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The map label for this gene is yliI [C]

Identifier: 157963036

GI number: 157963036

Start: 3944934

End: 3946013

Strand: Reverse

Name: yliI [C]

Synonym: Spea_3219

Alternate gene names: 157963036

Gene position: 3946013-3944934 (Counterclockwise)

Preceding gene: 157963037

Following gene: 157963034

Centisome position: 76.26

GC content: 46.2

Gene sequence:

>1080_bases
ATGAAATCAGCAATTAGCAAAACAGGATTGTTACTGCTAGTCGCAGTATCGAGTTATTCGCAAGCCTATGAGGCAGTGAA
AGTTGCCAGTGGGCTAAATATTCCTTGGGGTATGGCCTATGTTGACGCCCAAACCATGCTGGTGACGGAAAGACAAGGCG
TGATAAAGCGCTTAAACCTTAAAACGGGTAAGCATCAAACACTGTTCACGCCAGAAGGAGTATGGGCTGAGGGCCAAGGC
GGTCTGCTCGATGTTGCACTTTCGCCTTTCGAAGCGAGTAAAATTTACTTAACTTATAGCAAAGATATTGGGGAGGAGGG
CGCCACAACCCTTGCTCAAGCGACATATAAGAGCGGCAAGCTTACTGAATGGCAAGATCTGTTTATTTCAACATCCCGCT
CAGATACTGGAAGGCATTTTGGCAGTCGTATCGCCTTCGATAATAACAGTCTCTATTTCTCCATTGGTGATCGCGGTGTA
CGCGAAAATGGTCAGGATACCCTGACACATGCTGGTTCAATATTACGTTTAAATCCAGATGGCAGCCCACCAAGCGATAA
TCCTTTTATTAATAACCAAGGCGTTCTTGCTGAGATCTGGAGTTACGGCCATCGCAACCCTCAGGGCTTAATCTTTGATC
CTCACAGCCAGAAGCTATGGTCTATAGAGCATGGCCCCCGAGGCGGTGATGAAATCAATCTCATAAAAAAAGGCGCTAAT
TATGGCTGGCCAATCACTTCTCACGGTAAAGAGTATTGGGGGCCAATTAGTGTCGGTGAAGGTAAACTAAAAGAGGGCGT
AGAACCACCGGTTAAGGTCTATGTTCCGTCTATCGCACCGGGCAGCTTAGTCATGTATCGCGGTGATAAGTTCCCCGAGC
TAGATGGCAAGCTACTGGCTGGTGCATTAAAGCTGACCCACATTAATGTGGTGACTATCGATGACGCAGGTAAAGCGGTT
GCCGAGCAGCGAATAATGTCAGAACTTGGTGAACGAATAAGAGATATTGAAGTGTCGCCTAAAGGAGACATCTATTTCAG
TACCGATAGCGGCAATATCTATAAGCTTAAAAGATTTTAA

Upstream 100 bases:

>100_bases
TAGAACCTAGGCTCTGCTTTAAAGCCCGTCCTAGCACCTATATAAGCGTAGCGCTTGAGAACCTCATTACAAATTCATTA
ATAAGGACGAGGGTATGTCG

Downstream 100 bases:

>100_bases
AGAAGGTTCTAGGTTTAAGAGAAGGTCCTAGGTTCGAGGAAAAGCTAAGACGGTTAAAAGCAGGAAGAGCTAAGAAGGTA
AGAGCCGAACGGCCTGCGGC

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKSAISKTGLLLLVAVSSYSQAYEAVKVASGLNIPWGMAYVDAQTMLVTERQGVIKRLNLKTGKHQTLFTPEGVWAEGQG
GLLDVALSPFEASKIYLTYSKDIGEEGATTLAQATYKSGKLTEWQDLFISTSRSDTGRHFGSRIAFDNNSLYFSIGDRGV
RENGQDTLTHAGSILRLNPDGSPPSDNPFINNQGVLAEIWSYGHRNPQGLIFDPHSQKLWSIEHGPRGGDEINLIKKGAN
YGWPITSHGKEYWGPISVGEGKLKEGVEPPVKVYVPSIAPGSLVMYRGDKFPELDGKLLAGALKLTHINVVTIDDAGKAV
AEQRIMSELGERIRDIEVSPKGDIYFSTDSGNIYKLKRF

Sequences:

>Translated_359_residues
MKSAISKTGLLLLVAVSSYSQAYEAVKVASGLNIPWGMAYVDAQTMLVTERQGVIKRLNLKTGKHQTLFTPEGVWAEGQG
GLLDVALSPFEASKIYLTYSKDIGEEGATTLAQATYKSGKLTEWQDLFISTSRSDTGRHFGSRIAFDNNSLYFSIGDRGV
RENGQDTLTHAGSILRLNPDGSPPSDNPFINNQGVLAEIWSYGHRNPQGLIFDPHSQKLWSIEHGPRGGDEINLIKKGAN
YGWPITSHGKEYWGPISVGEGKLKEGVEPPVKVYVPSIAPGSLVMYRGDKFPELDGKLLAGALKLTHINVVTIDDAGKAV
AEQRIMSELGERIRDIEVSPKGDIYFSTDSGNIYKLKRF
>Mature_359_residues
MKSAISKTGLLLLVAVSSYSQAYEAVKVASGLNIPWGMAYVDAQTMLVTERQGVIKRLNLKTGKHQTLFTPEGVWAEGQG
GLLDVALSPFEASKIYLTYSKDIGEEGATTLAQATYKSGKLTEWQDLFISTSRSDTGRHFGSRIAFDNNSLYFSIGDRGV
RENGQDTLTHAGSILRLNPDGSPPSDNPFINNQGVLAEIWSYGHRNPQGLIFDPHSQKLWSIEHGPRGGDEINLIKKGAN
YGWPITSHGKEYWGPISVGEGKLKEGVEPPVKVYVPSIAPGSLVMYRGDKFPELDGKLLAGALKLTHINVVTIDDAGKAV
AEQRIMSELGERIRDIEVSPKGDIYFSTDSGNIYKLKRF

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Escherichia coli, GI1787060, Length=362, Percent_Identity=38.121546961326, Blast_Score=228, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 39274; Mature: 39274

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAISKTGLLLLVAVSSYSQAYEAVKVASGLNIPWGMAYVDAQTMLVTERQGVIKRLNL
CCCCHHHCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEECHHHHHHEECC
KTGKHQTLFTPEGVWAEGQGGLLDVALSPFEASKIYLTYSKDIGEEGATTLAQATYKSGK
CCCCCCEEECCCCCEECCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCC
LTEWQDLFISTSRSDTGRHFGSRIAFDNNSLYFSIGDRGVRENGQDTLTHAGSILRLNPD
CCCHHHEEEECCCCCCCHHCCCEEEECCCEEEEEECCCCCCCCCCHHHHCCCCEEEECCC
GSPPSDNPFINNQGVLAEIWSYGHRNPQGLIFDPHSQKLWSIEHGPRGGDEINLIKKGAN
CCCCCCCCEECCCCHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEEEECCC
YGWPITSHGKEYWGPISVGEGKLKEGVEPPVKVYVPSIAPGSLVMYRGDKFPELDGKLLA
CCCCCCCCCHHHCCCCCCCCCHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCCHHHE
GALKLTHINVVTIDDAGKAVAEQRIMSELGERIRDIEVSPKGDIYFSTDSGNIYKLKRF
EEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCEEEEECC
>Mature Secondary Structure
MKSAISKTGLLLLVAVSSYSQAYEAVKVASGLNIPWGMAYVDAQTMLVTERQGVIKRLNL
CCCCHHHCCEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEECHHHHHHEECC
KTGKHQTLFTPEGVWAEGQGGLLDVALSPFEASKIYLTYSKDIGEEGATTLAQATYKSGK
CCCCCCEEECCCCCEECCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCC
LTEWQDLFISTSRSDTGRHFGSRIAFDNNSLYFSIGDRGVRENGQDTLTHAGSILRLNPD
CCCHHHEEEECCCCCCCHHCCCEEEECCCEEEEEECCCCCCCCCCHHHHCCCCEEEECCC
GSPPSDNPFINNQGVLAEIWSYGHRNPQGLIFDPHSQKLWSIEHGPRGGDEINLIKKGAN
CCCCCCCCEECCCCHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEEEECCC
YGWPITSHGKEYWGPISVGEGKLKEGVEPPVKVYVPSIAPGSLVMYRGDKFPELDGKLLA
CCCCCCCCCHHHCCCCCCCCCHHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCCHHHE
GALKLTHINVVTIDDAGKAVAEQRIMSELGERIRDIEVSPKGDIYFSTDSGNIYKLKRF
EEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]