| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is hflK [H]
Identifier: 157963352
GI number: 157963352
Start: 4321121
End: 4322272
Strand: Reverse
Name: hflK [H]
Synonym: Spea_3538
Alternate gene names: 157963352
Gene position: 4322272-4321121 (Counterclockwise)
Preceding gene: 157963353
Following gene: 157963351
Centisome position: 83.53
GC content: 45.31
Gene sequence:
>1152_bases ATGGCTTGGAACGAGCCCGGTAACAAGGGTCAAGACCCTTGGGGAAATGGCAATAAAGGTGGTAATGATAAAGGACCACC AGATTTAGATGAAGTTTTTCGTAACCTTTCTAAGCGCTTCGGTGGCAAGGGTAATGGTTCTGGAGGCAGCATTAGTGCGG CCAGCTTAATCATTGTTCTAGTTATCGCAATAGTTGTATGGGGACTTTCAGGTTTCTATACGGTTAAAGAAGCTGAGAAA GGTGTTGCTCTTCGTTTTGGCGAATATATCGGGGAAGTCGATCCAGGCCTTCAATGGAAAGCCACTTTTATTGATGAAGT GACGCCTGTAAACGTACAAACGGTTCGTTCTATTCCAGCTTCTGGAAGTATGCTAACAGCCGACGAAAACGTTGTCCTTG TTCAACTAGATGTGCAGTATCGAGTGAGTAACGCGAAAGATTACCTCTATAGCGTAGTCGATGCAGATGCGAGTTTGCGT GAGGCGACAGATAGCGCGCTACGTTACGTTATCGGCCATAACACTATGGATGATATCTTGACTACTGGTCGTGATAAAAT TCGTCGTGACACATGGGACGAAATCGAGCGAATTATCAAACCGTATAAACTCGGTATTTCAGTTGTTGATGTGAACTTCT TGCCAGCTCGTCCACCAGAAGAGGTGAAAGATGCCTTCGATGATGCGATTGCAGCACAAGAGGATGAGCAACGTTTCATT CGTGAAGCTGAAGCTTACTCACGTCAGTTAGAGCCAAAGGTTCGTGGTACTGTACAGCGCATGGATCAACAAGCGATTGC TTATAAGCAGCGAGTGATTTTAGAAGCGAAAGGTAAAGTAGCTCGTTTCGAACAGTTACTGCCTGAGTATCAAGCGGCGC CAGAAGTGACTCGCGAACGTATGTACTTTGATACGATGCAGGAAGTTATGAGTGGCACCAATAAAGTTCTTATCGATGCC AAGAATAGTGGTAACTTGATGTATTTACCATTAGACAAGTTGATGCAGAATAGCCAGTCGCATAAGTCTGCCAGCACTAA TACTAAACCGGCAAAGCCTGCGATGTCAGTTAATAGTACAACTCACACTAACAGCAGCATTCCTCTCGATGGTCGCCCAT CTAGAGGTGAACGTTCGTTGGGGAGGAACTAA
Upstream 100 bases:
>100_bases CAGAGCCAAGGTGAATTAGAGACTTTTGTGGTCGACCCAGTCGTCGCATAATTAAGTATTTTAGTAATCTCGTTTATTTC ATACACTTATGGAGTACTAA
Downstream 100 bases:
>100_bases GTGATGGGTAGATTTACAGCGATAATCGTAGCGGTGCTTATTGCGATTTCATTGTCTTCACTTTTGGTTGTGAACGAAGG CGAACGTGCCATTGTTTCAC
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MAWNEPGNKGQDPWGNGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSGGSISAASLIIVLVIAIVVWGLSGFYTVKEAEK GVALRFGEYIGEVDPGLQWKATFIDEVTPVNVQTVRSIPASGSMLTADENVVLVQLDVQYRVSNAKDYLYSVVDADASLR EATDSALRYVIGHNTMDDILTTGRDKIRRDTWDEIERIIKPYKLGISVVDVNFLPARPPEEVKDAFDDAIAAQEDEQRFI REAEAYSRQLEPKVRGTVQRMDQQAIAYKQRVILEAKGKVARFEQLLPEYQAAPEVTRERMYFDTMQEVMSGTNKVLIDA KNSGNLMYLPLDKLMQNSQSHKSASTNTKPAKPAMSVNSTTHTNSSIPLDGRPSRGERSLGRN
Sequences:
>Translated_383_residues MAWNEPGNKGQDPWGNGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSGGSISAASLIIVLVIAIVVWGLSGFYTVKEAEK GVALRFGEYIGEVDPGLQWKATFIDEVTPVNVQTVRSIPASGSMLTADENVVLVQLDVQYRVSNAKDYLYSVVDADASLR EATDSALRYVIGHNTMDDILTTGRDKIRRDTWDEIERIIKPYKLGISVVDVNFLPARPPEEVKDAFDDAIAAQEDEQRFI REAEAYSRQLEPKVRGTVQRMDQQAIAYKQRVILEAKGKVARFEQLLPEYQAAPEVTRERMYFDTMQEVMSGTNKVLIDA KNSGNLMYLPLDKLMQNSQSHKSASTNTKPAKPAMSVNSTTHTNSSIPLDGRPSRGERSLGRN >Mature_382_residues AWNEPGNKGQDPWGNGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSGGSISAASLIIVLVIAIVVWGLSGFYTVKEAEKG VALRFGEYIGEVDPGLQWKATFIDEVTPVNVQTVRSIPASGSMLTADENVVLVQLDVQYRVSNAKDYLYSVVDADASLRE ATDSALRYVIGHNTMDDILTTGRDKIRRDTWDEIERIIKPYKLGISVVDVNFLPARPPEEVKDAFDDAIAAQEDEQRFIR EAEAYSRQLEPKVRGTVQRMDQQAIAYKQRVILEAKGKVARFEQLLPEYQAAPEVTRERMYFDTMQEVMSGTNKVLIDAK NSGNLMYLPLDKLMQNSQSHKSASTNTKPAKPAMSVNSTTHTNSSIPLDGRPSRGERSLGRN
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=372, Percent_Identity=54.8387096774194, Blast_Score=380, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 42387; Mature: 42256
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWNEPGNKGQDPWGNGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSGGSISAASLIIVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH VIAIVVWGLSGFYTVKEAEKGVALRFGEYIGEVDPGLQWKATFIDEVTPVNVQTVRSIPA HHHHHHHCCCCCEEHHHHHCCHHHHHHHHHCCCCCCCEEEEEHHCCCCCCCHHHHHCCCC SGSMLTADENVVLVQLDVQYRVSNAKDYLYSVVDADASLREATDSALRYVIGHNTMDDIL CCCEEECCCCEEEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH TTGRDKIRRDTWDEIERIIKPYKLGISVVDVNFLPARPPEEVKDAFDDAIAAQEDEQRFI HCCHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHH REAEAYSRQLEPKVRGTVQRMDQQAIAYKQRVILEAKGKVARFEQLLPEYQAAPEVTRER HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHH MYFDTMQEVMSGTNKVLIDAKNSGNLMYLPLDKLMQNSQSHKSASTNTKPAKPAMSVNST HHHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHHCCCHHHCCCCCCCCCCCCCCCCCCC THTNSSIPLDGRPSRGERSLGRN CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AWNEPGNKGQDPWGNGNKGGNDKGPPDLDEVFRNLSKRFGGKGNGSGGSISAASLIIVL CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH VIAIVVWGLSGFYTVKEAEKGVALRFGEYIGEVDPGLQWKATFIDEVTPVNVQTVRSIPA HHHHHHHCCCCCEEHHHHHCCHHHHHHHHHCCCCCCCEEEEEHHCCCCCCCHHHHHCCCC SGSMLTADENVVLVQLDVQYRVSNAKDYLYSVVDADASLREATDSALRYVIGHNTMDDIL CCCEEECCCCEEEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHH TTGRDKIRRDTWDEIERIIKPYKLGISVVDVNFLPARPPEEVKDAFDDAIAAQEDEQRFI HCCHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHH REAEAYSRQLEPKVRGTVQRMDQQAIAYKQRVILEAKGKVARFEQLLPEYQAAPEVTRER HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHH MYFDTMQEVMSGTNKVLIDAKNSGNLMYLPLDKLMQNSQSHKSASTNTKPAKPAMSVNST HHHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHHCCCHHHCCCCCCCCCCCCCCCCCCC THTNSSIPLDGRPSRGERSLGRN CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]