Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157963224

Identifier: 157963224

GI number: 157963224

Start: 4168141

End: 4169985

Strand: Reverse

Name: 157963224

Synonym: Spea_3410

Alternate gene names: NA

Gene position: 4169985-4168141 (Counterclockwise)

Preceding gene: 157963225

Following gene: 157963222

Centisome position: 80.59

GC content: 46.4

Gene sequence:

>1845_bases
ATGAAAATATTAACTCTTATTGCCAGCGTTACCGCAGCTTTGTTGCTGTCTGGTTGCAGTGATAAACCCGCTCAAATGGT
GTGTGATACCTTCAATACGTGTTTCAATTTAAGCTTGGGGCAGGCAGTGAAAGAGACACAGGCTAATTCCGAATTCAGCC
AATTAAAAGTGATTGTGGCGGTGGATTATGACGCGGGCGGCGATGTGCACACTAAGGTTCACGAGTCCAGTGGCTCTGCT
GAGTTTGATGCCATTGCTAAAGAGCAGTTGCAGCGTTCAATGGAGGCGCTACTTGTCACTATGGAGGCACTGCCCGAAGC
TGAGCGTGAAAGAGGCGATAGCATTCATATCAACTTTACCATCCAAACGGCAGACTTTCCCATAACGCCTAAGGTCGAGC
CTAAGCCCGAGCTAGTAGAGAACTTTTATGAAAATGGTCAGTTGCAGAGTCGGGGCTATAAGCTTGATGGCGATAAGGTG
GGTCATTGGCAGATATTTTTTGATGACGGCAGCTTAAGATTTGATTCTCAACATCCCAGTGGTGTGCAAAAGCAGTTTTC
TAAAGATGGCCTACTCCTAGAAGAGGGGTATTTTGAAGATGGGGTAAAGCAGGGGACGTTTAAGAACTATGACTTCGATG
GGCACTTGGACACTTTGCGCAATTACCAAGATGGCGAGTTGATAGGTGTGAATGAGCGCTATTTTAAAGATGGCGGGCTA
GAAGAAAAGACACTGTTTGATGCCAATGGTAATGGCATGCATCAGGAGTTTTGGCCTAACGGGGCACTTAAGTGGGAGAC
TGCGCTGGTTGCTCGGCAACCTACTGGCGAGCAAAAATACTTCGACGAAAATGGCGAGCTCATTGTTGAAAAGGCCCTAA
CTGAAGCTAAGGTCATGCAGCAGTCTATTATCGATAAGGATTACGACACCTATATGCGCTTCGCCTTTAGCTACATGATT
GAGTATGCGGGCGGTGAAGCTGCATTTAAAATTGGTACAGCAGCAATAATAGACAACTTGCAGCGTGATGGTATTAAGCA
GGTCTCGACGATATTCAACGGGCCGACAAAAATGTTTCTGCAAGAGGAGGAGGTGGACGAATATTACGTTTACCTGCCTA
TGGAGATCAATATGAGCACGCCTATAGGCGATGGTGTTGCAGAGACGGCTTTGATTGGGTTCTCTAAAGATATCGGCCAA
ACCTGGAAATTTGTAGAGGCTTCCATTGGGCGTGAGGAAGTGCTTGTTTTGCTACCAAACCTGCCGGATGCGCTTGTGAT
CCCGATTTTCCCAGAGCCTAGATTGATTAATGAGTCACAGACGACTTTAGCTGCTCAGCAAGCAGCGGGTGAGCAAAAAT
ATTTCGATCAAAACGGTGAGCTTATTGCCGACAAGGCGTTAGTTGCAGCTAAAGTCATGAGGCAGTCTATTATCGATAAG
GATTACGACGCTTATACGCGCTTTGCTCTTAGTGACGTTATTGATAACGCGGGTGGTGAAGCTGCATTGAAGCGTGAGAT
AGCAGCAATGATGGATAAGTTACAAAGCGAAGGTCTTAAGCTTGAGTCGACAAGATTCAAGAAACCGACAAAAATTTATA
TGCAGGAGGAGCTTGATGAATATTACGGTTACCTGCCTATGGAAATCAATATGAGCTCGCCAGTAGGCGATATAGTGGCT
GAGTCGGCTTTGATTGGGGTATCTAAAGACAGTGGCGCAAACTGGAAGTTTGTTGAGGCGTTAGGTGGCCGTGAGGGAGT
GCAATTGCTGCTGCCAAACTTGCCGGATGAACTTGAAATTCCGACCTTCCCAGGTCCTAGGTTGGTTAATGATAAGGCCG
ATTAA

Upstream 100 bases:

>100_bases
CATTGTTTGTGAACCGCTACACATAAAGCATACTGATATAACCCAAATTTAACGTTTTCATCTAGCATGCTCGCTATCTT
TTTAGTAAGCCTGTGAATTT

Downstream 100 bases:

>100_bases
CTAGCATTGGTATGATAAAAAGCGCTAGCAAAAATGGACTAGCGCTTTTTAGTTACATCATTGAAGTGACCGTTAAAACT
AATTGACTTCACGATGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 614; Mature: 614

Protein sequence:

>614_residues
MKILTLIASVTAALLLSGCSDKPAQMVCDTFNTCFNLSLGQAVKETQANSEFSQLKVIVAVDYDAGGDVHTKVHESSGSA
EFDAIAKEQLQRSMEALLVTMEALPEAERERGDSIHINFTIQTADFPITPKVEPKPELVENFYENGQLQSRGYKLDGDKV
GHWQIFFDDGSLRFDSQHPSGVQKQFSKDGLLLEEGYFEDGVKQGTFKNYDFDGHLDTLRNYQDGELIGVNERYFKDGGL
EEKTLFDANGNGMHQEFWPNGALKWETALVARQPTGEQKYFDENGELIVEKALTEAKVMQQSIIDKDYDTYMRFAFSYMI
EYAGGEAAFKIGTAAIIDNLQRDGIKQVSTIFNGPTKMFLQEEEVDEYYVYLPMEINMSTPIGDGVAETALIGFSKDIGQ
TWKFVEASIGREEVLVLLPNLPDALVIPIFPEPRLINESQTTLAAQQAAGEQKYFDQNGELIADKALVAAKVMRQSIIDK
DYDAYTRFALSDVIDNAGGEAALKREIAAMMDKLQSEGLKLESTRFKKPTKIYMQEELDEYYGYLPMEINMSSPVGDIVA
ESALIGVSKDSGANWKFVEALGGREGVQLLLPNLPDELEIPTFPGPRLVNDKAD

Sequences:

>Translated_614_residues
MKILTLIASVTAALLLSGCSDKPAQMVCDTFNTCFNLSLGQAVKETQANSEFSQLKVIVAVDYDAGGDVHTKVHESSGSA
EFDAIAKEQLQRSMEALLVTMEALPEAERERGDSIHINFTIQTADFPITPKVEPKPELVENFYENGQLQSRGYKLDGDKV
GHWQIFFDDGSLRFDSQHPSGVQKQFSKDGLLLEEGYFEDGVKQGTFKNYDFDGHLDTLRNYQDGELIGVNERYFKDGGL
EEKTLFDANGNGMHQEFWPNGALKWETALVARQPTGEQKYFDENGELIVEKALTEAKVMQQSIIDKDYDTYMRFAFSYMI
EYAGGEAAFKIGTAAIIDNLQRDGIKQVSTIFNGPTKMFLQEEEVDEYYVYLPMEINMSTPIGDGVAETALIGFSKDIGQ
TWKFVEASIGREEVLVLLPNLPDALVIPIFPEPRLINESQTTLAAQQAAGEQKYFDQNGELIADKALVAAKVMRQSIIDK
DYDAYTRFALSDVIDNAGGEAALKREIAAMMDKLQSEGLKLESTRFKKPTKIYMQEELDEYYGYLPMEINMSSPVGDIVA
ESALIGVSKDSGANWKFVEALGGREGVQLLLPNLPDELEIPTFPGPRLVNDKAD
>Mature_614_residues
MKILTLIASVTAALLLSGCSDKPAQMVCDTFNTCFNLSLGQAVKETQANSEFSQLKVIVAVDYDAGGDVHTKVHESSGSA
EFDAIAKEQLQRSMEALLVTMEALPEAERERGDSIHINFTIQTADFPITPKVEPKPELVENFYENGQLQSRGYKLDGDKV
GHWQIFFDDGSLRFDSQHPSGVQKQFSKDGLLLEEGYFEDGVKQGTFKNYDFDGHLDTLRNYQDGELIGVNERYFKDGGL
EEKTLFDANGNGMHQEFWPNGALKWETALVARQPTGEQKYFDENGELIVEKALTEAKVMQQSIIDKDYDTYMRFAFSYMI
EYAGGEAAFKIGTAAIIDNLQRDGIKQVSTIFNGPTKMFLQEEEVDEYYVYLPMEINMSTPIGDGVAETALIGFSKDIGQ
TWKFVEASIGREEVLVLLPNLPDALVIPIFPEPRLINESQTTLAAQQAAGEQKYFDQNGELIADKALVAAKVMRQSIIDK
DYDAYTRFALSDVIDNAGGEAALKREIAAMMDKLQSEGLKLESTRFKKPTKIYMQEELDEYYGYLPMEINMSSPVGDIVA
ESALIGVSKDSGANWKFVEALGGREGVQLLLPNLPDELEIPTFPGPRLVNDKAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68349; Mature: 68349

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILTLIASVTAALLLSGCSDKPAQMVCDTFNTCFNLSLGQAVKETQANSEFSQLKVIVA
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHEEEEEE
VDYDAGGDVHTKVHESSGSAEFDAIAKEQLQRSMEALLVTMEALPEAERERGDSIHINFT
EECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEEEE
IQTADFPITPKVEPKPELVENFYENGQLQSRGYKLDGDKVGHWQIFFDDGSLRFDSQHPS
EEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCEEEEEEEECCCEEECCCCCC
GVQKQFSKDGLLLEEGYFEDGVKQGTFKNYDFDGHLDTLRNYQDGELIGVNERYFKDGGL
HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCHHHHCCCCC
EEKTLFDANGNGMHQEFWPNGALKWETALVARQPTGEQKYFDENGELIVEKALTEAKVMQ
CCCEEEECCCCCCCHHHCCCCCCEEEEEEEEECCCCCCCEECCCCCEEEHHHHHHHHHHH
QSIIDKDYDTYMRFAFSYMIEYAGGEAAFKIGTAAIIDNLQRDGIKQVSTIFNGPTKMFL
HHHHCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHEEE
QEEEVDEYYVYLPMEINMSTPIGDGVAETALIGFSKDIGQTWKFVEASIGREEVLVLLPN
ECCCCCEEEEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCC
LPDALVIPIFPEPRLINESQTTLAAQQAAGEQKYFDQNGELIADKALVAAKVMRQSIIDK
CCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHCC
DYDAYTRFALSDVIDNAGGEAALKREIAAMMDKLQSEGLKLESTRFKKPTKIYMQEELDE
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHH
YYGYLPMEINMSSPVGDIVAESALIGVSKDSGANWKFVEALGGREGVQLLLPNLPDELEI
HHCCCEEEEECCCCHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCCC
PTFPGPRLVNDKAD
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKILTLIASVTAALLLSGCSDKPAQMVCDTFNTCFNLSLGQAVKETQANSEFSQLKVIVA
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHEEEEEE
VDYDAGGDVHTKVHESSGSAEFDAIAKEQLQRSMEALLVTMEALPEAERERGDSIHINFT
EECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEEEE
IQTADFPITPKVEPKPELVENFYENGQLQSRGYKLDGDKVGHWQIFFDDGSLRFDSQHPS
EEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCEEEEEEEECCCEEECCCCCC
GVQKQFSKDGLLLEEGYFEDGVKQGTFKNYDFDGHLDTLRNYQDGELIGVNERYFKDGGL
HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCHHHHCCCCC
EEKTLFDANGNGMHQEFWPNGALKWETALVARQPTGEQKYFDENGELIVEKALTEAKVMQ
CCCEEEECCCCCCCHHHCCCCCCEEEEEEEEECCCCCCCEECCCCCEEEHHHHHHHHHHH
QSIIDKDYDTYMRFAFSYMIEYAGGEAAFKIGTAAIIDNLQRDGIKQVSTIFNGPTKMFL
HHHHCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHEEE
QEEEVDEYYVYLPMEINMSTPIGDGVAETALIGFSKDIGQTWKFVEASIGREEVLVLLPN
ECCCCCEEEEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCC
LPDALVIPIFPEPRLINESQTTLAAQQAAGEQKYFDQNGELIADKALVAAKVMRQSIIDK
CCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHCC
DYDAYTRFALSDVIDNAGGEAALKREIAAMMDKLQSEGLKLESTRFKKPTKIYMQEELDE
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHH
YYGYLPMEINMSSPVGDIVAESALIGVSKDSGANWKFVEALGGREGVQLLLPNLPDELEI
HHCCCEEEEECCCCHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCCC
PTFPGPRLVNDKAD
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA