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The map label for this gene is chiD [H]

Identifier: 157963467

GI number: 157963467

Start: 4446808

End: 4448991

Strand: Reverse

Name: chiD [H]

Synonym: Spea_3655

Alternate gene names: 157963467

Gene position: 4448991-4446808 (Counterclockwise)

Preceding gene: 157963468

Following gene: 157963466

Centisome position: 85.98

GC content: 49.22

Gene sequence:

>2184_bases
ATGAAATCACTAAAACTGAATCTACTAGGTGCCAGCATTGCGCTTGCTATGGGGGCTATTTCTTCCCCAGCTATGGCCAA
TGGTACCGATATGGTAAATCCGCAAGCCGGTGTGGTTGTGGGTTATTGGCATAACTGGTGCGACGGCTCTGGCTATAAGG
GGGGCATTGCACCTTGTGTAACCTTAACCGATGTTGATCCGCAGTATAACGTGGTCGATGTGTCATTTATGAAGGTTTAT
GGCGCCGTAGGCACGATTCCTACATTTAAATTAGACCCTGCAATAGGCCTATCAGAGGCCCAATTTATTGAGCAGATTAG
CGAGCTTAACCGTCAAGGACGTTCGGTATTAATCGCATTGGGTGGCGCCGATGCGCACATCGAACTGCGTAATGGTCAAG
AGCAGGCTCTCGCCGATGAAATTATTCGTCTAGTCGAGGTTTATGGCTTTGACGGCCTAGATATCGATCTTGAGCAGGCT
GCTGTGACCGCTGCCGATAACCAAACTGTTATTCCTGCGGCGCTACGCATAGTTAAAGATTACTACCGTGATCAGGGGAA
GAACTTCCTAATCACCATGGCGCCAGAGTTTCCGTATCTGACAACAGGTGGTAAGTATGTGCCTTATATCACCGAGCTAG
AAGGTTATTACGACTGGATCAACCCACAGTTCTATAACCAAGGTGGCGATGGTATTTATATCGAAGGCCTAGGCTGGATT
GCACAGAACAACGATAACCTTAAGCAAGAGTTTATCTACCATATCGCCGATGCCTTAGCGAACGGCACTAACGGCTTTAC
TAAGATCCCCCACGATAAGTTAGTCTTTGGTATTCCAACCAACATCGACGCGGCCGCGACAGGTTACATCAAACAACCGC
AAAAACTCTATGCGGCATTTGAGCAGCTAAAAGCCCAAGGCCAGCCACTGCGCGGTGTAATGACGTGGTCGGTTAACTGG
GACATGGGGAAAAACTCTGCGGGTCAGGCTTATAACGAGTCATTCATCAAGGCCTACGGTCCATTCATCCATGGCCAAGA
TATTCTGCCTCCAGAGCCGGATAACGGTAAGCCGATTTTTGCAGGTGTCAGCAATGCTCGCGTTAAACTCGGTGCTCAGT
TTGATGCGCTAGCAGGTGTAACGGCTCGAGATATGGAAGATGGCGATTTAACCTCTGATATCCAAGTCGAAGGCGCGATT
GATACTCAGACACTAGGTTTGTATGCACTAACTTATCGTGTTAGCGATAGTGACGATAACCTAACAGAGCAAGTGCGCAC
GGTTGAAGTCTATAACACTAAGCCTGAAATTAAAGGCGTAGCCAATGCTAGCATTTTACTGGGCAGTGCTTTCGATGCGA
TGGCAGGTGTAAGTGCAATCGATGCTGAAGATGGCGACTTAACGGCGCAAATTAGCGTCGATGGTGATGTCGATACCGAC
ACTCTTGGTCAGTACTCACTAACTTACCGCGTTAGCGACAGCGCAGGCCAGCAGGTTGAAGTGTTGCGTACTATTACCGT
GAAAGAGCAAGGCGCGGTATGTGATAACGCATGGGACAATGCAACAGTTTACCTTGGCGGTGAAACAGTTAGTCATGCAG
GTAAGAGCTGGTTAGCCGGCTGGTGGACTCAAGGTGACGAGCCTGGCACAACGGGTGAGTGGGGCGTTTGGAAAGCACAA
GGTGATAGCGATTGTGATGGTGGTTTACCACCGGTTGTTAAACCAAGCCTTGAAGTGACTGGTATTGCACCACGTTACGT
GCTTGAGCAAGGCAGCGTGAACATCGAGTTTAGCGCAAGCGTTAATCAAACCATGGTGATCAATGCCAGCTTAGTGCAAG
GCAATACAGTGTTTGCTAGCAGTGAAATGAGCGTTAGCAACAGTGCGTCATTCACATTGCTGGCGACCGATTTAACTGCG
GGGAGTTATGACATCGTAGTGAACGTCGAAGAGCAACAACTAAGTAGCCGAACTAGCATCAATCTAGTAGAAGAAGATAG
TGAAGGCGGTGACTATCCTGCTTACGCTGCGGGTACCCAGTATCAAGCGGGTGATGTGGTGACTAATGCTGGCGGCGTAT
TTGAATGTCTGCCTTGGCCAAACAGTGGCTGGTGTAGCGGCTCAGCAAGCCATTACGCGCCAGGCACCGGCAGTGCTTGG
CAAGATGCCTGGTTTGCTCATTAA

Upstream 100 bases:

>100_bases
CTAAGGGGACACCTATGGCAGTGGCGCTACCGCAAGTGACACAGGCCCTACTGCATGCCTGTTTGTTGCTTTTCGATATC
TAATGAAAAGGGATAAATAA

Downstream 100 bases:

>100_bases
TCAGCTTGCACGTTAATCCGTCTACATGCTAACAATCGAATAACTCATTAAGCAATGCAATATTGGTGACTGCTTACGCA
GTTAGCCGATTCTAGCTAGT

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 727; Mature: 727

Protein sequence:

>727_residues
MKSLKLNLLGASIALAMGAISSPAMANGTDMVNPQAGVVVGYWHNWCDGSGYKGGIAPCVTLTDVDPQYNVVDVSFMKVY
GAVGTIPTFKLDPAIGLSEAQFIEQISELNRQGRSVLIALGGADAHIELRNGQEQALADEIIRLVEVYGFDGLDIDLEQA
AVTAADNQTVIPAALRIVKDYYRDQGKNFLITMAPEFPYLTTGGKYVPYITELEGYYDWINPQFYNQGGDGIYIEGLGWI
AQNNDNLKQEFIYHIADALANGTNGFTKIPHDKLVFGIPTNIDAAATGYIKQPQKLYAAFEQLKAQGQPLRGVMTWSVNW
DMGKNSAGQAYNESFIKAYGPFIHGQDILPPEPDNGKPIFAGVSNARVKLGAQFDALAGVTARDMEDGDLTSDIQVEGAI
DTQTLGLYALTYRVSDSDDNLTEQVRTVEVYNTKPEIKGVANASILLGSAFDAMAGVSAIDAEDGDLTAQISVDGDVDTD
TLGQYSLTYRVSDSAGQQVEVLRTITVKEQGAVCDNAWDNATVYLGGETVSHAGKSWLAGWWTQGDEPGTTGEWGVWKAQ
GDSDCDGGLPPVVKPSLEVTGIAPRYVLEQGSVNIEFSASVNQTMVINASLVQGNTVFASSEMSVSNSASFTLLATDLTA
GSYDIVVNVEEQQLSSRTSINLVEEDSEGGDYPAYAAGTQYQAGDVVTNAGGVFECLPWPNSGWCSGSASHYAPGTGSAW
QDAWFAH

Sequences:

>Translated_727_residues
MKSLKLNLLGASIALAMGAISSPAMANGTDMVNPQAGVVVGYWHNWCDGSGYKGGIAPCVTLTDVDPQYNVVDVSFMKVY
GAVGTIPTFKLDPAIGLSEAQFIEQISELNRQGRSVLIALGGADAHIELRNGQEQALADEIIRLVEVYGFDGLDIDLEQA
AVTAADNQTVIPAALRIVKDYYRDQGKNFLITMAPEFPYLTTGGKYVPYITELEGYYDWINPQFYNQGGDGIYIEGLGWI
AQNNDNLKQEFIYHIADALANGTNGFTKIPHDKLVFGIPTNIDAAATGYIKQPQKLYAAFEQLKAQGQPLRGVMTWSVNW
DMGKNSAGQAYNESFIKAYGPFIHGQDILPPEPDNGKPIFAGVSNARVKLGAQFDALAGVTARDMEDGDLTSDIQVEGAI
DTQTLGLYALTYRVSDSDDNLTEQVRTVEVYNTKPEIKGVANASILLGSAFDAMAGVSAIDAEDGDLTAQISVDGDVDTD
TLGQYSLTYRVSDSAGQQVEVLRTITVKEQGAVCDNAWDNATVYLGGETVSHAGKSWLAGWWTQGDEPGTTGEWGVWKAQ
GDSDCDGGLPPVVKPSLEVTGIAPRYVLEQGSVNIEFSASVNQTMVINASLVQGNTVFASSEMSVSNSASFTLLATDLTA
GSYDIVVNVEEQQLSSRTSINLVEEDSEGGDYPAYAAGTQYQAGDVVTNAGGVFECLPWPNSGWCSGSASHYAPGTGSAW
QDAWFAH
>Mature_727_residues
MKSLKLNLLGASIALAMGAISSPAMANGTDMVNPQAGVVVGYWHNWCDGSGYKGGIAPCVTLTDVDPQYNVVDVSFMKVY
GAVGTIPTFKLDPAIGLSEAQFIEQISELNRQGRSVLIALGGADAHIELRNGQEQALADEIIRLVEVYGFDGLDIDLEQA
AVTAADNQTVIPAALRIVKDYYRDQGKNFLITMAPEFPYLTTGGKYVPYITELEGYYDWINPQFYNQGGDGIYIEGLGWI
AQNNDNLKQEFIYHIADALANGTNGFTKIPHDKLVFGIPTNIDAAATGYIKQPQKLYAAFEQLKAQGQPLRGVMTWSVNW
DMGKNSAGQAYNESFIKAYGPFIHGQDILPPEPDNGKPIFAGVSNARVKLGAQFDALAGVTARDMEDGDLTSDIQVEGAI
DTQTLGLYALTYRVSDSDDNLTEQVRTVEVYNTKPEIKGVANASILLGSAFDAMAGVSAIDAEDGDLTAQISVDGDVDTD
TLGQYSLTYRVSDSAGQQVEVLRTITVKEQGAVCDNAWDNATVYLGGETVSHAGKSWLAGWWTQGDEPGTTGEWGVWKAQ
GDSDCDGGLPPVVKPSLEVTGIAPRYVLEQGSVNIEFSASVNQTMVINASLVQGNTVFASSEMSVSNSASFTLLATDLTA
GSYDIVVNVEEQQLSSRTSINLVEEDSEGGDYPAYAAGTQYQAGDVVTNAGGVFECLPWPNSGWCSGSASHYAPGTGSAW
QDAWFAH

Specific function: Unknown

COG id: COG3469

COG function: function code G; Chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fibronectin type-III domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR015520 [H]

Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 77817; Mature: 77817

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLKLNLLGASIALAMGAISSPAMANGTDMVNPQAGVVVGYWHNWCDGSGYKGGIAPCV
CCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEE
TLTDVDPQYNVVDVSFMKVYGAVGTIPTFKLDPAIGLSEAQFIEQISELNRQGRSVLIAL
EEECCCCCCCEEEEEHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEE
GGADAHIELRNGQEQALADEIIRLVEVYGFDGLDIDLEQAAVTAADNQTVIPAALRIVKD
CCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHEEEECCCCEEHHHHHHHHHH
YYRDQGKNFLITMAPEFPYLTTGGKYVPYITELEGYYDWINPQFYNQGGDGIYIEGLGWI
HHHCCCCEEEEEECCCCCEEECCCEECCEEEECCCHHCCCCCEEECCCCCEEEEEEEEEE
AQNNDNLKQEFIYHIADALANGTNGFTKIPHDKLVFGIPTNIDAAATGYIKQPQKLYAAF
EECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
EQLKAQGQPLRGVMTWSVNWDMGKNSAGQAYNESFIKAYGPFIHGQDILPPEPDNGKPIF
HHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
AGVSNARVKLGAQFDALAGVTARDMEDGDLTSDIQVEGAIDTQTLGLYALTYRVSDSDDN
EECCCCEEEECCCHHHHCCCEECCCCCCCCCCCEEEECCCCCEEEEEEEEEEEECCCCCC
LTEQVRTVEVYNTKPEIKGVANASILLGSAFDAMAGVSAIDAEDGDLTAQISVDGDVDTD
HHHHEEEEEEECCCCCCCCCCCCEEEEECHHHHHHCCEEECCCCCCEEEEEEECCCCCCC
TLGQYSLTYRVSDSAGQQVEVLRTITVKEQGAVCDNAWDNATVYLGGETVSHAGKSWLAG
CCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEECCCHHHHCCCCCEEE
WWTQGDEPGTTGEWGVWKAQGDSDCDGGLPPVVKPSLEVTGIAPRYVLEQGSVNIEFSAS
ECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCHHHEEECCCEEEEEECC
VNQTMVINASLVQGNTVFASSEMSVSNSASFTLLATDLTAGSYDIVVNVEEQQLSSRTSI
CCEEEEEEEEEEECCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEHHHHHCCCCEE
NLVEEDSEGGDYPAYAAGTQYQAGDVVTNAGGVFECLPWPNSGWCSGSASHYAPGTGSAW
EEEEECCCCCCCCCEECCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
QDAWFAH
CCCCCCC
>Mature Secondary Structure
MKSLKLNLLGASIALAMGAISSPAMANGTDMVNPQAGVVVGYWHNWCDGSGYKGGIAPCV
CCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEE
TLTDVDPQYNVVDVSFMKVYGAVGTIPTFKLDPAIGLSEAQFIEQISELNRQGRSVLIAL
EEECCCCCCCEEEEEHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEE
GGADAHIELRNGQEQALADEIIRLVEVYGFDGLDIDLEQAAVTAADNQTVIPAALRIVKD
CCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHEEEECCCCEEHHHHHHHHHH
YYRDQGKNFLITMAPEFPYLTTGGKYVPYITELEGYYDWINPQFYNQGGDGIYIEGLGWI
HHHCCCCEEEEEECCCCCEEECCCEECCEEEECCCHHCCCCCEEECCCCCEEEEEEEEEE
AQNNDNLKQEFIYHIADALANGTNGFTKIPHDKLVFGIPTNIDAAATGYIKQPQKLYAAF
EECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
EQLKAQGQPLRGVMTWSVNWDMGKNSAGQAYNESFIKAYGPFIHGQDILPPEPDNGKPIF
HHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
AGVSNARVKLGAQFDALAGVTARDMEDGDLTSDIQVEGAIDTQTLGLYALTYRVSDSDDN
EECCCCEEEECCCHHHHCCCEECCCCCCCCCCCEEEECCCCCEEEEEEEEEEEECCCCCC
LTEQVRTVEVYNTKPEIKGVANASILLGSAFDAMAGVSAIDAEDGDLTAQISVDGDVDTD
HHHHEEEEEEECCCCCCCCCCCCEEEEECHHHHHHCCEEECCCCCCEEEEEEECCCCCCC
TLGQYSLTYRVSDSAGQQVEVLRTITVKEQGAVCDNAWDNATVYLGGETVSHAGKSWLAG
CCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEECCCHHHHCCCCCEEE
WWTQGDEPGTTGEWGVWKAQGDSDCDGGLPPVVKPSLEVTGIAPRYVLEQGSVNIEFSAS
ECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCHHHEEECCCEEEEEECC
VNQTMVINASLVQGNTVFASSEMSVSNSASFTLLATDLTAGSYDIVVNVEEQQLSSRTSI
CCEEEEEEEEEEECCEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEHHHHHCCCCEE
NLVEEDSEGGDYPAYAAGTQYQAGDVVTNAGGVFECLPWPNSGWCSGSASHYAPGTGSAW
EEEEECCCCCCCCCEECCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
QDAWFAH
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1729234 [H]