| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963701
Identifier: 157963701
GI number: 157963701
Start: 4736157
End: 4736705
Strand: Direct
Name: 157963701
Synonym: Spea_3890
Alternate gene names: NA
Gene position: 4736157-4736705 (Clockwise)
Preceding gene: 157963700
Following gene: 157963702
Centisome position: 91.53
GC content: 47.36
Gene sequence:
>549_bases ATGCGACTCTTTCTGCAAATAGTGACGACCATAGTGGTGATAGCTTATCCACTGGCGGTGTATTTTGGTCTGCACTATTT GCCTGCAGGCAGTATCGCGCTCGCCTTATGCGCCATTTTAGTCATACGGCTATTGTTGCAGCAGCAAAAAGTGAAGGCGT TAATGTTGCCTATCCTAGTCGGAATAGGTCTCACCGCCGGAAGCTTTATCGCGAAAGAGAATAACTGGTTACTCTTCTAC CCTGTGGTGATTAACCTCACCATGCTGGGGCTTTTCGGCTATTCACTAAAACGTGGCCCCAGCATGATTGAAAGGCTTGC AAGGCTAAAAGAGCCCGACCTGCCCGATGAAGCTATCGGGTACCTCAATCGCGTCACCTTAATCTGGTGTGGATTATTCA TCTTTAATGGTGCCATGGCGCTTTATACCGCGCTTTACACCAGTATCGAAACATGGACACTTTATAACGGGCTGATTGCC TACTTGCTTATCGGGTCGCTACTGGGTGGCGAATGGTTATACAGAACATTCTGGTTGAAAAAATCATGA
Upstream 100 bases:
>100_bases TACAGCAGATGACAGGTAAGAAAATTAAGCCTGAAGAGTTTAAAGCCGTTAGAACCGTAGATGATGTGGTATCAGCTATC GAAGGCTTAGTTAAAGAGTA
Downstream 100 bases:
>100_bases CGAATCTACTGAAATCTTGGCTATGCCAGGGACCTACTGCTCAGCAGCTAATTAGCTTCAATCACCACGACATTGTGACA GGTTCGGTATTTACCGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRLFLQIVTTIVVIAYPLAVYFGLHYLPAGSIALALCAILVIRLLLQQQKVKALMLPILVGIGLTAGSFIAKENNWLLFY PVVINLTMLGLFGYSLKRGPSMIERLARLKEPDLPDEAIGYLNRVTLIWCGLFIFNGAMALYTALYTSIETWTLYNGLIA YLLIGSLLGGEWLYRTFWLKKS
Sequences:
>Translated_182_residues MRLFLQIVTTIVVIAYPLAVYFGLHYLPAGSIALALCAILVIRLLLQQQKVKALMLPILVGIGLTAGSFIAKENNWLLFY PVVINLTMLGLFGYSLKRGPSMIERLARLKEPDLPDEAIGYLNRVTLIWCGLFIFNGAMALYTALYTSIETWTLYNGLIA YLLIGSLLGGEWLYRTFWLKKS >Mature_182_residues MRLFLQIVTTIVVIAYPLAVYFGLHYLPAGSIALALCAILVIRLLLQQQKVKALMLPILVGIGLTAGSFIAKENNWLLFY PVVINLTMLGLFGYSLKRGPSMIERLARLKEPDLPDEAIGYLNRVTLIWCGLFIFNGAMALYTALYTSIETWTLYNGLIA YLLIGSLLGGEWLYRTFWLKKS
Specific function: Unknown
COG id: COG4648
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20438; Mature: 20438
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFLQIVTTIVVIAYPLAVYFGLHYLPAGSIALALCAILVIRLLLQQQKVKALMLPILV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGLTAGSFIAKENNWLLFYPVVINLTMLGLFGYSLKRGPSMIERLARLKEPDLPDEAIG HHCCCCCHHEEECCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHH YLNRVTLIWCGLFIFNGAMALYTALYTSIETWTLYNGLIAYLLIGSLLGGEWLYRTFWLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC KS CC >Mature Secondary Structure MRLFLQIVTTIVVIAYPLAVYFGLHYLPAGSIALALCAILVIRLLLQQQKVKALMLPILV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGLTAGSFIAKENNWLLFYPVVINLTMLGLFGYSLKRGPSMIERLARLKEPDLPDEAIG HHCCCCCHHEEECCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHH YLNRVTLIWCGLFIFNGAMALYTALYTSIETWTLYNGLIAYLLIGSLLGGEWLYRTFWLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC KS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA