| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is murC [H]
Identifier: 157963621
GI number: 157963621
Start: 4632424
End: 4633893
Strand: Reverse
Name: murC [H]
Synonym: Spea_3810
Alternate gene names: 157963621
Gene position: 4633893-4632424 (Counterclockwise)
Preceding gene: 157963622
Following gene: 157963620
Centisome position: 89.55
GC content: 48.78
Gene sequence:
>1470_bases ATGAGTAACAAAGCAGAGAAGTATTCGCAGCTAAGAACCATGATCCCTGAGATGCGCAGGGTTAAGCACATCTATTTCGT TGGAATAGGTGGTGCTGGTATGGGCGGCATAGCGGAAGTGCTTGTTAATGAGGGTTACAAATTAAGTGGCTCAGATATCG CGCAAAGTGCGGTCACTGAGCGATTAGCTCAACTTGGCGTGACTATCTATATTGGCCACGATGCAAGTCAGGTAAAAGAT GTCGATGTGGTTGTGGTGTCTACGGCGATTAGCGCCGATAACCCAGAGCTAGTTGCAGCAAAAGAGCTTAGGATCCCTGT AGTACGCCGCGCCGAGATGCTGGCTGAGCTGATGCGTTATCGTCACGGTGTTGCCGTTGCGGGAACTCACGGTAAAACCA CTACGACAAGTTTAATTGCCAGCGTTTATGGTCAGGCTGAGCGTGACCCAACATTTGTGATTGGCGGCTTGTTAAATAGT GCGGGTACTAACGCAAGACTAGGTCATAGCCGTTATCTTATTGCCGAGGCGGATGAGAGCGATGCGAGCTTCTTGCATCT GCAGCCGATGGTGAGTGTGGTGACCAATATTGAAGCTGACCATATGGATACCTATGAAGGCGATCTAGAGAAGCTTAAGA CGACCTTCGTCGATTTCCTGCATAACTTGCCATTCTATGGCGTCGCAGTTGTGTGTATCGACGATCCTATCGTACGTGAG CTTATTCCGCGTATCGGTCGTCGTATAGTGACTTACGGTTTCAGTGAAGATGCAGATGTTCGTGCATTAGATTTCAAGCA AACAGGTTATAGCTGTGAGTTTACCGTACGCCGCGCTGGTATGGATGATCTGCAGCTGTCAGTTAATTTACCCGGTGAAC ATAACGTACTTAACTCATTGGCTGCGATTGCTGTAGCAACTGAAGATGAGATTGAAGACGAGGCGATTATTACCGCCTTA GCCGACTTCCAGGGTATTGGTCGCCGCTTTCAACAGATTGGTGAATTCACAACGGCCAAAGGTGAGATTAAGTTGGTCGA TGACTATGGTCATCACCCAAGCGAAGTCGCGGCAACGATTAAGGCTGCCAGATTAGGCTGGCCTGAGCGTCGCTTAGTCA TGATCTATCAGCCACACCGCTATAGTCGAACCCGTGACCTATATGAAGACTTTGTGGAAGTCTTATCGCAAGTGGACTGC TTGTTGATGCTTGATGTTTATGCCGCAGGTGAAGCGCCAATCCCTGGTGCCGATAGTCGAGCATTATGTCGTTCGATTAG AGTGCGTGGCCAAGTCGAGCCTGTGTTCGTGGCGAGTACCGAACAACTAGAAACTGTATTGCCAGAGATCTTACAAGATG GCGACCTACTGTTGACCCAAGGGGCTGGCAGTATTGGCTTGTTGTCTCGCAGTCTAGCCGAGTCAAACCTTGGTTTTGAT TCTGCGGTTACAGATGAAAAAAATGCGTAA
Upstream 100 bases:
>100_bases GAATTATGCAATATGGGCCAGCGTGCTCGAGACGTAGCCATTTTAGATGCGACAGAGCGAGTAGCTAATGTCTGTATTCG ATTAGCTGAGAAGGGTTGAG
Downstream 100 bases:
>100_bases TTTAGAGCGATATAGCTTAAGTTACACATCAAATTTTGACGCTTGGAATAAGGGCTATATAATGGCCGATTTTCCGGGGT TATGGTTGCAAAAGGAAGCC
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MSNKAEKYSQLRTMIPEMRRVKHIYFVGIGGAGMGGIAEVLVNEGYKLSGSDIAQSAVTERLAQLGVTIYIGHDASQVKD VDVVVVSTAISADNPELVAAKELRIPVVRRAEMLAELMRYRHGVAVAGTHGKTTTTSLIASVYGQAERDPTFVIGGLLNS AGTNARLGHSRYLIAEADESDASFLHLQPMVSVVTNIEADHMDTYEGDLEKLKTTFVDFLHNLPFYGVAVVCIDDPIVRE LIPRIGRRIVTYGFSEDADVRALDFKQTGYSCEFTVRRAGMDDLQLSVNLPGEHNVLNSLAAIAVATEDEIEDEAIITAL ADFQGIGRRFQQIGEFTTAKGEIKLVDDYGHHPSEVAATIKAARLGWPERRLVMIYQPHRYSRTRDLYEDFVEVLSQVDC LLMLDVYAAGEAPIPGADSRALCRSIRVRGQVEPVFVASTEQLETVLPEILQDGDLLLTQGAGSIGLLSRSLAESNLGFD SAVTDEKNA
Sequences:
>Translated_489_residues MSNKAEKYSQLRTMIPEMRRVKHIYFVGIGGAGMGGIAEVLVNEGYKLSGSDIAQSAVTERLAQLGVTIYIGHDASQVKD VDVVVVSTAISADNPELVAAKELRIPVVRRAEMLAELMRYRHGVAVAGTHGKTTTTSLIASVYGQAERDPTFVIGGLLNS AGTNARLGHSRYLIAEADESDASFLHLQPMVSVVTNIEADHMDTYEGDLEKLKTTFVDFLHNLPFYGVAVVCIDDPIVRE LIPRIGRRIVTYGFSEDADVRALDFKQTGYSCEFTVRRAGMDDLQLSVNLPGEHNVLNSLAAIAVATEDEIEDEAIITAL ADFQGIGRRFQQIGEFTTAKGEIKLVDDYGHHPSEVAATIKAARLGWPERRLVMIYQPHRYSRTRDLYEDFVEVLSQVDC LLMLDVYAAGEAPIPGADSRALCRSIRVRGQVEPVFVASTEQLETVLPEILQDGDLLLTQGAGSIGLLSRSLAESNLGFD SAVTDEKNA >Mature_488_residues SNKAEKYSQLRTMIPEMRRVKHIYFVGIGGAGMGGIAEVLVNEGYKLSGSDIAQSAVTERLAQLGVTIYIGHDASQVKDV DVVVVSTAISADNPELVAAKELRIPVVRRAEMLAELMRYRHGVAVAGTHGKTTTTSLIASVYGQAERDPTFVIGGLLNSA GTNARLGHSRYLIAEADESDASFLHLQPMVSVVTNIEADHMDTYEGDLEKLKTTFVDFLHNLPFYGVAVVCIDDPIVREL IPRIGRRIVTYGFSEDADVRALDFKQTGYSCEFTVRRAGMDDLQLSVNLPGEHNVLNSLAAIAVATEDEIEDEAIITALA DFQGIGRRFQQIGEFTTAKGEIKLVDDYGHHPSEVAATIKAARLGWPERRLVMIYQPHRYSRTRDLYEDFVEVLSQVDCL LMLDVYAAGEAPIPGADSRALCRSIRVRGQVEPVFVASTEQLETVLPEILQDGDLLLTQGAGSIGLLSRSLAESNLGFDS AVTDEKNA
Specific function: Cell wall formation [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786279, Length=479, Percent_Identity=63.8830897703549, Blast_Score=597, Evalue=1e-172, Organism=Escherichia coli, GI1790680, Length=463, Percent_Identity=27.8617710583153, Blast_Score=144, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 53402; Mature: 53271
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKAEKYSQLRTMIPEMRRVKHIYFVGIGGAGMGGIAEVLVNEGYKLSGSDIAQSAVTE CCCHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHCCCCEECCHHHHHHHHHH RLAQLGVTIYIGHDASQVKDVDVVVVSTAISADNPELVAAKELRIPVVRRAEMLAELMRY HHHHCCEEEEECCCHHHCCCCEEEEEEEEECCCCCCEEEHHHCCCHHHHHHHHHHHHHHH RHGVAVAGTHGKTTTTSLIASVYGQAERDPTFVIGGLLNSAGTNARLGHSRYLIAEADES HCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHCCCCCCCCCCCCEEEEEECCCC DASFLHLQPMVSVVTNIEADHMDTYEGDLEKLKTTFVDFLHNLPFYGVAVVCIDDPIVRE CCCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEEEECCHHHHH LIPRIGRRIVTYGFSEDADVRALDFKQTGYSCEFTVRRAGMDDLQLSVNLPGEHNVLNSL HHHHHCCEEEEECCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHH AAIAVATEDEIEDEAIITALADFQGIGRRFQQIGEFTTAKGEIKLVDDYGHHPSEVAATI HHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH KAARLGWPERRLVMIYQPHRYSRTRDLYEDFVEVLSQVDCLLMLDVYAAGEAPIPGADSR HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHEEEEHHHCCCCCCCCCCHH ALCRSIRVRGQVEPVFVASTEQLETVLPEILQDGDLLLTQGAGSIGLLSRSLAESNLGFD HHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCC SAVTDEKNA CCCCCCCCC >Mature Secondary Structure SNKAEKYSQLRTMIPEMRRVKHIYFVGIGGAGMGGIAEVLVNEGYKLSGSDIAQSAVTE CCHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHCCCCEECCHHHHHHHHHH RLAQLGVTIYIGHDASQVKDVDVVVVSTAISADNPELVAAKELRIPVVRRAEMLAELMRY HHHHCCEEEEECCCHHHCCCCEEEEEEEEECCCCCCEEEHHHCCCHHHHHHHHHHHHHHH RHGVAVAGTHGKTTTTSLIASVYGQAERDPTFVIGGLLNSAGTNARLGHSRYLIAEADES HCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHCCCCCCCCCCCCEEEEEECCCC DASFLHLQPMVSVVTNIEADHMDTYEGDLEKLKTTFVDFLHNLPFYGVAVVCIDDPIVRE CCCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEEEECCHHHHH LIPRIGRRIVTYGFSEDADVRALDFKQTGYSCEFTVRRAGMDDLQLSVNLPGEHNVLNSL HHHHHCCEEEEECCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHH AAIAVATEDEIEDEAIITALADFQGIGRRFQQIGEFTTAKGEIKLVDDYGHHPSEVAATI HHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH KAARLGWPERRLVMIYQPHRYSRTRDLYEDFVEVLSQVDCLLMLDVYAAGEAPIPGADSR HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHEEEEHHHCCCCCCCCCCHH ALCRSIRVRGQVEPVFVASTEQLETVLPEILQDGDLLLTQGAGSIGLLSRSLAESNLGFD HHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCC SAVTDEKNA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA