQAKGKFTQSRYL
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
KVLKKPLLSQGEFIFAKDLGVIWQQNSPFASTLILKDKQLIQIDSQGNISVNDAEQAGSG
HHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEEECCCEEEEECCCCCEEECCHHHCCCC
SQMSEVMPKLLNALLSGDIQQLEQHFNLSLVQAQTGAGVNHWQLGLKPIDPMIAKALPKL
CHHHHHHHHHHHHHHCCHHHHHHHHHCEEEEEECCCCCCCEEECCCCCCCHHHHHHCCCE
VLVGDAKIQSLVLFSANGDRSEIAFSTIDERPLSSSDKARFSPSKPLEPDAAVTPVNIDA
EEECCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
QLSESKQP
HCCCCCCC
>Mature Secondary Structure
MKCLLSLALSLMLLCSPSYADSDYSELFSQHANSAELAKLSQQLSPSEQAKGKFTQSRYL
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
KVLKKPLLSQGEFIFAKDLGVIWQQNSPFASTLILKDKQLIQIDSQGNISVNDAEQAGSG
HHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEEECCCEEEEECCCCCEEECCHHHCCCC
SQMSEVMPKLLNALLSGDIQQLEQHFNLSLVQAQTGAGVNHWQLGLKPIDPMIAKALPKL
CHHHHHHHHHHHHHHCCHHHHHHHHHCEEEEEECCCCCCCEEECCCCCCCHHHHHHCCCE
VLVGDAKIQSLVLFSANGDRSEIAFSTIDERPLSSSDKARFSPSKPLEPDAAVTPVNIDA
EEECCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
QLSESKQP
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA