Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is yjgA [C]

Identifier: 157963553

GI number: 157963553

Start: 4547231

End: 4547773

Strand: Direct

Name: yjgA [C]

Synonym: Spea_3741

Alternate gene names: 157963553

Gene position: 4547231-4547773 (Clockwise)

Preceding gene: 157963551

Following gene: 157963554

Centisome position: 87.88

GC content: 39.59

Gene sequence:

>543_bases
ATGAAGATTGTCGGTGACTCAGAACACTTCCACCAGCCCTATGATAAAGATGAGAACTACGAAAGTAGAGCGGACGCTAA
ACGCGAAATCGCCATCTATCAAGAATATGGCAATAGATTAGTTGCACTTAGTAAGACCCAGGTACAGAAGCTAAATCTTG
ATGAAACGCTTTATGATAATGTTTTGAAAGCTAAAACTATCAAAATTAATACCGAAGCGCACCGTCGTCACATTCAGTAC
ATTGGTAAACTAATGCGTTATGTCGATCTCGAAGAGTTAGAGGTCGCGATTAAGAACGTGCTGAACCAAAACAGCAACGA
AAGTGCTAGAACCAATGTGGCTGACAAGACACGTGATCAGCTGTTAGCTGAAGGTGATTCTGCAGTACAGGCCTTAATTG
AGCAGCACCCTGAATTTGATAGACAGAAACTTCGTCAGTATATTCGTCAGACAAAAAAAGAGCTAACGAAAAACCCTGAT
ATTGAAGCATCAAAGACAGCTAAAGAATTAAGTAAATATTTACGTAACGAGATCAAAGATTAA

Upstream 100 bases:

>100_bases
ACAAATCACCGCTTTAGCCAGCGCAACAACTAAAATAGGAAAGGAAATAAGCAAGTATAGATGTTATTATTAGCTCAGAA
TTTGTAAGAGATTTTTAGAT

Downstream 100 bases:

>100_bases
CCGTTACATATATAGACATCACTTCTATATAACTACACAATAGCTCCCTAAGTCTTAACACGACTTTGGGAGCTTTTTTA
TTGGTCTGTCTTCGGCTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKIVGDSEHFHQPYDKDENYESRADAKREIAIYQEYGNRLVALSKTQVQKLNLDETLYDNVLKAKTIKINTEAHRRHIQY
IGKLMRYVDLEELEVAIKNVLNQNSNESARTNVADKTRDQLLAEGDSAVQALIEQHPEFDRQKLRQYIRQTKKELTKNPD
IEASKTAKELSKYLRNEIKD

Sequences:

>Translated_180_residues
MKIVGDSEHFHQPYDKDENYESRADAKREIAIYQEYGNRLVALSKTQVQKLNLDETLYDNVLKAKTIKINTEAHRRHIQY
IGKLMRYVDLEELEVAIKNVLNQNSNESARTNVADKTRDQLLAEGDSAVQALIEQHPEFDRQKLRQYIRQTKKELTKNPD
IEASKTAKELSKYLRNEIKD
>Mature_180_residues
MKIVGDSEHFHQPYDKDENYESRADAKREIAIYQEYGNRLVALSKTQVQKLNLDETLYDNVLKAKTIKINTEAHRRHIQY
IGKLMRYVDLEELEVAIKNVLNQNSNESARTNVADKTRDQLLAEGDSAVQALIEQHPEFDRQKLRQYIRQTKKELTKNPD
IEASKTAKELSKYLRNEIKD

Specific function: Unknown

COG id: COG3028

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0307 family [H]

Homologues:

Organism=Escherichia coli, GI1790681, Length=156, Percent_Identity=31.4102564102564, Blast_Score=78, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023153
- InterPro:   IPR006839 [H]

Pfam domain/function: PF04751 DUF615 [H]

EC number: NA

Molecular weight: Translated: 21061; Mature: 21061

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVGDSEHFHQPYDKDENYESRADAKREIAIYQEYGNRLVALSKTQVQKLNLDETLYDN
CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCCCHHHHHHH
VLKAKTIKINTEAHRRHIQYIGKLMRYVDLEELEVAIKNVLNQNSNESARTNVADKTRDQ
HHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LLAEGDSAVQALIEQHPEFDRQKLRQYIRQTKKELTKNPDIEASKTAKELSKYLRNEIKD
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIVGDSEHFHQPYDKDENYESRADAKREIAIYQEYGNRLVALSKTQVQKLNLDETLYDN
CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCCCHHHHHHH
VLKAKTIKINTEAHRRHIQYIGKLMRYVDLEELEVAIKNVLNQNSNESARTNVADKTRDQ
HHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LLAEGDSAVQALIEQHPEFDRQKLRQYIRQTKKELTKNPDIEASKTAKELSKYLRNEIKD
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA