| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is mreC [H]
Identifier: 157963565
GI number: 157963565
Start: 4565332
End: 4566219
Strand: Reverse
Name: mreC [H]
Synonym: Spea_3753
Alternate gene names: 157963565
Gene position: 4566219-4565332 (Counterclockwise)
Preceding gene: 157963566
Following gene: 157963564
Centisome position: 88.24
GC content: 48.2
Gene sequence:
>888_bases ATGAAGCCTATTTTTGCTCGCGGTATTTCCAACCAATTTCGATTAACACTGGCTGTTATCATGTCAGTGATTCTGCTTGT CGCTAACGACAGGCTAGAGCCTGTGCGTAATTCCCTCTCATCATTATTAAGCCCTTTGCAATATGTGGCTAATATTCCCG GTGCCTTACTCGATCTTTCTGCTGAAAGTCTCGCAACGCGCAATATGTTGGCTAAGCAGAATAAAGAGTTATTACGTCAT CAACTCTTGATGAGTGAACGCTTACAACGCTTTGAACACCTTCGCCAAGAAAACGATCGTTTGCGTGGATTACTCGGCTC GCCAGTGCATATGGATGCCAAGAAAGTTGTTGCCGAAGTCATGGAAGTGGCAAGCGACCCGTTTCGTCAATATGTGGTAC TGAACCACGGTTCACGTAACGGCGTATTTGTTGGCCAACCTGTGGTCGATGCTCAAGGTGTCGTTGGACAGGTTGTGCAG GTGAGTGAGCTCACCAGTCGAGTGTTATTACTTTCCGATACCACCCACGGTATTCCGGTGCGAATTACCCGAAACGATGT ACGCTTAATGGCGTTTGGAACTGGTGTGCTCGATGAGTTAGAGCTAAGACATGTGGCCAAGAGTACCGATGTTCGTGTCG GCGATCTGCTGGTGTCTTCCGGTCTTGGCAAGCGTTTTCCTGAAGGCTACCCCGTGGCTCGAGTCATGAGTGTCGAAAAA GATGATGGTAAGAATTACGCTACCGTTATCGCCCAACCGTTAGCGGCCTTAGACAGAATTCGTTATCTGTTACTACTCTG GCCGGATATTGAGTCTGACGGAAAAGATCTTACTCCGCCTGAGGAGATAGAAGAGGTCTTGAAGGCGAGTCAGGAGAGCA CTCAATGA
Upstream 100 bases:
>100_bases GTAGAGCTTTAGAGATGATCGATATGCATGGCGGCGACCTGTTCTCTGAAGAAAACTAACCACGGTTAAAAAGGGCGGTA ATACACCGCCCTAGTTTGTT
Downstream 100 bases:
>100_bases GTTTACATGTAGCAAATGGCCGCTGGGTCGTTTGGTTAAGCCTATTAGTGGCTATGCTGTTTCAAATTATGCCATTGCCA GATGTGGTAGAGGCGTGGCG
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKPIFARGISNQFRLTLAVIMSVILLVANDRLEPVRNSLSSLLSPLQYVANIPGALLDLSAESLATRNMLAKQNKELLRH QLLMSERLQRFEHLRQENDRLRGLLGSPVHMDAKKVVAEVMEVASDPFRQYVVLNHGSRNGVFVGQPVVDAQGVVGQVVQ VSELTSRVLLLSDTTHGIPVRITRNDVRLMAFGTGVLDELELRHVAKSTDVRVGDLLVSSGLGKRFPEGYPVARVMSVEK DDGKNYATVIAQPLAALDRIRYLLLLWPDIESDGKDLTPPEEIEEVLKASQESTQ
Sequences:
>Translated_295_residues MKPIFARGISNQFRLTLAVIMSVILLVANDRLEPVRNSLSSLLSPLQYVANIPGALLDLSAESLATRNMLAKQNKELLRH QLLMSERLQRFEHLRQENDRLRGLLGSPVHMDAKKVVAEVMEVASDPFRQYVVLNHGSRNGVFVGQPVVDAQGVVGQVVQ VSELTSRVLLLSDTTHGIPVRITRNDVRLMAFGTGVLDELELRHVAKSTDVRVGDLLVSSGLGKRFPEGYPVARVMSVEK DDGKNYATVIAQPLAALDRIRYLLLLWPDIESDGKDLTPPEEIEEVLKASQESTQ >Mature_295_residues MKPIFARGISNQFRLTLAVIMSVILLVANDRLEPVRNSLSSLLSPLQYVANIPGALLDLSAESLATRNMLAKQNKELLRH QLLMSERLQRFEHLRQENDRLRGLLGSPVHMDAKKVVAEVMEVASDPFRQYVVLNHGSRNGVFVGQPVVDAQGVVGQVVQ VSELTSRVLLLSDTTHGIPVRITRNDVRLMAFGTGVLDELELRHVAKSTDVRVGDLLVSSGLGKRFPEGYPVARVMSVEK DDGKNYATVIAQPLAALDRIRYLLLLWPDIESDGKDLTPPEEIEEVLKASQESTQ
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
Organism=Escherichia coli, GI1789648, Length=289, Percent_Identity=47.0588235294118, Blast_Score=229, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 32701; Mature: 32701
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIFARGISNQFRLTLAVIMSVILLVANDRLEPVRNSLSSLLSPLQYVANIPGALLDLS CCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC AESLATRNMLAKQNKELLRHQLLMSERLQRFEHLRQENDRLRGLLGSPVHMDAKKVVAEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH MEVASDPFRQYVVLNHGSRNGVFVGQPVVDAQGVVGQVVQVSELTSRVLLLSDTTHGIPV HHHHCCHHHEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCEE RITRNDVRLMAFGTGVLDELELRHVAKSTDVRVGDLLVSSGLGKRFPEGYPVARVMSVEK EEECCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHEEECC DDGKNYATVIAQPLAALDRIRYLLLLWPDIESDGKDLTPPEEIEEVLKASQESTQ CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKPIFARGISNQFRLTLAVIMSVILLVANDRLEPVRNSLSSLLSPLQYVANIPGALLDLS CCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC AESLATRNMLAKQNKELLRHQLLMSERLQRFEHLRQENDRLRGLLGSPVHMDAKKVVAEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH MEVASDPFRQYVVLNHGSRNGVFVGQPVVDAQGVVGQVVQVSELTSRVLLLSDTTHGIPV HHHHCCHHHEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCEE RITRNDVRLMAFGTGVLDELELRHVAKSTDVRVGDLLVSSGLGKRFPEGYPVARVMSVEK EEECCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHEEECC DDGKNYATVIAQPLAALDRIRYLLLLWPDIESDGKDLTPPEEIEEVLKASQESTQ CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]