| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963547
Identifier: 157963547
GI number: 157963547
Start: 4539764
End: 4540978
Strand: Reverse
Name: 157963547
Synonym: Spea_3735
Alternate gene names: NA
Gene position: 4540978-4539764 (Counterclockwise)
Preceding gene: 157963548
Following gene: 157963546
Centisome position: 87.76
GC content: 47.33
Gene sequence:
>1215_bases GTGTTAGCAAAACTTCGTTCTTTGCCTGATAGCGTTAAGCAATACTTAATTGTTACTGGGAACTACTGGGCATTTACGCT TACCGATGGTGCGCTGCGTATGCTGGTGGTACTGCACTTTTATGACTTAGGTTATACACCGCTGGCGATTGCCATGTTAT TCCTGTTTTATGAGATCTTTGGTGTCGTCACTAATCTTATCGGCGGCTGGCTCGGTGCAAGGCTAGGGCTAAATCGCACC ATGAATATTGGACTAGGTTTGCAGATAGTGGCTCTTGCGATGCTTTTGCTACCTGCAGCCATGCTGACTGTTCCTTGGGT GATGGCGGCACAGGCGTTGTCGGGGATCGCTAAAGATCTCAATAAGATGAGTGCCAAGAGTGCAATTAAAACCTTAGTGC CGAAAGATGCCGAAGATAAACTTTTTCGCTGGGTAGCCATATTAACGGGCTCTAAGAATGCGTTAAAAGGTGCTGGATTC TTCTTAGGTGGCCTGTTGCTGTCTGTTGCAGGCTTTACTGGCGCAGTGGCAATAATGGCTGCAATGTTACTGATTGTTTG GCTTGGCAGTCTTGTGAGTTTGAAAGCTGACTTAGGTAAAGCTAAGTCTAAACCCAAGTTTACTGAGATCTTTTCTAAGA GTGATAGCGTTAACATCCTCTCTGCGGCGCGTTTATTTTTGTTTGCCGCCCGAGATGTCTGGTTTGTGATTGCACTGCCT GTGTTTCTTGCCAGCCAACTTGGCTGGGAACATAGCAGTGTCGGTGCTTTTCTTGCTATTTGGGTTATCGCCTATGGCAT GGTGCAGTCCATAGCCCCCTCTTTTACCGCAAGAAAGCGTGCGCCAGATGGCAAGGTTGCTACGCTGTGGGTCGGCCTAC TGACACTGGTCACCGCAATATTGGCTGTGGTGATGTTTACTGGCTGGCTGGCACCACAATTGGCCCTGATTGTGGGCTTG ATGATTTTCGGTGCCATCTTTGCGATTAACTCTTCACTGCATAGCTATTTGATTGTTAGCTATGCCGGAGAAGATGGCGT TTCCCTCGATATTGGCTTCTATTACATGGCGAATGCAATGGGACGCTTACTCGGTACAGTGCTTTCCGGCTGGGTATATC AAGAGGCTGGTCTGTCGGCTTGCTTGTTTATTTCGGCTGCTATGCTGTTTGTTACCTTTATTATCTCCTTTAAATTGCCT CGAACTCAAAGTTGA
Upstream 100 bases:
>100_bases GTCAGCTGTTCTAGCCTTTTCTTTTTCCTAGCAGCGTAGCGTCCTAGTAGTGGCGCAGCCACGTCCTCGCATCCTAGGTC CTTTTTTAAGGTGGTAAGCA
Downstream 100 bases:
>100_bases TCGCTTCTATCTAGCCATGGTGTCTTCTGCTTGGGTATATCAAGAGGCGGGGTTGTCGGTTTGCTTGTTTATTTCGGCAG CCATGTTGTTTGTGACTTTT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; MFS Transporter; Transporter-Like Protein; Permease Of Facilitator Superfamily; Nitric Oxide Reductase Cytochrome B Subunit
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MLAKLRSLPDSVKQYLIVTGNYWAFTLTDGALRMLVVLHFYDLGYTPLAIAMLFLFYEIFGVVTNLIGGWLGARLGLNRT MNIGLGLQIVALAMLLLPAAMLTVPWVMAAQALSGIAKDLNKMSAKSAIKTLVPKDAEDKLFRWVAILTGSKNALKGAGF FLGGLLLSVAGFTGAVAIMAAMLLIVWLGSLVSLKADLGKAKSKPKFTEIFSKSDSVNILSAARLFLFAARDVWFVIALP VFLASQLGWEHSSVGAFLAIWVIAYGMVQSIAPSFTARKRAPDGKVATLWVGLLTLVTAILAVVMFTGWLAPQLALIVGL MIFGAIFAINSSLHSYLIVSYAGEDGVSLDIGFYYMANAMGRLLGTVLSGWVYQEAGLSACLFISAAMLFVTFIISFKLP RTQS
Sequences:
>Translated_404_residues MLAKLRSLPDSVKQYLIVTGNYWAFTLTDGALRMLVVLHFYDLGYTPLAIAMLFLFYEIFGVVTNLIGGWLGARLGLNRT MNIGLGLQIVALAMLLLPAAMLTVPWVMAAQALSGIAKDLNKMSAKSAIKTLVPKDAEDKLFRWVAILTGSKNALKGAGF FLGGLLLSVAGFTGAVAIMAAMLLIVWLGSLVSLKADLGKAKSKPKFTEIFSKSDSVNILSAARLFLFAARDVWFVIALP VFLASQLGWEHSSVGAFLAIWVIAYGMVQSIAPSFTARKRAPDGKVATLWVGLLTLVTAILAVVMFTGWLAPQLALIVGL MIFGAIFAINSSLHSYLIVSYAGEDGVSLDIGFYYMANAMGRLLGTVLSGWVYQEAGLSACLFISAAMLFVTFIISFKLP RTQS >Mature_404_residues MLAKLRSLPDSVKQYLIVTGNYWAFTLTDGALRMLVVLHFYDLGYTPLAIAMLFLFYEIFGVVTNLIGGWLGARLGLNRT MNIGLGLQIVALAMLLLPAAMLTVPWVMAAQALSGIAKDLNKMSAKSAIKTLVPKDAEDKLFRWVAILTGSKNALKGAGF FLGGLLLSVAGFTGAVAIMAAMLLIVWLGSLVSLKADLGKAKSKPKFTEIFSKSDSVNILSAARLFLFAARDVWFVIALP VFLASQLGWEHSSVGAFLAIWVIAYGMVQSIAPSFTARKRAPDGKVATLWVGLLTLVTAILAVVMFTGWLAPQLALIVGL MIFGAIFAINSSLHSYLIVSYAGEDGVSLDIGFYYMANAMGRLLGTVLSGWVYQEAGLSACLFISAAMLFVTFIISFKLP RTQS
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43477; Mature: 43477
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKLRSLPDSVKQYLIVTGNYWAFTLTDGALRMLVVLHFYDLGYTPLAIAMLFLFYEIF CCCHHHCCHHHHHCEEEEECCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GVVTNLIGGWLGARLGLNRTMNIGLGLQIVALAMLLLPAAMLTVPWVMAAQALSGIAKDL HHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKMSAKSAIKTLVPKDAEDKLFRWVAILTGSKNALKGAGFFLGGLLLSVAGFTGAVAIMA HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLLIVWLGSLVSLKADLGKAKSKPKFTEIFSKSDSVNILSAARLFLFAARDVWFVIALP HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VFLASQLGWEHSSVGAFLAIWVIAYGMVQSIAPSFTARKRAPDGKVATLWVGLLTLVTAI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHH LAVVMFTGWLAPQLALIVGLMIFGAIFAINSSLHSYLIVSYAGEDGVSLDIGFYYMANAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEHHHHHHHHHH GRLLGTVLSGWVYQEAGLSACLFISAAMLFVTFIISFKLPRTQS HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLAKLRSLPDSVKQYLIVTGNYWAFTLTDGALRMLVVLHFYDLGYTPLAIAMLFLFYEIF CCCHHHCCHHHHHCEEEEECCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GVVTNLIGGWLGARLGLNRTMNIGLGLQIVALAMLLLPAAMLTVPWVMAAQALSGIAKDL HHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKMSAKSAIKTLVPKDAEDKLFRWVAILTGSKNALKGAGFFLGGLLLSVAGFTGAVAIMA HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLLIVWLGSLVSLKADLGKAKSKPKFTEIFSKSDSVNILSAARLFLFAARDVWFVIALP HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VFLASQLGWEHSSVGAFLAIWVIAYGMVQSIAPSFTARKRAPDGKVATLWVGLLTLVTAI HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHH LAVVMFTGWLAPQLALIVGLMIFGAIFAINSSLHSYLIVSYAGEDGVSLDIGFYYMANAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEHHHHHHHHHH GRLLGTVLSGWVYQEAGLSACLFISAAMLFVTFIISFKLPRTQS HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA