| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962980
Identifier: 157962980
GI number: 157962980
Start: 3873495
End: 3873821
Strand: Reverse
Name: 157962980
Synonym: Spea_3163
Alternate gene names: NA
Gene position: 3873821-3873495 (Counterclockwise)
Preceding gene: 157962981
Following gene: 157962977
Centisome position: 74.86
GC content: 40.98
Gene sequence:
>327_bases ATGAAAAAAAAATTAGCCTTTATCGCATTAGTTTCACTGAGTGTGATTGGCTGTTCTTCAAGTTCTGATTATGAAGAAAA GCAGGTGTCAGCGCCTTATATTGGTGAAGGCAATAAAGAGTATGAGAGCCTCTACCACTACGGTTATTACCGCGGCTGTA AAAATGCTTATGTTACAGCGAAAAAGCAGACAGAGTTATATGACTCAATAAAGAAAGATACAGCATTGGATGGTCTACAA CGCTTTGATGATGGCTGGGCGGCGGGGCAAAAAGCCTGTGAAGATGGTGTTCCACGTTCAATGTACAATCTACAAGCTAC CAAGTAA
Upstream 100 bases:
>100_bases ATTGGTAATATTTGAGTAATGGATGATACTCAAGGTATGTATTGAAATTAAGTAGTTAAATTAAGCATTCAAAATTGATA TGGACAAGGAGCAGAGCATA
Downstream 100 bases:
>100_bases CTGCGTCTCTTGCTGATGAAACAGACTCCGTAGAGTCTGTTTTTTAATATTTAAAGGGATATAGCTTTAGTATCATTTTT TGCTAAAGACTAATCCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MKKKLAFIALVSLSVIGCSSSSDYEEKQVSAPYIGEGNKEYESLYHYGYYRGCKNAYVTAKKQTELYDSIKKDTALDGLQ RFDDGWAAGQKACEDGVPRSMYNLQATK
Sequences:
>Translated_108_residues MKKKLAFIALVSLSVIGCSSSSDYEEKQVSAPYIGEGNKEYESLYHYGYYRGCKNAYVTAKKQTELYDSIKKDTALDGLQ RFDDGWAAGQKACEDGVPRSMYNLQATK >Mature_108_residues MKKKLAFIALVSLSVIGCSSSSDYEEKQVSAPYIGEGNKEYESLYHYGYYRGCKNAYVTAKKQTELYDSIKKDTALDGLQ RFDDGWAAGQKACEDGVPRSMYNLQATK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12086; Mature: 12086
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKLAFIALVSLSVIGCSSSSDYEEKQVSAPYIGEGNKEYESLYHYGYYRGCKNAYVTA CCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEC KKQTELYDSIKKDTALDGLQRFDDGWAAGQKACEDGVPRSMYNLQATK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHCCCCCC >Mature Secondary Structure MKKKLAFIALVSLSVIGCSSSSDYEEKQVSAPYIGEGNKEYESLYHYGYYRGCKNAYVTA CCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEC KKQTELYDSIKKDTALDGLQRFDDGWAAGQKACEDGVPRSMYNLQATK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA