| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is purP [H]
Identifier: 157962904
GI number: 157962904
Start: 3785671
End: 3786960
Strand: Reverse
Name: purP [H]
Synonym: Spea_3086
Alternate gene names: 157962904
Gene position: 3786960-3785671 (Counterclockwise)
Preceding gene: 157962905
Following gene: 157962903
Centisome position: 73.18
GC content: 48.06
Gene sequence:
>1290_bases ATGTTAGAAAAATTATTCAAATTAAAACAAAATCAAACAACGCTAAAGCAAGAAGTTATCGCAGGACTAACGACCTTCTT GACCATGGCTTACATTATTTTCGTGAACCCTATGATGCTGGCCGATGCGGGCATGGATCATGGCGCCGTTTTTGTCGCAA CTTGCTTAGCTGCCGCCATCGGTTGTTTAGTCATGGGCTTAGTGGCTAACTACCCGATTGCGCTGGCACCCGGTATGGGG CTCAACGCCTTCTTTACTTACACGGTAGTAGGTGAGATGGGTTACTCGTGGGAGACGGCTTTAGGCGCCGTATTCCTGTC TGGGATCTGCTTCTTAGTACTGTCTTTAGTGCGAATTCGCGAGTGGATTGTTAATAGCATTCCCATGTCGCTTCGTATCG GCATTGCCGCTGGTATCGGTTTGTTCTTGGCCTTATTAGGCCTTAAAAGTGCCGGTATTGTGGTTTCTAGCCCTGCGACA TTGGTGACCATGGGTGATATCACTTCCTTTCCAGCCGTTATGGCGGCATTAGGTTTCTTCCTGATTATCGCCATGGTGCA TCACGGGATGAAGTCTGCGGTGGTGATTAGCATTCTGGCCATTACCTTACTGGGCTTACTGTTTGGCGATGTGCAGTATC AAGGTATTGTTTCTGCGCCGCCTTCAATCATGCCGACATTTATGAAAATGGACCTGTCTGGCGTGCTTGAAGTCAGCATG CTATCTGTGGTGTTTGCATTTTTGTTTGTCGATTTGTTTGATACCTCGGGTACCTTAGTTGCAGTCGCTCAGCGTGGTGG CTTCTTAGATGATAAAGGCCGTTTACCCCGCTTAAATCGTGCGTTAACGGCTGACAGCACCGCGACTATCGCCGGTGCTA TGCTGGGTACGTCAACTACGACCAGTTATGTTGAAAGTACCGCTGGCGTCAGTGCCGGTGGCCGCACAGGTTTAACTGCC GTAGTTGTGGGAGTACTGTTTTTAGGTGCGTTATTTATCTCGCCATTAGCCGGCATGGTACCTGCGTACGCAACGGCGGG TACACTTTTTTACGTGGCTATTCTTATGATGTCTGGCCTAGTGCATGTTGAATGGGAAGATATTACCGAAGCCGCTCCTG TTGTGGTTGTATGCATATTGATGCCGCTGACCTTCTCGATTGCAACGGGGATCGCCATGGGCTTTATCTCTTATGCGCTG ATCAAGTTAATGAGTGGCCGCTACAAAGATTTAAGCCTAGGTGTGCTGATCTTAGCCGCATTGTTTATTGCTAAATTTAT CTATGGTTAA
Upstream 100 bases:
>100_bases AATCAAACAATGATTGTTTCAGAAATAGAAAAGTCTTACTTAGGTTAGCAATGAGTACCCCCTACAAATCAATATAATAA AAACCAAGGAACCTTGTTCC
Downstream 100 bases:
>100_bases CTGTACTCATTAGCAGTTGCTCTGCTTACTTAAAGCCACACCGAGTGTGGCTTTTTTATTTTCAGCTTAAGCATTTTGTT CGATGATAGTTTGAGCGTGG
Product: xanthine/uracil/vitamin C permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MLEKLFKLKQNQTTLKQEVIAGLTTFLTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAIGCLVMGLVANYPIALAPGMG LNAFFTYTVVGEMGYSWETALGAVFLSGICFLVLSLVRIREWIVNSIPMSLRIGIAAGIGLFLALLGLKSAGIVVSSPAT LVTMGDITSFPAVMAALGFFLIIAMVHHGMKSAVVISILAITLLGLLFGDVQYQGIVSAPPSIMPTFMKMDLSGVLEVSM LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDDKGRLPRLNRALTADSTATIAGAMLGTSTTTSYVESTAGVSAGGRTGLTA VVVGVLFLGALFISPLAGMVPAYATAGTLFYVAILMMSGLVHVEWEDITEAAPVVVVCILMPLTFSIATGIAMGFISYAL IKLMSGRYKDLSLGVLILAALFIAKFIYG
Sequences:
>Translated_429_residues MLEKLFKLKQNQTTLKQEVIAGLTTFLTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAIGCLVMGLVANYPIALAPGMG LNAFFTYTVVGEMGYSWETALGAVFLSGICFLVLSLVRIREWIVNSIPMSLRIGIAAGIGLFLALLGLKSAGIVVSSPAT LVTMGDITSFPAVMAALGFFLIIAMVHHGMKSAVVISILAITLLGLLFGDVQYQGIVSAPPSIMPTFMKMDLSGVLEVSM LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDDKGRLPRLNRALTADSTATIAGAMLGTSTTTSYVESTAGVSAGGRTGLTA VVVGVLFLGALFISPLAGMVPAYATAGTLFYVAILMMSGLVHVEWEDITEAAPVVVVCILMPLTFSIATGIAMGFISYAL IKLMSGRYKDLSLGVLILAALFIAKFIYG >Mature_429_residues MLEKLFKLKQNQTTLKQEVIAGLTTFLTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAIGCLVMGLVANYPIALAPGMG LNAFFTYTVVGEMGYSWETALGAVFLSGICFLVLSLVRIREWIVNSIPMSLRIGIAAGIGLFLALLGLKSAGIVVSSPAT LVTMGDITSFPAVMAALGFFLIIAMVHHGMKSAVVISILAITLLGLLFGDVQYQGIVSAPPSIMPTFMKMDLSGVLEVSM LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDDKGRLPRLNRALTADSTATIAGAMLGTSTTTSYVESTAGVSAGGRTGLTA VVVGVLFLGALFISPLAGMVPAYATAGTLFYVAILMMSGLVHVEWEDITEAAPVVVVCILMPLTFSIATGIAMGFISYAL IKLMSGRYKDLSLGVLILAALFIAKFIYG
Specific function: High-affinity uptake of adenine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=428, Percent_Identity=52.5700934579439, Blast_Score=462, Evalue=1e-131, Organism=Escherichia coli, GI87082309, Length=426, Percent_Identity=50.9389671361502, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI1790499, Length=425, Percent_Identity=38.8235294117647, Blast_Score=286, Evalue=2e-78, Organism=Escherichia coli, GI48994909, Length=435, Percent_Identity=38.1609195402299, Blast_Score=267, Evalue=9e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 45005; Mature: 45005
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKLFKLKQNQTTLKQEVIAGLTTFLTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAI CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GCLVMGLVANYPIALAPGMGLNAFFTYTVVGEMGYSWETALGAVFLSGICFLVLSLVRIR HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EWIVNSIPMSLRIGIAAGIGLFLALLGLKSAGIVVSSPATLVTMGDITSFPAVMAALGFF HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHH LIIAMVHHGMKSAVVISILAITLLGLLFGDVQYQGIVSAPPSIMPTFMKMDLSGVLEVSM HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDDKGRLPRLNRALTADSTATIAGAMLGTSTT HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCHH TSYVESTAGVSAGGRTGLTAVVVGVLFLGALFISPLAGMVPAYATAGTLFYVAILMMSGL HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VHVEWEDITEAAPVVVVCILMPLTFSIATGIAMGFISYALIKLMSGRYKDLSLGVLILAA EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LFIAKFIYG HHHHHHHCC >Mature Secondary Structure MLEKLFKLKQNQTTLKQEVIAGLTTFLTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAI CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GCLVMGLVANYPIALAPGMGLNAFFTYTVVGEMGYSWETALGAVFLSGICFLVLSLVRIR HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EWIVNSIPMSLRIGIAAGIGLFLALLGLKSAGIVVSSPATLVTMGDITSFPAVMAALGFF HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCHHHHHHHHHHHHHH LIIAMVHHGMKSAVVISILAITLLGLLFGDVQYQGIVSAPPSIMPTFMKMDLSGVLEVSM HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDDKGRLPRLNRALTADSTATIAGAMLGTSTT HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCHH TSYVESTAGVSAGGRTGLTAVVVGVLFLGALFISPLAGMVPAYATAGTLFYVAILMMSGL HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VHVEWEDITEAAPVVVVCILMPLTFSIATGIAMGFISYALIKLMSGRYKDLSLGVLILAA EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LFIAKFIYG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]