| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is hisC [H]
Identifier: 157963466
GI number: 157963466
Start: 4445229
End: 4446464
Strand: Reverse
Name: hisC [H]
Synonym: Spea_3654
Alternate gene names: 157963466
Gene position: 4446464-4445229 (Counterclockwise)
Preceding gene: 157963467
Following gene: 157963465
Centisome position: 85.93
GC content: 47.9
Gene sequence:
>1236_bases ATGCAGTCAAATCTAATTGAACAAGAGTTAGTTAAACAAGAGTTAGTCAAACAAGAGCTAAATAAATCCGGGCTAAATAA ACCAAAGCTGAATAAAATTAGCCGTCGTCAATTTCTCTATGCTGGCGCAGCTGTATCGAGCTTAGCCACCTTAGGTTGTA GTTCGAGCTCTGTCTCTACAGCTGCTAGTTCGACAACAGCGACCGGGATGAGTGCGGATGAAGCGGTCCCGCTCAACTTT AATGAAAATCCACTTGGTCTGGCACCTAAAGCGCAACAAGCCGTGCTTGATGCTCTACCTAATGCATGGCGCTATCCAGA TGCTGCGCGCAGTCAGTTGATGGCAGCTATTGCAGAGAGTATCTCCGTAGCAGAATCGCAACTCATCTATGGAAATGGCT CGTCAGAAGTATTGAAAATGGCACTGGATGCATTAGCGCAGACCAACAGTCAGCTAGTGATGCCAGACCCAAGCTATGGA GTGGTCATCGATTATGCCATGGCGCGTGGGATCCCAGTTCTTAAGGTGAAACTCGACGGTCAGTGGCAAACCGATCTCGC CAAAATGAAAGCGAAAGTGGCTGCACATAGTGGTCCGTCAATTGTGTATTTATGCAACCCTAATAACCCGACGGGTTTGT TATTGCCGCAAAGTGAATTGAATCAATGGTTAGATCAGGCATCGAGTCAGCTGAGTTTTATCGTCGATGAGGCTTATGTG GAATATGTCGCGCAAGCTGGGTTTGCATCGGCGGTTGAGCGGATTAAACAAGGCCAGCAGCATATCGTGGTCTGCAGAAC CTTTTCAAAGATCTATGCCTTAGCAGGCTTACGTGTCGGTTACGGTGTCGCTCATGCTGATTTAATCAAACAAATGCAGG CACAGGCCAGTATCGACAATGCCAACCTAATCGGTTGTGTTGCCGCTAAGGCCAGCCTTGAGAGCCCACAATGGTTAAGC CTAAGTCTGCAATCCAATAACCAAGCTAAGGCACTGGTGTATCAGCAGTTAGCTAAACTCGGTTTAGACTATCTGCCGAG CGAAACTAACTTTATCTTCCACAAGGTGAATGGTGACAGTGAGCTGTATATGCAGCGCATGGCAAAGGCGGGTATTTTAG TCGGGCGTCCATTTAACCATGGTGAGGGATGGAACCGTCTGTCAATCGGCACACCAGCGCAGATGCAATACTTCAGCAAG GCTTTAGCAAAGTTTCGCGAACTCGGCTGGGTGTAG
Upstream 100 bases:
>100_bases TTTGTGATCTTGATTGCAAATCCCTCTCGCTTAACTAGCGGGAATGTTAGTTTCATATAATTATCTGTCGTAGGTAATAA TTCAATAATAATAAATAAAT
Downstream 100 bases:
>100_bases CTAAGAATAGTTTTTGAACCATTCCGCTCGCCTGTATTAAGTATTGCAATACTTAATACAGGCAGTGTGAGCTCGATAAA AGCTACTTGTTACCTTAAAA
Product: class I/II aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MQSNLIEQELVKQELVKQELNKSGLNKPKLNKISRRQFLYAGAAVSSLATLGCSSSSVSTAASSTTATGMSADEAVPLNF NENPLGLAPKAQQAVLDALPNAWRYPDAARSQLMAAIAESISVAESQLIYGNGSSEVLKMALDALAQTNSQLVMPDPSYG VVIDYAMARGIPVLKVKLDGQWQTDLAKMKAKVAAHSGPSIVYLCNPNNPTGLLLPQSELNQWLDQASSQLSFIVDEAYV EYVAQAGFASAVERIKQGQQHIVVCRTFSKIYALAGLRVGYGVAHADLIKQMQAQASIDNANLIGCVAAKASLESPQWLS LSLQSNNQAKALVYQQLAKLGLDYLPSETNFIFHKVNGDSELYMQRMAKAGILVGRPFNHGEGWNRLSIGTPAQMQYFSK ALAKFRELGWV
Sequences:
>Translated_411_residues MQSNLIEQELVKQELVKQELNKSGLNKPKLNKISRRQFLYAGAAVSSLATLGCSSSSVSTAASSTTATGMSADEAVPLNF NENPLGLAPKAQQAVLDALPNAWRYPDAARSQLMAAIAESISVAESQLIYGNGSSEVLKMALDALAQTNSQLVMPDPSYG VVIDYAMARGIPVLKVKLDGQWQTDLAKMKAKVAAHSGPSIVYLCNPNNPTGLLLPQSELNQWLDQASSQLSFIVDEAYV EYVAQAGFASAVERIKQGQQHIVVCRTFSKIYALAGLRVGYGVAHADLIKQMQAQASIDNANLIGCVAAKASLESPQWLS LSLQSNNQAKALVYQQLAKLGLDYLPSETNFIFHKVNGDSELYMQRMAKAGILVGRPFNHGEGWNRLSIGTPAQMQYFSK ALAKFRELGWV >Mature_411_residues MQSNLIEQELVKQELVKQELNKSGLNKPKLNKISRRQFLYAGAAVSSLATLGCSSSSVSTAASSTTATGMSADEAVPLNF NENPLGLAPKAQQAVLDALPNAWRYPDAARSQLMAAIAESISVAESQLIYGNGSSEVLKMALDALAQTNSQLVMPDPSYG VVIDYAMARGIPVLKVKLDGQWQTDLAKMKAKVAAHSGPSIVYLCNPNNPTGLLLPQSELNQWLDQASSQLSFIVDEAYV EYVAQAGFASAVERIKQGQQHIVVCRTFSKIYALAGLRVGYGVAHADLIKQMQAQASIDNANLIGCVAAKASLESPQWLS LSLQSNNQAKALVYQQLAKLGLDYLPSETNFIFHKVNGDSELYMQRMAKAGILVGRPFNHGEGWNRLSIGTPAQMQYFSK ALAKFRELGWV
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=370, Percent_Identity=25.1351351351351, Blast_Score=101, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6322075, Length=372, Percent_Identity=25.2688172043011, Blast_Score=76, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 44455; Mature: 44455
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSNLIEQELVKQELVKQELNKSGLNKPKLNKISRRQFLYAGAAVSSLATLGCSSSSVST CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH AASSTTATGMSADEAVPLNFNENPLGLAPKAQQAVLDALPNAWRYPDAARSQLMAAIAES HCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ISVAESQLIYGNGSSEVLKMALDALAQTNSQLVMPDPSYGVVIDYAMARGIPVLKVKLDG HHHHHCEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEHHHCCCEEEEEEECC QWQTDLAKMKAKVAAHSGPSIVYLCNPNNPTGLLLPQSELNQWLDQASSQLSFIVDEAYV CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH EYVAQAGFASAVERIKQGQQHIVVCRTFSKIYALAGLRVGYGVAHADLIKQMQAQASIDN HHHHHCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC ANLIGCVAAKASLESPQWLSLSLQSNNQAKALVYQQLAKLGLDYLPSETNFIFHKVNGDS CCEEEEEEHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHCCCCCCCEEEEEECCCH ELYMQRMAKAGILVGRPFNHGEGWNRLSIGTPAQMQYFSKALAKFRELGWV HHHHHHHHHCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQSNLIEQELVKQELVKQELNKSGLNKPKLNKISRRQFLYAGAAVSSLATLGCSSSSVST CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH AASSTTATGMSADEAVPLNFNENPLGLAPKAQQAVLDALPNAWRYPDAARSQLMAAIAES HCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ISVAESQLIYGNGSSEVLKMALDALAQTNSQLVMPDPSYGVVIDYAMARGIPVLKVKLDG HHHHHCEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEHHHCCCEEEEEEECC QWQTDLAKMKAKVAAHSGPSIVYLCNPNNPTGLLLPQSELNQWLDQASSQLSFIVDEAYV CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH EYVAQAGFASAVERIKQGQQHIVVCRTFSKIYALAGLRVGYGVAHADLIKQMQAQASIDN HHHHHCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC ANLIGCVAAKASLESPQWLSLSLQSNNQAKALVYQQLAKLGLDYLPSETNFIFHKVNGDS CCEEEEEEHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHCCCCCCCEEEEEECCCH ELYMQRMAKAGILVGRPFNHGEGWNRLSIGTPAQMQYFSKALAKFRELGWV HHHHHHHHHCCEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA