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The map label for this gene is 157963180

Identifier: 157963180

GI number: 157963180

Start: 4109473

End: 4110735

Strand: Reverse

Name: 157963180

Synonym: Spea_3365

Alternate gene names: NA

Gene position: 4110735-4109473 (Counterclockwise)

Preceding gene: 157963182

Following gene: 157963179

Centisome position: 79.44

GC content: 50.91

Gene sequence:

>1263_bases
ATGATTCAGGACACTAGCGCACAAGATGTGATAAAGCAGCAGAGTAAGGCGAGCAAAATAAAACGTCCGTTGATGTTTGG
CCTTGCGGCGTTACTTGTTTCTGGACTTGTCTGGTCGAGCATGGACAGAGACTCGATTGCCACTTCAATTAAACGCTCTG
AACTGCGTTTCGCAACCTTAGAGCGCGGTACTCTTATTCGCGATATCCCCACCACAGGCAAGATTGTTGCTGCCAATGCG
CCTGTCTTATATAGCCCGGAACAGGGCTCGGTTACCTTGATTGCTAAGCCCGGTGACAAGGTTGAGCTGGGTGAGGTGGT
GGCCACCATCGAAAGCCATAAGCTAACCAACAGTTTAAAGCAGCAGCAAGCAGTACTTGAGGGGATGAAAAGCTCGCTGG
AGCGTGCTCGTCTCGATGCTCGTCGTCAACAGCTAAAGGCGCAACAAACTTTGGATATGGCCAAGGTGGATTTAGAAGCG
GCTGATCGAGAGAGTCGCCGTGGCGACCAGTTGATAGAGTCAAAGCTAATTAGCAAAATTGATTTCGAAAAGAGTAAAGA
TGATCTGCATAAGGCCAAATTGCTATTTGCCCATGCGGGTCAAGAAGCACTGCTAATGAAAGACACCTTAACCTTCGAGC
TTAAGAACACCTCCCTAGAAGTTGACCGTCAGGCGCTGGTGGTCAAAGAGCTCGAACGCCAAGTGGCGGCACTGAATATC
ATCGCGCCCGTTGCAGGTATTATTGGTAATTGGCTTACGGAGCAAAAAGCACGTATTGGTCAGAGCCAACCCATTTTGAC
CGTTGTCGATCTCAGCGCCTTCGAGGCCGAGCTTGCAGTGCCAGAGTCTTATGCCGATGAGTTAGGCATAGGTATGGTCG
TTGAGCTGAGCTTCGGCTCGGAGAAAGTGATGGGCGAGCTGTCTTCTATCTCTCCCGAGGTGCGTAACCGTGAAGTGAGC
GCAAGGGTGCGATTTGAGCAAAATGACCGTCTGCAGCTACGCCAAAACCAGCGTTTGGCGGCGCGAGTATTACTGGAGCA
CAGGCCCGATGTGTTGATGGTTAAGCGTGGATCTTTTGTTAACAGCGGTGGCGGACAGGAGGTGTATGTGATGCATGGCG
ATATTGCCGAGCAGACCCCTATTCAGTTAGGTGCACGCAGCATGAGCCATATCGAAGTGATCCTAGGCGGCCAAGAAGGA
GATATCTGGGTGACCTCGAGCATTGAGCCATTTAATAAAGCAGCGCAAGTGATCGTTCGCTAG

Upstream 100 bases:

>100_bases
TTGCTGTTTATTAGCGTTTAATTGTTTTTGGCATAGGGCTTGTATTAATAGACCTATCGAAAGCGATAAATGCTTAGAAC
GGACACTTTAGGGAAAGCAG

Downstream 100 bases:

>100_bases
CCGAGTAAGGAAGCAGACAATGAATAAAACTATTAGCAGAGTTAATAGCAAAGTTAGTCGCAGAGTTAAGCAAATGAATA
AGCAGCAAGTCATCACCGCA

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; ABC Transporter Permease; HlyD Family Secretion Protein; Secretion Protein HlyD; Efflux Transporter Rnd Family Mfp Subunit; Efflux Transporter MFP Component RND Family; ABC Transporter Component Protein; Secretion Protein HlyD Family Protein; Efflux Transporter MFP Component RND Family Protein; Membrane-Fusion Protein; Membrane Fusion Protein; ABC Transporter Permease Protein; HlyD Family Transporter Protein

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MIQDTSAQDVIKQQSKASKIKRPLMFGLAALLVSGLVWSSMDRDSIATSIKRSELRFATLERGTLIRDIPTTGKIVAANA
PVLYSPEQGSVTLIAKPGDKVELGEVVATIESHKLTNSLKQQQAVLEGMKSSLERARLDARRQQLKAQQTLDMAKVDLEA
ADRESRRGDQLIESKLISKIDFEKSKDDLHKAKLLFAHAGQEALLMKDTLTFELKNTSLEVDRQALVVKELERQVAALNI
IAPVAGIIGNWLTEQKARIGQSQPILTVVDLSAFEAELAVPESYADELGIGMVVELSFGSEKVMGELSSISPEVRNREVS
ARVRFEQNDRLQLRQNQRLAARVLLEHRPDVLMVKRGSFVNSGGGQEVYVMHGDIAEQTPIQLGARSMSHIEVILGGQEG
DIWVTSSIEPFNKAAQVIVR

Sequences:

>Translated_420_residues
MIQDTSAQDVIKQQSKASKIKRPLMFGLAALLVSGLVWSSMDRDSIATSIKRSELRFATLERGTLIRDIPTTGKIVAANA
PVLYSPEQGSVTLIAKPGDKVELGEVVATIESHKLTNSLKQQQAVLEGMKSSLERARLDARRQQLKAQQTLDMAKVDLEA
ADRESRRGDQLIESKLISKIDFEKSKDDLHKAKLLFAHAGQEALLMKDTLTFELKNTSLEVDRQALVVKELERQVAALNI
IAPVAGIIGNWLTEQKARIGQSQPILTVVDLSAFEAELAVPESYADELGIGMVVELSFGSEKVMGELSSISPEVRNREVS
ARVRFEQNDRLQLRQNQRLAARVLLEHRPDVLMVKRGSFVNSGGGQEVYVMHGDIAEQTPIQLGARSMSHIEVILGGQEG
DIWVTSSIEPFNKAAQVIVR
>Mature_420_residues
MIQDTSAQDVIKQQSKASKIKRPLMFGLAALLVSGLVWSSMDRDSIATSIKRSELRFATLERGTLIRDIPTTGKIVAANA
PVLYSPEQGSVTLIAKPGDKVELGEVVATIESHKLTNSLKQQQAVLEGMKSSLERARLDARRQQLKAQQTLDMAKVDLEA
ADRESRRGDQLIESKLISKIDFEKSKDDLHKAKLLFAHAGQEALLMKDTLTFELKNTSLEVDRQALVVKELERQVAALNI
IAPVAGIIGNWLTEQKARIGQSQPILTVVDLSAFEAELAVPESYADELGIGMVVELSFGSEKVMGELSSISPEVRNREVS
ARVRFEQNDRLQLRQNQRLAARVLLEHRPDVLMVKRGSFVNSGGGQEVYVMHGDIAEQTPIQLGARSMSHIEVILGGQEG
DIWVTSSIEPFNKAAQVIVR

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46305; Mature: 46305

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQDTSAQDVIKQQSKASKIKRPLMFGLAALLVSGLVWSSMDRDSIATSIKRSELRFATL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEE
ERGTLIRDIPTTGKIVAANAPVLYSPEQGSVTLIAKPGDKVELGEVVATIESHKLTNSLK
CCCCEEEECCCCCEEEEECCCEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
QQQAVLEGMKSSLERARLDARRQQLKAQQTLDMAKVDLEAADRESRRGDQLIESKLISKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
DFEKSKDDLHKAKLLFAHAGQEALLMKDTLTFELKNTSLEVDRQALVVKELERQVAALNI
CCCCCHHHHHHHHHHHEECCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
IAPVAGIIGNWLTEQKARIGQSQPILTVVDLSAFEAELAVPESYADELGIGMVVELSFGS
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCCCHHHHHHCCCCEEEEEECCC
EKVMGELSSISPEVRNREVSARVRFEQNDRLQLRQNQRLAARVLLEHRPDVLMVKRGSFV
HHHHHHHHHCCHHHHCCCEEEEEEECCCCCHHHHHCHHHHHHHHHHCCCCEEEEECCCEE
NSGGGQEVYVMHGDIAEQTPIQLGARSMSHIEVILGGQEGDIWVTSSIEPFNKAAQVIVR
ECCCCCEEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MIQDTSAQDVIKQQSKASKIKRPLMFGLAALLVSGLVWSSMDRDSIATSIKRSELRFATL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEE
ERGTLIRDIPTTGKIVAANAPVLYSPEQGSVTLIAKPGDKVELGEVVATIESHKLTNSLK
CCCCEEEECCCCCEEEEECCCEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
QQQAVLEGMKSSLERARLDARRQQLKAQQTLDMAKVDLEAADRESRRGDQLIESKLISKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
DFEKSKDDLHKAKLLFAHAGQEALLMKDTLTFELKNTSLEVDRQALVVKELERQVAALNI
CCCCCHHHHHHHHHHHEECCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
IAPVAGIIGNWLTEQKARIGQSQPILTVVDLSAFEAELAVPESYADELGIGMVVELSFGS
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCCCHHHHHHCCCCEEEEEECCC
EKVMGELSSISPEVRNREVSARVRFEQNDRLQLRQNQRLAARVLLEHRPDVLMVKRGSFV
HHHHHHHHHCCHHHHCCCEEEEEEECCCCCHHHHHCHHHHHHHHHHCCCCEEEEECCCEE
NSGGGQEVYVMHGDIAEQTPIQLGARSMSHIEVILGGQEGDIWVTSSIEPFNKAAQVIVR
ECCCCCEEEEEECCCCCCCCHHHCCCCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA