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The map label for this gene is yrbA [H]

Identifier: 157963418

GI number: 157963418

Start: 4399008

End: 4399259

Strand: Reverse

Name: yrbA [H]

Synonym: Spea_3604

Alternate gene names: 157963418

Gene position: 4399259-4399008 (Counterclockwise)

Preceding gene: 157963419

Following gene: 157963417

Centisome position: 85.02

GC content: 42.06

Gene sequence:

>252_bases
ATGGAATGCAAAGAAATTGAAACCATCCTTTTAGACGCGCTTTCTTTAGAGGAAGTTAAAGTGACCCAAGAGGGAACACA
CTACAAGATTATTGCTGTAGGTGAGTGCTTTGACGGTATGGGACGAGTGAAGCAGCAGCAAACAATTTACGGCCCATTAA
TGGCTCACATTACTAGCGGTGAGTTACACGCTATTACGATTAATGCCTTCACGCCTACACAGTGGAAGCGTGAAAAAGTC
TTTAATATGTAA

Upstream 100 bases:

>100_bases
TTAAAGCTGGTATCCCCTTCAGAGCAGCTTAAGAAATTTATTATATTATACGATTTAAACGACTTCTTTATCGAAGAAGC
TAAGTAAGGTGAACTGTTCC

Downstream 100 bases:

>100_bases
TCGCGGATTTAGAGAGTTAAAGTGGATAAATTAAAAATTGAAGCAAGTGGTGCACTTGCTGGAAACGTGGTTATCTCAGG
TGCTAAAAATGCCGCATTGC

Product: BolA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MECKEIETILLDALSLEEVKVTQEGTHYKIIAVGECFDGMGRVKQQQTIYGPLMAHITSGELHAITINAFTPTQWKREKV
FNM

Sequences:

>Translated_83_residues
MECKEIETILLDALSLEEVKVTQEGTHYKIIAVGECFDGMGRVKQQQTIYGPLMAHITSGELHAITINAFTPTQWKREKV
FNM
>Mature_83_residues
MECKEIETILLDALSLEEVKVTQEGTHYKIIAVGECFDGMGRVKQQQTIYGPLMAHITSGELHAITINAFTPTQWKREKV
FNM

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

Organism=Escherichia coli, GI87082226, Length=82, Percent_Identity=53.6585365853659, Blast_Score=112, Evalue=7e-27,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 9412; Mature: 9412

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECKEIETILLDALSLEEVKVTQEGTHYKIIAVGECFDGMGRVKQQQTIYGPLMAHITSG
CCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHEEEECCC
ELHAITINAFTPTQWKREKVFNM
CEEEEEEECCCCCCCCHHHCCCC
>Mature Secondary Structure
MECKEIETILLDALSLEEVKVTQEGTHYKIIAVGECFDGMGRVKQQQTIYGPLMAHITSG
CCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHEEEECCC
ELHAITINAFTPTQWKREKVFNM
CEEEEEEECCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]