Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157963037

Identifier: 157963037

GI number: 157963037

Start: 3946456

End: 3948450

Strand: Reverse

Name: 157963037

Synonym: Spea_3220

Alternate gene names: NA

Gene position: 3948450-3946456 (Counterclockwise)

Preceding gene: 157963038

Following gene: 157963036

Centisome position: 76.3

GC content: 43.46

Gene sequence:

>1995_bases
ATGCTCACATTATCTGAAAAAGAGTGTATTGCGTTAATTAATAAAGGCGAGTGCTTTCAAGCTGAAGTTGAAGGCGGCTC
ATTCATCGTTAAGATTGATGAGTACTCTCCAGTTGTATGTACTGCTATTCATAATGGTCACCGCTTACGCGATGACCTTA
ACAAGTCCTTCTTGCTGACTAAAGAAGAACGCTTTTATGAAGAAGACCCGTACACAGACGAAATGCTGTCGTCATTCCCT
ATTGTCTTGATAGGTAATGACTCTCGTTTTGAATATGACTTGAACCGCCCAAAGGCGCATTCAACCTATTTCAAAACCGC
GTGGAACAAGCAAGTCTGGCAAAAGCCATTAAGCACTAAACAGCGTAGCGAAAGTCACGCTAAGCACCAGTCGTTTTATA
ACGTACTGAGTGCTTTGATTACGCGTCTAGAGAAGCAGTTTAAAAACTGCATCGTGTTCGATACGCACTCGTATAACCAT
CAGCGTATAGAAGCCGATACGCCGACGTTTAATATTGGCACCAGCCAGATTGATATCGAACGTTGGGGTGGCACACCAGG
CCATTTTGAGAAGCAACTTAATAAGATTGAGCTACCAAACCTTGCCGTGCGCGCTGCCACAGATGAAGTGTTTCAAGGTC
GCGGCTATTTAATTGCTCACGTAAACGCGCATTTCGATAACACCTTGGTGTTACCTGTCGAAGTTAAAAAAGTGTTTATG
GACGAAACCACGGGTGAGTTATACCCACTGGTTTTGGAAGAGCTAAAGGCGGGGATTAAGCAGGCGATATCTGAAACTGC
TGCATTCTTTATGCGCCGTTTTGGTAAGCGTAAATCGGTGAGAAATGTCGACTTATTGTCATCGACGTTATCGCCTGAGA
TTTTATCATTAGATAAAAGCTTATATAAGTTGGCTAACAACGTTGCCACACTGAAGTATATTAACCCGATTAATATTGCC
AGTGAGCGTAAAAAGTTTTTAGCGCGCAAAGGGGCTGTGGCACCAGAGTTTAGCTACAAGCAGCTAAACCTTAATCCATA
TCAGTTCCGCGAGCAGCTGTACAAGCTACCCGTTGAAAACGTAATGGATGCCGATATTCAGCAGCTTTATCGCCATGTGA
TTGATAACTTAGCGACTAAGATTGACCTGCTATGCTCTATCGGCAATGACGACTTTGTTTATAACTCGCTTAAATATTAC
GGTCAGCCAGATAAAGACGATATTGCTAACGCAGAGTTTTTATTGCGTGCGCCAGATATCATAGGTGATGACGAAGAGCC
GAGTTTTGATGCAAGCCATGCGGTTCAGTCATTCCAAAAGCAGGCCGATGAATGGGGCCTTAAATGTAAGGTCGAAAAGT
CATCGCGTATTGTGGCTAAAGCCATGGTCGACAGCGAAAGAAACTGTTTGTTGATCAACAAAGATGCGATGTTCACTGCT
AAAGAACTTATCGCGTTTGCTAACCATGAGTTGGGCGTGCATATGTTGACTACGGTTAACGCGCGTCGCCAAAAGTTAAG
AGTGCTGTCACTAGGGCTTGTGGGTAACACCCATACTCAAGAAGGTGTGGCGATTTACAGTGAATACTGTTCAGGTAACC
TAACTCTTAATCGCCTTAAGATCTTAGCGCTGCGCGTAATTGCAGTAAACTTGATGTTAGAGCAGCGTGATTTCTCGATG
ACCTTCCAAACGCTAATGCGTGAATATGGTCAAACAACCGAGCAAGCGTTTACGTTAACCACGCGTGTTTATCGTGGTGG
CGGTTTCACTAAAGATTTCCTTTACTTAAAGGGCTTTAGAGATATCGTTAACTTAAGTAAAACCACGCCGCTAGATAATT
TGTTAGTCGGTAAAGCTGGCATTTTGGATTTGTCGATCATTAGCGAAATGGTTGAACGTAACATGCTTGAAAAGCCGGTT
CCGTTATTTGAGCTAAAGCACAAGTCAACGCCTGAAACAGCGGTAATTGATTACTTGGTTTCAGCGATCCGTTAA

Upstream 100 bases:

>100_bases
GTTAAGCTTCAGAAAAAAGTCATTGATTTCGTTGAAAGTGTAGTCAATGCCAAAGAAGCATTAACACAGAGAAGAAGCGA
GTTTAGAAAGGCGATTGACG

Downstream 100 bases:

>100_bases
GCGCAGCGGCCACAGCGACGTTCACGAAAACGCCCTATTATTCATTTAATAGGGCGTTTTTTTATCTTGGTTTTAAGGTT
AAAGTTAACAAAGGGTCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 664; Mature: 664

Protein sequence:

>664_residues
MLTLSEKECIALINKGECFQAEVEGGSFIVKIDEYSPVVCTAIHNGHRLRDDLNKSFLLTKEERFYEEDPYTDEMLSSFP
IVLIGNDSRFEYDLNRPKAHSTYFKTAWNKQVWQKPLSTKQRSESHAKHQSFYNVLSALITRLEKQFKNCIVFDTHSYNH
QRIEADTPTFNIGTSQIDIERWGGTPGHFEKQLNKIELPNLAVRAATDEVFQGRGYLIAHVNAHFDNTLVLPVEVKKVFM
DETTGELYPLVLEELKAGIKQAISETAAFFMRRFGKRKSVRNVDLLSSTLSPEILSLDKSLYKLANNVATLKYINPINIA
SERKKFLARKGAVAPEFSYKQLNLNPYQFREQLYKLPVENVMDADIQQLYRHVIDNLATKIDLLCSIGNDDFVYNSLKYY
GQPDKDDIANAEFLLRAPDIIGDDEEPSFDASHAVQSFQKQADEWGLKCKVEKSSRIVAKAMVDSERNCLLINKDAMFTA
KELIAFANHELGVHMLTTVNARRQKLRVLSLGLVGNTHTQEGVAIYSEYCSGNLTLNRLKILALRVIAVNLMLEQRDFSM
TFQTLMREYGQTTEQAFTLTTRVYRGGGFTKDFLYLKGFRDIVNLSKTTPLDNLLVGKAGILDLSIISEMVERNMLEKPV
PLFELKHKSTPETAVIDYLVSAIR

Sequences:

>Translated_664_residues
MLTLSEKECIALINKGECFQAEVEGGSFIVKIDEYSPVVCTAIHNGHRLRDDLNKSFLLTKEERFYEEDPYTDEMLSSFP
IVLIGNDSRFEYDLNRPKAHSTYFKTAWNKQVWQKPLSTKQRSESHAKHQSFYNVLSALITRLEKQFKNCIVFDTHSYNH
QRIEADTPTFNIGTSQIDIERWGGTPGHFEKQLNKIELPNLAVRAATDEVFQGRGYLIAHVNAHFDNTLVLPVEVKKVFM
DETTGELYPLVLEELKAGIKQAISETAAFFMRRFGKRKSVRNVDLLSSTLSPEILSLDKSLYKLANNVATLKYINPINIA
SERKKFLARKGAVAPEFSYKQLNLNPYQFREQLYKLPVENVMDADIQQLYRHVIDNLATKIDLLCSIGNDDFVYNSLKYY
GQPDKDDIANAEFLLRAPDIIGDDEEPSFDASHAVQSFQKQADEWGLKCKVEKSSRIVAKAMVDSERNCLLINKDAMFTA
KELIAFANHELGVHMLTTVNARRQKLRVLSLGLVGNTHTQEGVAIYSEYCSGNLTLNRLKILALRVIAVNLMLEQRDFSM
TFQTLMREYGQTTEQAFTLTTRVYRGGGFTKDFLYLKGFRDIVNLSKTTPLDNLLVGKAGILDLSIISEMVERNMLEKPV
PLFELKHKSTPETAVIDYLVSAIR
>Mature_664_residues
MLTLSEKECIALINKGECFQAEVEGGSFIVKIDEYSPVVCTAIHNGHRLRDDLNKSFLLTKEERFYEEDPYTDEMLSSFP
IVLIGNDSRFEYDLNRPKAHSTYFKTAWNKQVWQKPLSTKQRSESHAKHQSFYNVLSALITRLEKQFKNCIVFDTHSYNH
QRIEADTPTFNIGTSQIDIERWGGTPGHFEKQLNKIELPNLAVRAATDEVFQGRGYLIAHVNAHFDNTLVLPVEVKKVFM
DETTGELYPLVLEELKAGIKQAISETAAFFMRRFGKRKSVRNVDLLSSTLSPEILSLDKSLYKLANNVATLKYINPINIA
SERKKFLARKGAVAPEFSYKQLNLNPYQFREQLYKLPVENVMDADIQQLYRHVIDNLATKIDLLCSIGNDDFVYNSLKYY
GQPDKDDIANAEFLLRAPDIIGDDEEPSFDASHAVQSFQKQADEWGLKCKVEKSSRIVAKAMVDSERNCLLINKDAMFTA
KELIAFANHELGVHMLTTVNARRQKLRVLSLGLVGNTHTQEGVAIYSEYCSGNLTLNRLKILALRVIAVNLMLEQRDFSM
TFQTLMREYGQTTEQAFTLTTRVYRGGGFTKDFLYLKGFRDIVNLSKTTPLDNLLVGKAGILDLSIISEMVERNMLEKPV
PLFELKHKSTPETAVIDYLVSAIR

Specific function: Unknown

COG id: COG3930

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75675; Mature: 75675

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLSEKECIALINKGECFQAEVEGGSFIVKIDEYSPVVCTAIHNGHRLRDDLNKSFLLT
CCCCCCCHHHEEECCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCHHHHHCCCCEEEE
KEERFYEEDPYTDEMLSSFPIVLIGNDSRFEYDLNRPKAHSTYFKTAWNKQVWQKPLSTK
CHHHHCCCCCCHHHHHHHCCEEEEECCCEEEEECCCCCCCCHHHHHHHCHHHHHHHHHHH
QRSESHAKHQSFYNVLSALITRLEKQFKNCIVFDTHSYNHQRIEADTPTFNIGTSQIDIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEECCCCEEECCCCEEEEE
RWGGTPGHFEKQLNKIELPNLAVRAATDEVFQGRGYLIAHVNAHFDNTLVLPVEVKKVFM
ECCCCCCHHHHHHCCCCCCCEEEEHHHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHHHH
DETTGELYPLVLEELKAGIKQAISETAAFFMRRFGKRKSVRNVDLLSSTLSPEILSLDKS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHH
LYKLANNVATLKYINPINIASERKKFLARKGAVAPEFSYKQLNLNPYQFREQLYKLPVEN
HHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHCCHHH
VMDADIQQLYRHVIDNLATKIDLLCSIGNDDFVYNSLKYYGQPDKDDIANAEFLLRAPDI
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEHHHHHCCCCCCCCCCCCEEEEECCCC
IGDDEEPSFDASHAVQSFQKQADEWGLKCKVEKSSRIVAKAMVDSERNCLLINKDAMFTA
CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEECCCHHHH
KELIAFANHELGVHMLTTVNARRQKLRVLSLGLVGNTHTQEGVAIYSEYCSGNLTLNRLK
HHHHHHHCCCCCEEEEEECHHHHHHEEEEEEEEECCCCCCCCHHHHHHHCCCCCCHHHHH
ILALRVIAVNLMLEQRDFSMTFQTLMREYGQTTEQAFTLTTRVYRGGGFTKDFLYLKGFR
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCHHHHHHHHHH
DIVNLSKTTPLDNLLVGKAGILDLSIISEMVERNMLEKPVPLFELKHKSTPETAVIDYLV
HHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHH
SAIR
HHCC
>Mature Secondary Structure
MLTLSEKECIALINKGECFQAEVEGGSFIVKIDEYSPVVCTAIHNGHRLRDDLNKSFLLT
CCCCCCCHHHEEECCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCHHHHHCCCCEEEE
KEERFYEEDPYTDEMLSSFPIVLIGNDSRFEYDLNRPKAHSTYFKTAWNKQVWQKPLSTK
CHHHHCCCCCCHHHHHHHCCEEEEECCCEEEEECCCCCCCCHHHHHHHCHHHHHHHHHHH
QRSESHAKHQSFYNVLSALITRLEKQFKNCIVFDTHSYNHQRIEADTPTFNIGTSQIDIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEECCCCEEECCCCEEEEE
RWGGTPGHFEKQLNKIELPNLAVRAATDEVFQGRGYLIAHVNAHFDNTLVLPVEVKKVFM
ECCCCCCHHHHHHCCCCCCCEEEEHHHHHHHCCCCEEEEEEECCCCCEEEEEHHHHHHHH
DETTGELYPLVLEELKAGIKQAISETAAFFMRRFGKRKSVRNVDLLSSTLSPEILSLDKS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHH
LYKLANNVATLKYINPINIASERKKFLARKGAVAPEFSYKQLNLNPYQFREQLYKLPVEN
HHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHCCHHH
VMDADIQQLYRHVIDNLATKIDLLCSIGNDDFVYNSLKYYGQPDKDDIANAEFLLRAPDI
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEHHHHHCCCCCCCCCCCCEEEEECCCC
IGDDEEPSFDASHAVQSFQKQADEWGLKCKVEKSSRIVAKAMVDSERNCLLINKDAMFTA
CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEECCCHHHH
KELIAFANHELGVHMLTTVNARRQKLRVLSLGLVGNTHTQEGVAIYSEYCSGNLTLNRLK
HHHHHHHCCCCCEEEEEECHHHHHHEEEEEEEEECCCCCCCCHHHHHHHCCCCCCHHHHH
ILALRVIAVNLMLEQRDFSMTFQTLMREYGQTTEQAFTLTTRVYRGGGFTKDFLYLKGFR
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCHHHHHHHHHH
DIVNLSKTTPLDNLLVGKAGILDLSIISEMVERNMLEKPVPLFELKHKSTPETAVIDYLV
HHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHH
SAIR
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA