| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963393
Identifier: 157963393
GI number: 157963393
Start: 4369592
End: 4370854
Strand: Reverse
Name: 157963393
Synonym: Spea_3579
Alternate gene names: NA
Gene position: 4370854-4369592 (Counterclockwise)
Preceding gene: 157963394
Following gene: 157963392
Centisome position: 84.47
GC content: 47.35
Gene sequence:
>1263_bases ATGTCGCCACTGGCTTTTGCCGCGCCAACTTCGACTGAGATAACTAAAGAGCAGCGTTCGGGCGAAGAAACTGTGATTAT AGAATCTGTTTCGCCTAAGGCTACAGCCAAGTCTAAGCAGGGCGATGATAAGCTACCCGATTATCAAGCAGAGTTTGCAG CGGTGCCTTTCGCTTTTTCCAGTGAAAGTTTAAGTACCGCCTTTGGTGGAGCCGGTGTACTTAAACACGCCGGGCAGATC CAGTCCTCGATATTGGGTATTGGTGTATATAGCACCAATAATAGTTGGGTAAGTTACCTGCGTTTTAACGACTACCAAAT TCCTTCCATTGATCAATGGTTATTCTCGATAGAAACTTATCAAGCCCGCTTTCAAGAGGGGGTCTATTATGTGCCGCAGC AAGCTGGAGCCTTGGGAGAGAACGAGCGAACAATAACCTTAGGTGATGAATCTTATACTAAGTTTCATGCCAGATATATT TTGCCAATAGGACGTGGTAGTCAAGGTACTGTGCGTAGCCTTGGGCGTGCAAGAGGCGATATTAGTTGGAACCCACTCGA ATCAGGTGTCACCAGCCTAAAATTTAGCCCTTTTAGCCAGAGTCGGGAGTTAGAGGGCTTTGAGTTTTTACCCGAAGAGG CCAAGGGGCTTGCGCTAGAGCTAGATTGGGATAACCGTGATAACGGCAAAAATAGTAGTCAAGGCGGACAAACAAGCTTC AAGGTGACTCGCGACTTTGGTAGCGGTTCTCGCAATAGTTGGACCACTTGGGAGTTTGAGCAAAGCGCTTTCGTGTCTAT CGATTCTAATGAATGGTTTGGTCAGCAAATTTTAGCGTTTAACTTTTATTTAGCCGATACGCCAACTTGGACCTCAGGTT CTGAAGATGACTTGCATCAACCCCCTAGTTTTGCAGGGATAAGCTTAGGCGGATTTGAACGCCTGCGTGGTTACACCAGC AAGCGTTACACTGGCCGCTCAGCAGTGCTCTATAGCGCAGAATATCGCGTGCAACCTAGATGGCAACCATTGCAAGAGTG GCCAGTATTTAACTTATACGATGTGCCTTGGTGGCAGTGGGTTGCCTTTGCTGAGGCGGGGCAGGTGAGTGATGACTTTA ATGCCAGCGCGTTACATGAAGATTTGAAGTGGTCGGCAGGTTTTGGAGCGCGATTTGAAGTTGAAAGTATCGTAGTGCGT GCAGAGCTTGCTTTTAGCGCCGAATCGAATCAATTCTGGATCATGGTGAATCAACCATTCTAA
Upstream 100 bases:
>100_bases TTATTCTGTAGTGGTGATTGAGGCTGGATGCCCTTCATCAGAATGAAGATCTTTTAAATTGAAAACTTATTTATTGCGTA CTTTTACCGCATTAGGGCTA
Downstream 100 bases:
>100_bases GCGGCTTATTGTTTTAATCCCTGTGGTGGGAGGCTGTTTAAAGTGCAGCCTCTAGCTAAAATTGTTCTTGAGTAGAATAG TCTAGGGGGAGATCTACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MSPLAFAAPTSTEITKEQRSGEETVIIESVSPKATAKSKQGDDKLPDYQAEFAAVPFAFSSESLSTAFGGAGVLKHAGQI QSSILGIGVYSTNNSWVSYLRFNDYQIPSIDQWLFSIETYQARFQEGVYYVPQQAGALGENERTITLGDESYTKFHARYI LPIGRGSQGTVRSLGRARGDISWNPLESGVTSLKFSPFSQSRELEGFEFLPEEAKGLALELDWDNRDNGKNSSQGGQTSF KVTRDFGSGSRNSWTTWEFEQSAFVSIDSNEWFGQQILAFNFYLADTPTWTSGSEDDLHQPPSFAGISLGGFERLRGYTS KRYTGRSAVLYSAEYRVQPRWQPLQEWPVFNLYDVPWWQWVAFAEAGQVSDDFNASALHEDLKWSAGFGARFEVESIVVR AELAFSAESNQFWIMVNQPF
Sequences:
>Translated_420_residues MSPLAFAAPTSTEITKEQRSGEETVIIESVSPKATAKSKQGDDKLPDYQAEFAAVPFAFSSESLSTAFGGAGVLKHAGQI QSSILGIGVYSTNNSWVSYLRFNDYQIPSIDQWLFSIETYQARFQEGVYYVPQQAGALGENERTITLGDESYTKFHARYI LPIGRGSQGTVRSLGRARGDISWNPLESGVTSLKFSPFSQSRELEGFEFLPEEAKGLALELDWDNRDNGKNSSQGGQTSF KVTRDFGSGSRNSWTTWEFEQSAFVSIDSNEWFGQQILAFNFYLADTPTWTSGSEDDLHQPPSFAGISLGGFERLRGYTS KRYTGRSAVLYSAEYRVQPRWQPLQEWPVFNLYDVPWWQWVAFAEAGQVSDDFNASALHEDLKWSAGFGARFEVESIVVR AELAFSAESNQFWIMVNQPF >Mature_419_residues SPLAFAAPTSTEITKEQRSGEETVIIESVSPKATAKSKQGDDKLPDYQAEFAAVPFAFSSESLSTAFGGAGVLKHAGQIQ SSILGIGVYSTNNSWVSYLRFNDYQIPSIDQWLFSIETYQARFQEGVYYVPQQAGALGENERTITLGDESYTKFHARYIL PIGRGSQGTVRSLGRARGDISWNPLESGVTSLKFSPFSQSRELEGFEFLPEEAKGLALELDWDNRDNGKNSSQGGQTSFK VTRDFGSGSRNSWTTWEFEQSAFVSIDSNEWFGQQILAFNFYLADTPTWTSGSEDDLHQPPSFAGISLGGFERLRGYTSK RYTGRSAVLYSAEYRVQPRWQPLQEWPVFNLYDVPWWQWVAFAEAGQVSDDFNASALHEDLKWSAGFGARFEVESIVVRA ELAFSAESNQFWIMVNQPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47026; Mature: 46895
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLAFAAPTSTEITKEQRSGEETVIIESVSPKATAKSKQGDDKLPDYQAEFAAVPFAFS CCCCEECCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHEEECEEEC SESLSTAFGGAGVLKHAGQIQSSILGIGVYSTNNSWVSYLRFNDYQIPSIDQWLFSIETY CCCHHHHCCCCHHHHHHHHHHHCEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHH QARFQEGVYYVPQQAGALGENERTITLGDESYTKFHARYILPIGRGSQGTVRSLGRARGD HHHHHCCEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHCCC ISWNPLESGVTSLKFSPFSQSRELEGFEFLPEEAKGLALELDWDNRDNGKNSSQGGQTSF CCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEE KVTRDFGSGSRNSWTTWEFEQSAFVSIDSNEWFGQQILAFNFYLADTPTWTSGSEDDLHQ EEEECCCCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC PPSFAGISLGGFERLRGYTSKRYTGRSAVLYSAEYRVQPRWQPLQEWPVFNLYDVPWWQW CCCCCCEECCCHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCHHHCCCCEEECCCHHHH VAFAEAGQVSDDFNASALHEDLKWSAGFGARFEVESIVVRAELAFSAESNQFWIMVNQPF HHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEECCCCEEEEEEECCC >Mature Secondary Structure SPLAFAAPTSTEITKEQRSGEETVIIESVSPKATAKSKQGDDKLPDYQAEFAAVPFAFS CCCEECCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHEEECEEEC SESLSTAFGGAGVLKHAGQIQSSILGIGVYSTNNSWVSYLRFNDYQIPSIDQWLFSIETY CCCHHHHCCCCHHHHHHHHHHHCEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHH QARFQEGVYYVPQQAGALGENERTITLGDESYTKFHARYILPIGRGSQGTVRSLGRARGD HHHHHCCEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHCCC ISWNPLESGVTSLKFSPFSQSRELEGFEFLPEEAKGLALELDWDNRDNGKNSSQGGQTSF CCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEE KVTRDFGSGSRNSWTTWEFEQSAFVSIDSNEWFGQQILAFNFYLADTPTWTSGSEDDLHQ EEEECCCCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC PPSFAGISLGGFERLRGYTSKRYTGRSAVLYSAEYRVQPRWQPLQEWPVFNLYDVPWWQW CCCCCCEECCCHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCHHHCCCCEEECCCHHHH VAFAEAGQVSDDFNASALHEDLKWSAGFGARFEVESIVVRAELAFSAESNQFWIMVNQPF HHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEECCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA