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The map label for this gene is xp55 [H]

Identifier: 157963456

GI number: 157963456

Start: 4431806

End: 4433338

Strand: Reverse

Name: xp55 [H]

Synonym: Spea_3644

Alternate gene names: 157963456

Gene position: 4433338-4431806 (Counterclockwise)

Preceding gene: 157963459

Following gene: 157963455

Centisome position: 85.68

GC content: 51.47

Gene sequence:

>1533_bases
GTGAAGTCGTTAATCCTATTCATTCTATCTATCTCTTTATTGCCCCTACCGAGTGTTGCCAGCACAGATAAAGTGCTGAC
ACTTGCCTTAGGCGCCGAGCCTGAAACGGGTTTCGATCCTATTTATGGCTGGGGTAAATATAATCGACCATTGTTTCAGT
CGACCCTGATAAAACGCGATAACGCCTTAGCCTTGGTGAGCGATCTTGCGCTGCGATGGCGCCTCAGTGATGATCGCCTT
GTCTGGTCTGTCGATCTTCGCCAAGGAGTTAAGTTTAATGACGGCACTGGGTTAACCGCAAGCGACGTGAAATTTAGCTT
CGATACTGCCAAGCAAAGTGCCTCGTTGCATGACTTAACTCAGCTCGAACGGGTTGAGATCAAGGGGGACTACAGTGTTG
AGTTCTATCTTAAACAGGCCGACATTACCTTTATTGATAACTTGGTTAATTTAGCTATCGTTCCCAAGGCGAGCTATGGC
GCTCAATATGGCCTAAAGCCTATTGGTTCAGGGCCGCTAGCGTTTGTGCGCTGGGATAGAAACCAGCAGCTTATCATGGA
GCCGAACCCTTACTATTACGGACAAAAGCCTGAGTTTTCTAAGGTCATAGTGACCTTTAGTGATGAGGATAGCCGTTATG
CAAGGTTGCGTTCTGGCCAGTTAGATCTTGCTGCGATCGCACCGCGTTACGCCAAGATATTACCGCCGGGCTACAAGCTG
TGGAGCATAGATAGCGTCGATAACCGTGGTATCGCTTGGCCCATGGTGGCAACTCAAGCAGATAACATAGGCAACGATGT
CACATCCGATGCGGCGATCCGTCAAGCTGTGGATATGGCTGTCGATCGTGATGTGTTGGTGCAGCAGTTGCTCGACGGTT
TTGCCACTCCAGCCTATTCGATAGCCGATGGTTTACCTTGGGGGCCTGCACAGACACAATCGAGCCAACCAGATCTCGCT
GCGGCTAAGCGGCTACTCGAACAAAACGGTTGGCAGGTTAAACAAGGGCGACGTTATCGTGATGGGGTGGCGGCCAGCAT
GACCCTCTATTACCTCGCGGGTGACACTGTGCGTCAACAGCTGGCGCTGGCGGTCGCGCAGATGGTTAAGCCGTTAGGCA
TAGAGATAAAACCTGAAGGTAAGAGCTGGGAAGCGATCTATCTACAGATGCATCGCCAGCCGGTACTGTTAGGCTTTGGT
AGCCACAGTGCCACCGAGGTCAGGGCTGTTTATCATAGTGCGAGTCGGGGCAAAGGCTATTTCAACTCGGGTTACTATAG
CAACCCAGAGGTCGATAGGGCACTAGATAGCGCTCAGGCGGCAGCGTCATGGTCTGAATCATTACCCTATTGGCAACAGG
CACAAGCCTTGATCGCGGCAGATCGCCCTTGGACTTGGTTAGTCAATTTAAAGCACCTCTATGCGGCGAATGAATGCCTA
GATCTTGCCAAACCAGGCATCGAGGCCCACGGACATGGTTGGCCGCTTGCCAATAATATCGAGCAGTGGCGTTGGCAGTG
TCCGAGTCGATGA

Upstream 100 bases:

>100_bases
ATGCTGTATTTAGTTTTGTTGAGGAGCTGTTTTACTAAACAATTGGGTGTAGTGTGACGATTCTAAAAATAGTATTACTC
AATGGATTGTTGGTGAACTT

Downstream 100 bases:

>100_bases
GCAACTTATCCTCCTCGATATTGCACACCGGCCTGCGTTTGCTGTTGCTGCTCTTTCTCGTTGTCGTGTTTGCCTATGTT
TTGCTAAGTTGGTCGCCACT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MKSLILFILSISLLPLPSVASTDKVLTLALGAEPETGFDPIYGWGKYNRPLFQSTLIKRDNALALVSDLALRWRLSDDRL
VWSVDLRQGVKFNDGTGLTASDVKFSFDTAKQSASLHDLTQLERVEIKGDYSVEFYLKQADITFIDNLVNLAIVPKASYG
AQYGLKPIGSGPLAFVRWDRNQQLIMEPNPYYYGQKPEFSKVIVTFSDEDSRYARLRSGQLDLAAIAPRYAKILPPGYKL
WSIDSVDNRGIAWPMVATQADNIGNDVTSDAAIRQAVDMAVDRDVLVQQLLDGFATPAYSIADGLPWGPAQTQSSQPDLA
AAKRLLEQNGWQVKQGRRYRDGVAASMTLYYLAGDTVRQQLALAVAQMVKPLGIEIKPEGKSWEAIYLQMHRQPVLLGFG
SHSATEVRAVYHSASRGKGYFNSGYYSNPEVDRALDSAQAAASWSESLPYWQQAQALIAADRPWTWLVNLKHLYAANECL
DLAKPGIEAHGHGWPLANNIEQWRWQCPSR

Sequences:

>Translated_510_residues
MKSLILFILSISLLPLPSVASTDKVLTLALGAEPETGFDPIYGWGKYNRPLFQSTLIKRDNALALVSDLALRWRLSDDRL
VWSVDLRQGVKFNDGTGLTASDVKFSFDTAKQSASLHDLTQLERVEIKGDYSVEFYLKQADITFIDNLVNLAIVPKASYG
AQYGLKPIGSGPLAFVRWDRNQQLIMEPNPYYYGQKPEFSKVIVTFSDEDSRYARLRSGQLDLAAIAPRYAKILPPGYKL
WSIDSVDNRGIAWPMVATQADNIGNDVTSDAAIRQAVDMAVDRDVLVQQLLDGFATPAYSIADGLPWGPAQTQSSQPDLA
AAKRLLEQNGWQVKQGRRYRDGVAASMTLYYLAGDTVRQQLALAVAQMVKPLGIEIKPEGKSWEAIYLQMHRQPVLLGFG
SHSATEVRAVYHSASRGKGYFNSGYYSNPEVDRALDSAQAAASWSESLPYWQQAQALIAADRPWTWLVNLKHLYAANECL
DLAKPGIEAHGHGWPLANNIEQWRWQCPSR
>Mature_510_residues
MKSLILFILSISLLPLPSVASTDKVLTLALGAEPETGFDPIYGWGKYNRPLFQSTLIKRDNALALVSDLALRWRLSDDRL
VWSVDLRQGVKFNDGTGLTASDVKFSFDTAKQSASLHDLTQLERVEIKGDYSVEFYLKQADITFIDNLVNLAIVPKASYG
AQYGLKPIGSGPLAFVRWDRNQQLIMEPNPYYYGQKPEFSKVIVTFSDEDSRYARLRSGQLDLAAIAPRYAKILPPGYKL
WSIDSVDNRGIAWPMVATQADNIGNDVTSDAAIRQAVDMAVDRDVLVQQLLDGFATPAYSIADGLPWGPAQTQSSQPDLA
AAKRLLEQNGWQVKQGRRYRDGVAASMTLYYLAGDTVRQQLALAVAQMVKPLGIEIKPEGKSWEAIYLQMHRQPVLLGFG
SHSATEVRAVYHSASRGKGYFNSGYYSNPEVDRALDSAQAAASWSESLPYWQQAQALIAADRPWTWLVNLKHLYAANECL
DLAKPGIEAHGHGWPLANNIEQWRWQCPSR

Specific function: Required for transport of an unidentified substrate [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=515, Percent_Identity=26.4077669902913, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI1787762, Length=514, Percent_Identity=24.7081712062257, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1789887, Length=338, Percent_Identity=24.8520710059172, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1789966, Length=371, Percent_Identity=22.911051212938, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 56760; Mature: 56760

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLILFILSISLLPLPSVASTDKVLTLALGAEPETGFDPIYGWGKYNRPLFQSTLIKRD
CHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
NALALVSDLALRWRLSDDRLVWSVDLRQGVKFNDGTGLTASDVKFSFDTAKQSASLHDLT
CHHHHHHHHEEEEEECCCCEEEEEECCCCCEECCCCCCCCCCEEEEEHHHHHCCCHHHHH
QLERVEIKGDYSVEFYLKQADITFIDNLVNLAIVPKASYGAQYGLKPIGSGPLAFVRWDR
HHHEEEECCCCEEEEEEEECCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEECC
NQQLIMEPNPYYYGQKPEFSKVIVTFSDEDSRYARLRSGQLDLAAIAPRYAKILPPGYKL
CCEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCEEHHHHCCHHHHHCCCCCEE
WSIDSVDNRGIAWPMVATQADNIGNDVTSDAAIRQAVDMAVDRDVLVQQLLDGFATPAYS
EEECCCCCCCEECEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IADGLPWGPAQTQSSQPDLAAAKRLLEQNGWQVKQGRRYRDGVAASMTLYYLAGDTVRQQ
HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCCEEEEEEEEECCHHHHHH
LALAVAQMVKPLGIEIKPEGKSWEAIYLQMHRQPVLLGFGSHSATEVRAVYHSASRGKGY
HHHHHHHHHHHCCCEECCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCC
FNSGYYSNPEVDRALDSAQAAASWSESLPYWQQAQALIAADRPWTWLVNLKHLYAANECL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCEEEEEEHHHHHHHHHHH
DLAKPGIEAHGHGWPLANNIEQWRWQCPSR
HHHCCCCCCCCCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MKSLILFILSISLLPLPSVASTDKVLTLALGAEPETGFDPIYGWGKYNRPLFQSTLIKRD
CHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
NALALVSDLALRWRLSDDRLVWSVDLRQGVKFNDGTGLTASDVKFSFDTAKQSASLHDLT
CHHHHHHHHEEEEEECCCCEEEEEECCCCCEECCCCCCCCCCEEEEEHHHHHCCCHHHHH
QLERVEIKGDYSVEFYLKQADITFIDNLVNLAIVPKASYGAQYGLKPIGSGPLAFVRWDR
HHHEEEECCCCEEEEEEEECCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEECC
NQQLIMEPNPYYYGQKPEFSKVIVTFSDEDSRYARLRSGQLDLAAIAPRYAKILPPGYKL
CCEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCEEHHHHCCHHHHHCCCCCEE
WSIDSVDNRGIAWPMVATQADNIGNDVTSDAAIRQAVDMAVDRDVLVQQLLDGFATPAYS
EEECCCCCCCEECEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
IADGLPWGPAQTQSSQPDLAAAKRLLEQNGWQVKQGRRYRDGVAASMTLYYLAGDTVRQQ
HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHCCCEEEEEEEEECCHHHHHH
LALAVAQMVKPLGIEIKPEGKSWEAIYLQMHRQPVLLGFGSHSATEVRAVYHSASRGKGY
HHHHHHHHHHHCCCEECCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCC
FNSGYYSNPEVDRALDSAQAAASWSESLPYWQQAQALIAADRPWTWLVNLKHLYAANECL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCEEEEEEHHHHHHHHHHH
DLAKPGIEAHGHGWPLANNIEQWRWQCPSR
HHHCCCCCCCCCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]