Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963018

Identifier: 157963018

GI number: 157963018

Start: 3924231

End: 3924626

Strand: Reverse

Name: 157963018

Synonym: Spea_3201

Alternate gene names: NA

Gene position: 3924626-3924231 (Counterclockwise)

Preceding gene: 157963019

Following gene: 157963017

Centisome position: 75.84

GC content: 47.73

Gene sequence:

>396_bases
ATGGTTTTTGCCATATTAGTCTTATTTTGCTTGGCGCAAAATAGTGGCGTATTGCAGATTTTCGAGCAGCTAAATGTCAG
CTCACCTACCTATGCGAGCATAAGTGCGGCTGAACTCACCAGCGAGGCAAGCAATAGTGCCACAAGCATTGGTGAGGCCA
ATATTAGCGGGCTGAGTGTTAGCCAAGCTAAAGATTCAGAGTTTAAGCAGTGTGAGTTATCCGAAAAGTCGTTAAGAGTG
TGCCTCGACGAGCCACCTATTATGCCGTTATTGGTGTTGCTGTTTATCTTTCCGCTTATCCCAATTGCCTCACGTGTGCT
ACAAGGGGCGCTGAATGTCCCCGTACTGCCAAGGCCTAGGCGTATCCACCTTTCTCTGTGCCGCTTCCAAGAATAA

Upstream 100 bases:

>100_bases
CACAATTACGATAGTGGTTGTCAGCCTCTATTTTGACGATGAACCGGAGTCATTTATCTCGCATTTGCGCTTTAGTAAAA
CAAACAAGTATTGGACTGTT

Downstream 100 bases:

>100_bases
AAACAACTGCACTAGCTTTTATACTGATAGGTATTAATAGCTAGTACCCAGCTACTTGAATTTGCTTGTTTTAGGCCAAT
TGGTATTAGGCTGTTATATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MVFAILVLFCLAQNSGVLQIFEQLNVSSPTYASISAAELTSEASNSATSIGEANISGLSVSQAKDSEFKQCELSEKSLRV
CLDEPPIMPLLVLLFIFPLIPIASRVLQGALNVPVLPRPRRIHLSLCRFQE

Sequences:

>Translated_131_residues
MVFAILVLFCLAQNSGVLQIFEQLNVSSPTYASISAAELTSEASNSATSIGEANISGLSVSQAKDSEFKQCELSEKSLRV
CLDEPPIMPLLVLLFIFPLIPIASRVLQGALNVPVLPRPRRIHLSLCRFQE
>Mature_131_residues
MVFAILVLFCLAQNSGVLQIFEQLNVSSPTYASISAAELTSEASNSATSIGEANISGLSVSQAKDSEFKQCELSEKSLRV
CLDEPPIMPLLVLLFIFPLIPIASRVLQGALNVPVLPRPRRIHLSLCRFQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14259; Mature: 14259

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFAILVLFCLAQNSGVLQIFEQLNVSSPTYASISAAELTSEASNSATSIGEANISGLSV
CHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SQAKDSEFKQCELSEKSLRVCLDEPPIMPLLVLLFIFPLIPIASRVLQGALNVPVLPRPR
CCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RIHLSLCRFQE
CHHHHHHCCCC
>Mature Secondary Structure
MVFAILVLFCLAQNSGVLQIFEQLNVSSPTYASISAAELTSEASNSATSIGEANISGLSV
CHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SQAKDSEFKQCELSEKSLRVCLDEPPIMPLLVLLFIFPLIPIASRVLQGALNVPVLPRPR
CCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RIHLSLCRFQE
CHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA