| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963360
Identifier: 157963360
GI number: 157963360
Start: 4330369
End: 4330824
Strand: Reverse
Name: 157963360
Synonym: Spea_3546
Alternate gene names: NA
Gene position: 4330824-4330369 (Counterclockwise)
Preceding gene: 157963361
Following gene: 157963359
Centisome position: 83.69
GC content: 39.69
Gene sequence:
>456_bases ATGCGTATTCAACAACTCAGTGAACTTCTAGATTATGTGGCGAGATGTCGCATAGAGATGGCGCAACTCTATAGCCGTTT GCATGCTAATGCTGACTCTTCTAGGGTAAAGTTGATGTTAGAGTATTTTCAGCAACACGAACGCAATACCTCTGAAAAGT TAGAAAACTATATTGATGAAGCTCCGAGAAAAATTCTAGACACTTGGTATAAAGATATTGTTTTTGAAGATTTTATTGGA CACTGCCAGAAGCTTACTTTGCCAGCCAATATGAGTGAAGATGATGTGCTGGAACTTCATTTAAAATTGGATAACAGCTT AATCGGGCTGCTAGAGAAGACTGCTAACTCATCAGCTACGGCTGAAACAAAAGGCGCATTAGATGATCTCGTGAGAGTCG AAAAAATCCAACAGCAACGCCTTGTTCACAGTAGCATTCGAATGGATGATATCTAA
Upstream 100 bases:
>100_bases TGACTGCGTTCAAATAATAAGTCGCTTTTTCATACCATAATAAAAAATGACTAATATTTGGCCGTGTCACTCTTAATGTG GCGGACTAAGGAGAGGAAAA
Downstream 100 bases:
>100_bases GCTTAAATTTGACTTAGTTAACGAAGGCACCGTGAGGTGCCTTTTTTGATTGAATATTGCAGCAGATTGAGCCGCTATAA TTGTTGAAGATCAAACTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRIQQLSELLDYVARCRIEMAQLYSRLHANADSSRVKLMLEYFQQHERNTSEKLENYIDEAPRKILDTWYKDIVFEDFIG HCQKLTLPANMSEDDVLELHLKLDNSLIGLLEKTANSSATAETKGALDDLVRVEKIQQQRLVHSSIRMDDI
Sequences:
>Translated_151_residues MRIQQLSELLDYVARCRIEMAQLYSRLHANADSSRVKLMLEYFQQHERNTSEKLENYIDEAPRKILDTWYKDIVFEDFIG HCQKLTLPANMSEDDVLELHLKLDNSLIGLLEKTANSSATAETKGALDDLVRVEKIQQQRLVHSSIRMDDI >Mature_151_residues MRIQQLSELLDYVARCRIEMAQLYSRLHANADSSRVKLMLEYFQQHERNTSEKLENYIDEAPRKILDTWYKDIVFEDFIG HCQKLTLPANMSEDDVLELHLKLDNSLIGLLEKTANSSATAETKGALDDLVRVEKIQQQRLVHSSIRMDDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17580; Mature: 17580
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIQQLSELLDYVARCRIEMAQLYSRLHANADSSRVKLMLEYFQQHERNTSEKLENYIDE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH APRKILDTWYKDIVFEDFIGHCQKLTLPANMSEDDVLELHLKLDNSLIGLLEKTANSSAT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC AETKGALDDLVRVEKIQQQRLVHSSIRMDDI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRIQQLSELLDYVARCRIEMAQLYSRLHANADSSRVKLMLEYFQQHERNTSEKLENYIDE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH APRKILDTWYKDIVFEDFIGHCQKLTLPANMSEDDVLELHLKLDNSLIGLLEKTANSSAT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC AETKGALDDLVRVEKIQQQRLVHSSIRMDDI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA