| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963016
Identifier: 157963016
GI number: 157963016
Start: 3921090
End: 3921824
Strand: Reverse
Name: 157963016
Synonym: Spea_3199
Alternate gene names: NA
Gene position: 3921824-3921090 (Counterclockwise)
Preceding gene: 157963017
Following gene: 157963015
Centisome position: 75.79
GC content: 43.13
Gene sequence:
>735_bases ATGAAGACTCATAAAACACACAATTATCTAGGCCCTAAGCAGCCAATTTTTAAAAGTAAGTTTCAAGCAGGACTCTTTAT ATCGACCATAGCCGCATTTGCGTTTTATTGTGCGATGTTGATCATCAGTCAAAATGTGAAAGCTGAAGGCTCAAGGGTTA ACCCTATGTGGGTGAGTGCGCCAACTATGAAGGAGATGATAAATGCCAATCGCTCAGCTCTGTTTCATCAAGCCGACGAC CCGTGGAAAGGTGCAGAAACGCCACAAATCACCATGGTTTACTTTACCGACTTTAACTGCCCCTACTGCAAGAAACTGGA GCCTGAGTTAGATAAGCTTATGGCTGAATATCCACAGCTTAAAGTCATAGTAAAAATGGTACCATTACAGGGACAAAGCT CTGTTGAGGCGGTCGATTTTGCACAAAGGGTTTGGATGAATGAGCCTGATAAGTATTTAAAATTAAAAGAGATGTTAATG GCGTCACCACGTCGTTTAGATAGTCAAACAATAGCTAAAGTCGCAGCGATGACAAATACCAGTCAATGGTTGAGTCAGGC TGACGCAAGCATATCTCCAGCGATTTCAGATAACCTTGAATTAATGAGGGGATTAAGATTAGGTGGCACACCGAGTATGG TGATTGGAGAGAACATTATTGTGGGCTTGGTGCCATTTTCACAGCTAAAGCAGCAAGTCGAGCAGGCATTGGAGGCACAA GATGAGCACGGATAG
Upstream 100 bases:
>100_bases GAAGCTAATAGCGCCAAATGTAAGTGTTAAAGAAATAGTTAAGAGCGCTGCTATTGGCAGCGCTAAGAGAACATTTTAAG AGAAAGCCTAAGTGAAAAGA
Downstream 100 bases:
>100_bases CCAAAGGCCTGATAAGCCGAATTCGAGAGACAAAATTGCAGTTAAGCATCAATCTTTTGGACGAAGGTTATTTGGTTGGC TCAAGCAACTGTTGTTTATG
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; DsbA Oxidoreductase; Suppressor For Copper-Sensitivity C; Thioredoxin Domain Protein; Secreted Protein Suppressor For Copper-Sensitivity ScsC; Secreted Protein Suppressor For Copper-Sensitivity C; Metal Resistance Protein; DSBA-Like Thioredoxin Domain Protein; Disulfide Oxidoreductase; Protein-Disulfide Isomerase; ThiolDisulfide Oxidoreductase; DSBA-Like Thioredoxin Domain-Containing Protein; Thioredoxin Domain-Containing Protein; 27kDa Outer Membrane Protein; 27 KDa Outer Membrane Protein; Copper-Sensitivity Suppressor C Protein; Copper Sensitivity Protein ScsC; Secreted Copper-Sensitivity Suppressor C
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MKTHKTHNYLGPKQPIFKSKFQAGLFISTIAAFAFYCAMLIISQNVKAEGSRVNPMWVSAPTMKEMINANRSALFHQADD PWKGAETPQITMVYFTDFNCPYCKKLEPELDKLMAEYPQLKVIVKMVPLQGQSSVEAVDFAQRVWMNEPDKYLKLKEMLM ASPRRLDSQTIAKVAAMTNTSQWLSQADASISPAISDNLELMRGLRLGGTPSMVIGENIIVGLVPFSQLKQQVEQALEAQ DEHG
Sequences:
>Translated_244_residues MKTHKTHNYLGPKQPIFKSKFQAGLFISTIAAFAFYCAMLIISQNVKAEGSRVNPMWVSAPTMKEMINANRSALFHQADD PWKGAETPQITMVYFTDFNCPYCKKLEPELDKLMAEYPQLKVIVKMVPLQGQSSVEAVDFAQRVWMNEPDKYLKLKEMLM ASPRRLDSQTIAKVAAMTNTSQWLSQADASISPAISDNLELMRGLRLGGTPSMVIGENIIVGLVPFSQLKQQVEQALEAQ DEHG >Mature_244_residues MKTHKTHNYLGPKQPIFKSKFQAGLFISTIAAFAFYCAMLIISQNVKAEGSRVNPMWVSAPTMKEMINANRSALFHQADD PWKGAETPQITMVYFTDFNCPYCKKLEPELDKLMAEYPQLKVIVKMVPLQGQSSVEAVDFAQRVWMNEPDKYLKLKEMLM ASPRRLDSQTIAKVAAMTNTSQWLSQADASISPAISDNLELMRGLRLGGTPSMVIGENIIVGLVPFSQLKQQVEQALEAQ DEHG
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27346; Mature: 27346
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTHKTHNYLGPKQPIFKSKFQAGLFISTIAAFAFYCAMLIISQNVKAEGSRVNPMWVSA CCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC PTMKEMINANRSALFHQADDPWKGAETPQITMVYFTDFNCPYCKKLEPELDKLMAEYPQL HHHHHHHCCCHHHEECCCCCCCCCCCCCEEEEEEEECCCCCCHHCCCHHHHHHHHHCCHH KVIVKMVPLQGQSSVEAVDFAQRVWMNEPDKYLKLKEMLMASPRRLDSQTIAKVAAMTNT EEHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCH SQWLSQADASISPAISDNLELMRGLRLGGTPSMVIGENIIVGLVPFSQLKQQVEQALEAQ HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHH DEHG CCCC >Mature Secondary Structure MKTHKTHNYLGPKQPIFKSKFQAGLFISTIAAFAFYCAMLIISQNVKAEGSRVNPMWVSA CCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC PTMKEMINANRSALFHQADDPWKGAETPQITMVYFTDFNCPYCKKLEPELDKLMAEYPQL HHHHHHHCCCHHHEECCCCCCCCCCCCCEEEEEEEECCCCCCHHCCCHHHHHHHHHCCHH KVIVKMVPLQGQSSVEAVDFAQRVWMNEPDKYLKLKEMLMASPRRLDSQTIAKVAAMTNT EEHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCH SQWLSQADASISPAISDNLELMRGLRLGGTPSMVIGENIIVGLVPFSQLKQQVEQALEAQ HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHH DEHG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA