Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963065

Identifier: 157963065

GI number: 157963065

Start: 3984241

End: 3985596

Strand: Reverse

Name: 157963065

Synonym: Spea_3248

Alternate gene names: NA

Gene position: 3985596-3984241 (Counterclockwise)

Preceding gene: 157963067

Following gene: 157963064

Centisome position: 77.02

GC content: 50.96

Gene sequence:

>1356_bases
ATGAAAAATTGGCAAATTATTAACCGCTTTGAACAGGTGCCACAGCTACCTATCTTGGCTGAGGTCGATGTCTTGGTCGT
GGGTGGTGGTCCTGCTGGCGTTGCTGCTGCAGAAACCGCATCGGCTGCGGGCAAGAGTACTTACCTAGTTGAAAAATATG
GCTTCTGCGGCGGCGCTGCCGTAGCAGGACTGTCTGGCACAATTTGTGGCATGTATATGGCGACCGAAGATGAAGCCGCC
GGGCCAGAGCAGGTTGTTTTCGGCTTTACCGAACGTTTCCGTCAGGCATTAGCTGATAATAATGGGGTGACTGCACCACA
GCGCTATGGCAAGACATTTACCGTTACTCATGACCCTCTAGTATGGCGTGAAGTGGCGGATGATATGTTAACGGCCGCAG
GGGTGAATATCTTGTATCACACTGCTGTTACAGGCGTGATTATGGATGGCGACAGCTTCAAAGGTGTGGTGATTGAATCA
AATGCAGGCCAGAGCATTATTCTTGCAAAAATTATCATCGACGCTTCAGGTGATGCTGCCGTCATCGCGCGTGCAGGGCT
TGATACCTACTTTGGTGATGAAGGTCGCATTCAAAATCCAACCATGTTCTTCCGTATCGCGGGCGTGGATATGGAGCAGT
ATCTAGAGTACTACGGTATGGACACCATCTGCCCGCCGAAAGTGACCGAGAACATTCTAAAAGCGAATAATGAATTAGGC
TGGGAGCTACCACGTCATAAGATCTGGATCTTCCCGACCACACGTCCTGGCGAGCTGATGGTTAATGCGACTCGTTTGGC
AGGCCAAGATGGTCGTATGTTGAACGTGATTGACCCTGTTGACTTTACCGAAGCCGAAGTCTTTGGTCGTCGCCAAGTTC
GCGCCTATGCCAAGTTCCTTAATGAGTTTGTGCCTGGGTGTGACAATGCCTACGTGGTTGATACCGGTGTTGAAGTGGGG
ATTCGTCAGACGCGTTCTATCAAGGGGGTGAAGACACTGACTAATGATGATGTGGTTAACTGTCGCAAACAGCAAGATGG
TATCTGTCGTACACCTTGGCCAATTGAGTTGCACTCGGGCGATAAGCCAAAGCTGCACTGGTTACTAAATGATTACTACG
ACATTCCTTTCGCCACTCTAGTCCCTCGAGTGGGTGAAAACATCATAGTCGCGGGTCGCTGTCTCAGTGCAGAGCACGAA
GCGCTGGCGTCGGCGCGAGTCACCGCCCAATGTTTCGAATTAGGCCACGCCGCAGGCGTTGCCGCTATACAAGCTATCGA
TAGTCAAAGTCACATCCGTGACCTGAATGTTGCAGAGATCCGCGCGACCATGATTGCCAATGGTAGTGCGCTGTAA

Upstream 100 bases:

>100_bases
TATATTAGCCCCCAACAACTGATATATCAGATGAATATCACCTGCATATTAGGTGTGTATTAGCTTGGTCTGGCTCATAT
CAGCATCCTTTGGAGTAAAA

Downstream 100 bases:

>100_bases
CCCAATATAACTCGCCGCATCGATTATGCTAACAGCATAAGGCGGCATCAAGCTTGCTCCTTAAATAATAACAAAAAGGG
GCAGCGTGGAATTTACCTAT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Invasion Protein IbeA; Glucose-Inhibited Division Protein A; Fumarate Reductase/Succinate Dehydrogenase Flavoprotein; Dihydrolipoamide Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Thiamine Biosynthesis Thi4 Protein; Invasion Protein IbeA Family Protein; Protein Involved In Invasion; FAD Dependent Oxidoreductase Domain Protein; Invasion Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family; tRNA Uridine 5-Carboxymethylaminomethyl GidA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MKNWQIINRFEQVPQLPILAEVDVLVVGGGPAGVAAAETASAAGKSTYLVEKYGFCGGAAVAGLSGTICGMYMATEDEAA
GPEQVVFGFTERFRQALADNNGVTAPQRYGKTFTVTHDPLVWREVADDMLTAAGVNILYHTAVTGVIMDGDSFKGVVIES
NAGQSIILAKIIIDASGDAAVIARAGLDTYFGDEGRIQNPTMFFRIAGVDMEQYLEYYGMDTICPPKVTENILKANNELG
WELPRHKIWIFPTTRPGELMVNATRLAGQDGRMLNVIDPVDFTEAEVFGRRQVRAYAKFLNEFVPGCDNAYVVDTGVEVG
IRQTRSIKGVKTLTNDDVVNCRKQQDGICRTPWPIELHSGDKPKLHWLLNDYYDIPFATLVPRVGENIIVAGRCLSAEHE
ALASARVTAQCFELGHAAGVAAIQAIDSQSHIRDLNVAEIRATMIANGSAL

Sequences:

>Translated_451_residues
MKNWQIINRFEQVPQLPILAEVDVLVVGGGPAGVAAAETASAAGKSTYLVEKYGFCGGAAVAGLSGTICGMYMATEDEAA
GPEQVVFGFTERFRQALADNNGVTAPQRYGKTFTVTHDPLVWREVADDMLTAAGVNILYHTAVTGVIMDGDSFKGVVIES
NAGQSIILAKIIIDASGDAAVIARAGLDTYFGDEGRIQNPTMFFRIAGVDMEQYLEYYGMDTICPPKVTENILKANNELG
WELPRHKIWIFPTTRPGELMVNATRLAGQDGRMLNVIDPVDFTEAEVFGRRQVRAYAKFLNEFVPGCDNAYVVDTGVEVG
IRQTRSIKGVKTLTNDDVVNCRKQQDGICRTPWPIELHSGDKPKLHWLLNDYYDIPFATLVPRVGENIIVAGRCLSAEHE
ALASARVTAQCFELGHAAGVAAIQAIDSQSHIRDLNVAEIRATMIANGSAL
>Mature_451_residues
MKNWQIINRFEQVPQLPILAEVDVLVVGGGPAGVAAAETASAAGKSTYLVEKYGFCGGAAVAGLSGTICGMYMATEDEAA
GPEQVVFGFTERFRQALADNNGVTAPQRYGKTFTVTHDPLVWREVADDMLTAAGVNILYHTAVTGVIMDGDSFKGVVIES
NAGQSIILAKIIIDASGDAAVIARAGLDTYFGDEGRIQNPTMFFRIAGVDMEQYLEYYGMDTICPPKVTENILKANNELG
WELPRHKIWIFPTTRPGELMVNATRLAGQDGRMLNVIDPVDFTEAEVFGRRQVRAYAKFLNEFVPGCDNAYVVDTGVEVG
IRQTRSIKGVKTLTNDDVVNCRKQQDGICRTPWPIELHSGDKPKLHWLLNDYYDIPFATLVPRVGENIIVAGRCLSAEHE
ALASARVTAQCFELGHAAGVAAIQAIDSQSHIRDLNVAEIRATMIANGSAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48917; Mature: 48917

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNWQIINRFEQVPQLPILAEVDVLVVGGGPAGVAAAETASAAGKSTYLVEKYGFCGGAA
CCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHH
VAGLSGTICGMYMATEDEAAGPEQVVFGFTERFRQALADNNGVTAPQRYGKTFTVTHDPL
HHCCCCCEEEEEEECCCCCCCCHHEEHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCH
VWREVADDMLTAAGVNILYHTAVTGVIMDGDSFKGVVIESNAGQSIILAKIIIDASGDAA
HHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCEEEEECCCCCEEEEEEEEEECCCCEE
VIARAGLDTYFGDEGRIQNPTMFFRIAGVDMEQYLEYYGMDTICPPKVTENILKANNELG
EEEECCCCHHCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
WELPRHKIWIFPTTRPGELMVNATRLAGQDGRMLNVIDPVDFTEAEVFGRRQVRAYAKFL
CCCCCCEEEEEECCCCCCEEEEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
NEFVPGCDNAYVVDTGVEVGIRQTRSIKGVKTLTNDDVVNCRKQQDGICRTPWPIELHSG
HHHCCCCCCCEEEECCCEECCHHHCCCCCCEECCCCCHHHHHHHCCCCCCCCCEEEECCC
DKPKLHWLLNDYYDIPFATLVPRVGENIIVAGRCLSAEHEALASARVTAQCFELGHAAGV
CCCEEEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
AAIQAIDSQSHIRDLNVAEIRATMIANGSAL
HHHHHHCCHHHHCCCCHHHHEEEEEECCCCC
>Mature Secondary Structure
MKNWQIINRFEQVPQLPILAEVDVLVVGGGPAGVAAAETASAAGKSTYLVEKYGFCGGAA
CCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHH
VAGLSGTICGMYMATEDEAAGPEQVVFGFTERFRQALADNNGVTAPQRYGKTFTVTHDPL
HHCCCCCEEEEEEECCCCCCCCHHEEHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCH
VWREVADDMLTAAGVNILYHTAVTGVIMDGDSFKGVVIESNAGQSIILAKIIIDASGDAA
HHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCEEEEECCCCCEEEEEEEEEECCCCEE
VIARAGLDTYFGDEGRIQNPTMFFRIAGVDMEQYLEYYGMDTICPPKVTENILKANNELG
EEEECCCCHHCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
WELPRHKIWIFPTTRPGELMVNATRLAGQDGRMLNVIDPVDFTEAEVFGRRQVRAYAKFL
CCCCCCEEEEEECCCCCCEEEEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
NEFVPGCDNAYVVDTGVEVGIRQTRSIKGVKTLTNDDVVNCRKQQDGICRTPWPIELHSG
HHHCCCCCCCEEEECCCEECCHHHCCCCCCEECCCCCHHHHHHHCCCCCCCCCEEEECCC
DKPKLHWLLNDYYDIPFATLVPRVGENIIVAGRCLSAEHEALASARVTAQCFELGHAAGV
CCCEEEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
AAIQAIDSQSHIRDLNVAEIRATMIANGSAL
HHHHHHCCHHHHCCCCHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA