| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157963496
Identifier: 157963496
GI number: 157963496
Start: 4484231
End: 4484401
Strand: Reverse
Name: 157963496
Synonym: Spea_3684
Alternate gene names: NA
Gene position: 4484401-4484231 (Counterclockwise)
Preceding gene: 157963501
Following gene: 157963494
Centisome position: 86.66
GC content: 43.86
Gene sequence:
>171_bases ATGCCCCGCGCAAGAAGTACGCTAATAAGCTTGGAAGATACGCCTTACTATCACTGCTGTAGTCGTGTAGTTCGTCGTGC CAAAGCCAATCATAGACACCCATCGTTAAGATTAACATTGGGTGCCTTTGTTTTTTCTTCTTGTAAAAGCACACTGTCTG AAGGCTTATAG
Upstream 100 bases:
>100_bases ACAATAGCTAATCATAGACACCCAGCCTTAATGGCATGTTTTGCTGCCTCTTACTAAGCTTTAACTGTTGGTTTAGTTAT TGCTGAAGTAGGAGGTTGTT
Downstream 100 bases:
>100_bases TTGGCTTCATTTAAACGCTTATCAGAGTATTGCATCTAGCTTTCGCCAGTTACTTATTAGCGAATAATCAAGAACCACAA CGTGGTATTGGTTGACACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MPRARSTLISLEDTPYYHCCSRVVRRAKANHRHPSLRLTLGAFVFSSCKSTLSEGL
Sequences:
>Translated_56_residues MPRARSTLISLEDTPYYHCCSRVVRRAKANHRHPSLRLTLGAFVFSSCKSTLSEGL >Mature_55_residues PRARSTLISLEDTPYYHCCSRVVRRAKANHRHPSLRLTLGAFVFSSCKSTLSEGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6321; Mature: 6190
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRARSTLISLEDTPYYHCCSRVVRRAKANHRHPSLRLTLGAFVFSSCKSTLSEGL CCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PRARSTLISLEDTPYYHCCSRVVRRAKANHRHPSLRLTLGAFVFSSCKSTLSEGL CCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA