Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963276

Identifier: 157963276

GI number: 157963276

Start: 4230224

End: 4230607

Strand: Reverse

Name: 157963276

Synonym: Spea_3462

Alternate gene names: NA

Gene position: 4230607-4230224 (Counterclockwise)

Preceding gene: 157963277

Following gene: 157963275

Centisome position: 81.76

GC content: 39.58

Gene sequence:

>384_bases
ATGGACACCAGAGAGCAATTATTATCTTGTGTAAGAGAGTTTGAACAAAACAGTGAATCGATCACCATAAGCAAAGTTGC
TCACAAATGTGGTTTATCGCATTCGCTCATTTACAACCGTCACCCTGACATCAAGGAGATGATCAACAACCTCAAGAAAA
AACAAAAAGAACAAGCGTTAGTTGATCAGCAAAAAGACCAAACAAAGAAGCTACTTAAACGAAACGAAAACCTTGAGCGC
AAGCTTGCTGAAGCAAAGGGGAAGGACGATAAGGAAACTATAGCCATGCTAATGGCACACATACATGAGCTTTACTCTAT
GTATGACTCTTTATTGGAGGAGCGTAACGCTTTTGCTCAACGTATTCTTGAATTGGAAAGCTAA

Upstream 100 bases:

>100_bases
TTAACAGGCTTAGAAGACAACCTTAACGCTGCTAATGAAATCATAAATAACCTTACTTCCACCACACCAATTAACGAGCA
AACAACCGTAGAGAGCTAAT

Downstream 100 bases:

>100_bases
TTAACTGCTAATTTAAGAAATAAAGCACGATGTTTTACAAGTATCACTGCCAACATCTCTGTTAGTGTTGGCTAACAATA
TAGTCTGAACGAACCCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MDTREQLLSCVREFEQNSESITISKVAHKCGLSHSLIYNRHPDIKEMINNLKKKQKEQALVDQQKDQTKKLLKRNENLER
KLAEAKGKDDKETIAMLMAHIHELYSMYDSLLEERNAFAQRILELES

Sequences:

>Translated_127_residues
MDTREQLLSCVREFEQNSESITISKVAHKCGLSHSLIYNRHPDIKEMINNLKKKQKEQALVDQQKDQTKKLLKRNENLER
KLAEAKGKDDKETIAMLMAHIHELYSMYDSLLEERNAFAQRILELES
>Mature_127_residues
MDTREQLLSCVREFEQNSESITISKVAHKCGLSHSLIYNRHPDIKEMINNLKKKQKEQALVDQQKDQTKKLLKRNENLER
KLAEAKGKDDKETIAMLMAHIHELYSMYDSLLEERNAFAQRILELES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14913; Mature: 14913

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTREQLLSCVREFEQNSESITISKVAHKCGLSHSLIYNRHPDIKEMINNLKKKQKEQAL
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
VDQQKDQTKKLLKRNENLERKLAEAKGKDDKETIAMLMAHIHELYSMYDSLLEERNAFAQ
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RILELES
HHHHHCC
>Mature Secondary Structure
MDTREQLLSCVREFEQNSESITISKVAHKCGLSHSLIYNRHPDIKEMINNLKKKQKEQAL
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
VDQQKDQTKKLLKRNENLERKLAEAKGKDDKETIAMLMAHIHELYSMYDSLLEERNAFAQ
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RILELES
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA