| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963166
Identifier: 157963166
GI number: 157963166
Start: 4095283
End: 4095579
Strand: Reverse
Name: 157963166
Synonym: Spea_3350
Alternate gene names: NA
Gene position: 4095579-4095283 (Counterclockwise)
Preceding gene: 157963170
Following gene: 157963165
Centisome position: 79.15
GC content: 43.1
Gene sequence:
>297_bases ATGAGCCTAAACCTAACTGCCTCAAAACAGCAAAGTGCTTTTTTTAGGAAGCTCTATATTGCTTACCTAATCGATAGTGA AAGACATAACTTATTGTCACTGCATAAGCTGACTGAAATGCCTCGTCGAACCCTGCAAGATGCAATTGCTGTCTTGGGAG ACTTAACGATAGAGTGCGAGTTTGTGCAAGATGGCGAGCGCAATAATGCGGGCTTTTATCGCATCAATCATTGGGGGGCA ATTAACCGAGACTGGGTTGAGCAGCACCTTGCTGAAATAGAATCTGTTTTGAATTAG
Upstream 100 bases:
>100_bases ATTTGGCAACAGAACAGTTATCTTATCGTACGCTAGTTATTACTTGTTATTTGTTGTAAATAAAGTAGTTTATCTGAATC ATTCTAAATATAAGACCGTC
Downstream 100 bases:
>100_bases GCTTATCTTATTCCGCTTTAAATCACCTTCCTGGCTTGATTTAACACAAAATTAAGCCTTGTTCTATACCAATCAGTATA AAGATTCGGTCGCCCAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSLNLTASKQQSAFFRKLYIAYLIDSERHNLLSLHKLTEMPRRTLQDAIAVLGDLTIECEFVQDGERNNAGFYRINHWGA INRDWVEQHLAEIESVLN
Sequences:
>Translated_98_residues MSLNLTASKQQSAFFRKLYIAYLIDSERHNLLSLHKLTEMPRRTLQDAIAVLGDLTIECEFVQDGERNNAGFYRINHWGA INRDWVEQHLAEIESVLN >Mature_97_residues SLNLTASKQQSAFFRKLYIAYLIDSERHNLLSLHKLTEMPRRTLQDAIAVLGDLTIECEFVQDGERNNAGFYRINHWGAI NRDWVEQHLAEIESVLN
Specific function: Unknown
COG id: COG4519
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11389; Mature: 11258
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNLTASKQQSAFFRKLYIAYLIDSERHNLLSLHKLTEMPRRTLQDAIAVLGDLTIECE CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE FVQDGERNNAGFYRINHWGAINRDWVEQHLAEIESVLN EECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SLNLTASKQQSAFFRKLYIAYLIDSERHNLLSLHKLTEMPRRTLQDAIAVLGDLTIECE CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE FVQDGERNNAGFYRINHWGAINRDWVEQHLAEIESVLN EECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA