| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yejM [H]
Identifier: 157962854
GI number: 157962854
Start: 3722797
End: 3724632
Strand: Reverse
Name: yejM [H]
Synonym: Spea_3036
Alternate gene names: 157962854
Gene position: 3724632-3722797 (Counterclockwise)
Preceding gene: 157962855
Following gene: 157962852
Centisome position: 71.98
GC content: 41.99
Gene sequence:
>1836_bases ATGGTGAAAATGTTACCTTTACGCGCACGAATGAAATCTCACGCTGTGCTAACACTAATCAATAGCTTGATATTTATAGT GTTATCTGTGAGTTACTTGGATTACCTTCCTGCTAACCTGACCTCTCTAGACTGGAGTTATATCGTCATTGCTACAGCTG GGCAGATGGGCTTACTTGCAGGACTGTTAGGCTTGTTTAGTTTGCCGCTTAGCTTGATTAAATCGACTCAGGTTAGATTG TTATCAACATCGGTTATTTTTACTTTAGCACTGATTACCTTATATGGTGATACTCAGGTTTTTGCCCAGTATCGCTTTCA TATTCAACCTGTACTGGTTGAAATGATTTTCTCCGGTGGCATCGTCGAGTTCTCGGTGGCAAATTACCTGTTTGGCGCAT CTATGGTATTGCTGACATTAGCGCTGCAATGTGGACTCTATTGGTTGATATTGACTCGTGGAGGAAACCGACTCAGGCTG GCTGGCCGCTATCTTGCGTACCTACTTTTCTTGTGTGTGCTTACTACGCACATCATCCATATATGGGCAAGTGCTAATGC TGTAAATTCAATTACCAACTTTAGTCGCTTCTTACCGCTGTTTTACCCCGCGACAGCCAACCGGTTAATGCTTAAGTATG GTTTAGTGAATGAAGCTGAATTGGCTCAGCAAAATAAGCTGAAAATCGATAATAAGGGAAATTTATCTTACCCTTTAGCA CCAATAAGTTATCAGCAGGTCACGCCCACTAACGTTCTCTTTATTGTGATTGATTCTTGGCGTCACGATAGTTTTAGCGC GGAAGTAACCCCAAATATTTGGCAGTACGCTCAAGATGGTCAGGTGTTTAAGCAGCATTACTCTACTGGTAATGCGACTC GTGCAGGAATATTTGGCTTATTTTATGGCTTACCAGCCACCTATTGGCATAGTTTTTATCGTAATCGCGAATCGCCAATT ATTATGGATAGAATGCAGCAGCTGGATTATCAGCTAGGTATTTTTTCTTCTGCGCACCTATTAAAACCAGAGTTTGATGA GACGGTTTTTGTTCATGTACCGGATCTAAGAGTACGTTCAAAAGGCGAGACCAAGCCAAGCAGAGACATTGAGATCACTC AACAGTGGCTCGAATGGGATAAACATAAAGATCCTACGCGACCAGCGTTCTCATTTTTATTCTATGATTCTCCCCATGGA TATGATTTTCCAGAGGATTACCCGAACAAATTTGAGCCACAAGTGTCTCGAATGGATTATTTAAGCATCGATAATGATAC CGATAGGCTGCCAATTCTTAACCGCTACAATACCAGTGTGAACTTTAATGATTCACTGATAGGCAAAGTACTCACTCAGC TCAAAGAGTCGGGAGAGTTGGCCAATACATTAGTGGTGATCACCGGTGATCATGGTCAGGAAATCAACGACAACAAGCAA AATTTTTGGGGACATAACGGTAATTTTACCGACCCTCAAATAAAAGTGCCTTTTATCATGTTTGGCGCCGATCTTAAGCC TGGAGTGAATCAATACTTTACTGACCATATGGATTTAGTTCCTACGCTGATGCAAAACTACTTAGGCGCTACAGGGCCTG CAGAAAACTATACAGCTGGCTATAACTTGTTTGAGCAGAATGCGGATAGACGCAAGTGGCTTATTCTTGCAAGTTACAGT GATTATGCCTTAGTTAACGAAAGCAGTATTTTGCATGTTTCTGGCGCCCAAGGCGGTTATCAGTATATGGATAGACACAA TCGCCCTAAAGAAGGTAAGCCTGATTTTCAGCAGTTAAACCAAGCTTATGAGTTGATGAGACGTTACCTGGAGTAA
Upstream 100 bases:
>100_bases AGTTAGAGTAATTGTGAACTTTGTCACGTATTTGTGGAGGGTGAGTGGTTAGACTCCGCGCTTTTCATGTTTCCTAGTAT GGTAAGGGAGACGAGCTGGA
Downstream 100 bases:
>100_bases AAATCGGCTGTGGAGCTTATTGAGCCCGTAATGAATTAGCTGGGTGAACTACAGTGAAGAGCAACTGTATTAGTTACTGA ACAAGAAACCGTGTGGCTTA
Product: sulfatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 611; Mature: 611
Protein sequence:
>611_residues MVKMLPLRARMKSHAVLTLINSLIFIVLSVSYLDYLPANLTSLDWSYIVIATAGQMGLLAGLLGLFSLPLSLIKSTQVRL LSTSVIFTLALITLYGDTQVFAQYRFHIQPVLVEMIFSGGIVEFSVANYLFGASMVLLTLALQCGLYWLILTRGGNRLRL AGRYLAYLLFLCVLTTHIIHIWASANAVNSITNFSRFLPLFYPATANRLMLKYGLVNEAELAQQNKLKIDNKGNLSYPLA PISYQQVTPTNVLFIVIDSWRHDSFSAEVTPNIWQYAQDGQVFKQHYSTGNATRAGIFGLFYGLPATYWHSFYRNRESPI IMDRMQQLDYQLGIFSSAHLLKPEFDETVFVHVPDLRVRSKGETKPSRDIEITQQWLEWDKHKDPTRPAFSFLFYDSPHG YDFPEDYPNKFEPQVSRMDYLSIDNDTDRLPILNRYNTSVNFNDSLIGKVLTQLKESGELANTLVVITGDHGQEINDNKQ NFWGHNGNFTDPQIKVPFIMFGADLKPGVNQYFTDHMDLVPTLMQNYLGATGPAENYTAGYNLFEQNADRRKWLILASYS DYALVNESSILHVSGAQGGYQYMDRHNRPKEGKPDFQQLNQAYELMRRYLE
Sequences:
>Translated_611_residues MVKMLPLRARMKSHAVLTLINSLIFIVLSVSYLDYLPANLTSLDWSYIVIATAGQMGLLAGLLGLFSLPLSLIKSTQVRL LSTSVIFTLALITLYGDTQVFAQYRFHIQPVLVEMIFSGGIVEFSVANYLFGASMVLLTLALQCGLYWLILTRGGNRLRL AGRYLAYLLFLCVLTTHIIHIWASANAVNSITNFSRFLPLFYPATANRLMLKYGLVNEAELAQQNKLKIDNKGNLSYPLA PISYQQVTPTNVLFIVIDSWRHDSFSAEVTPNIWQYAQDGQVFKQHYSTGNATRAGIFGLFYGLPATYWHSFYRNRESPI IMDRMQQLDYQLGIFSSAHLLKPEFDETVFVHVPDLRVRSKGETKPSRDIEITQQWLEWDKHKDPTRPAFSFLFYDSPHG YDFPEDYPNKFEPQVSRMDYLSIDNDTDRLPILNRYNTSVNFNDSLIGKVLTQLKESGELANTLVVITGDHGQEINDNKQ NFWGHNGNFTDPQIKVPFIMFGADLKPGVNQYFTDHMDLVPTLMQNYLGATGPAENYTAGYNLFEQNADRRKWLILASYS DYALVNESSILHVSGAQGGYQYMDRHNRPKEGKPDFQQLNQAYELMRRYLE >Mature_611_residues MVKMLPLRARMKSHAVLTLINSLIFIVLSVSYLDYLPANLTSLDWSYIVIATAGQMGLLAGLLGLFSLPLSLIKSTQVRL LSTSVIFTLALITLYGDTQVFAQYRFHIQPVLVEMIFSGGIVEFSVANYLFGASMVLLTLALQCGLYWLILTRGGNRLRL AGRYLAYLLFLCVLTTHIIHIWASANAVNSITNFSRFLPLFYPATANRLMLKYGLVNEAELAQQNKLKIDNKGNLSYPLA PISYQQVTPTNVLFIVIDSWRHDSFSAEVTPNIWQYAQDGQVFKQHYSTGNATRAGIFGLFYGLPATYWHSFYRNRESPI IMDRMQQLDYQLGIFSSAHLLKPEFDETVFVHVPDLRVRSKGETKPSRDIEITQQWLEWDKHKDPTRPAFSFLFYDSPHG YDFPEDYPNKFEPQVSRMDYLSIDNDTDRLPILNRYNTSVNFNDSLIGKVLTQLKESGELANTLVVITGDHGQEINDNKQ NFWGHNGNFTDPQIKVPFIMFGADLKPGVNQYFTDHMDLVPTLMQNYLGATGPAENYTAGYNLFEQNADRRKWLILASYS DYALVNESSILHVSGAQGGYQYMDRHNRPKEGKPDFQQLNQAYELMRRYLE
Specific function: Unknown
COG id: COG3083
COG function: function code R; Predicted hydrolase of alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0842 [H]
Homologues:
Organism=Escherichia coli, GI1788515, Length=608, Percent_Identity=27.9605263157895, Blast_Score=205, Evalue=7e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012159 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 69732; Mature: 69732
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKMLPLRARMKSHAVLTLINSLIFIVLSVSYLDYLPANLTSLDWSYIVIATAGQMGLLA CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHH GLLGLFSLPLSLIKSTQVRLLSTSVIFTLALITLYGDTQVFAQYRFHIQPVLVEMIFSGG HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC IVEFSVANYLFGASMVLLTLALQCGLYWLILTRGGNRLRLAGRYLAYLLFLCVLTTHIIH CEEEHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHH IWASANAVNSITNFSRFLPLFYPATANRLMLKYGLVNEAELAQQNKLKIDNKGNLSYPLA HHHCCHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCHHHHHHCCCEEECCCCCCCCCCC PISYQQVTPTNVLFIVIDSWRHDSFSAEVTPNIWQYAQDGQVFKQHYSTGNATRAGIFGL CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCHHHHHHHH FYGLPATYWHSFYRNRESPIIMDRMQQLDYQLGIFSSAHLLKPEFDETVFVHVPDLRVRS HHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEECC KGETKPSRDIEITQQWLEWDKHKDPTRPAFSFLFYDSPHGYDFPEDYPNKFEPQVSRMDY CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCEE LSIDNDTDRLPILNRYNTSVNFNDSLIGKVLTQLKESGELANTLVVITGDHGQEINDNKQ EECCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCH NFWGHNGNFTDPQIKVPFIMFGADLKPGVNQYFTDHMDLVPTLMQNYLGATGPAENYTAG HCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC YNLFEQNADRRKWLILASYSDYALVNESSILHVSGAQGGYQYMDRHNRPKEGKPDFQQLN CHHHHCCCCCCEEEEEEECCCEEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCHHHHHH QAYELMRRYLE HHHHHHHHHCC >Mature Secondary Structure MVKMLPLRARMKSHAVLTLINSLIFIVLSVSYLDYLPANLTSLDWSYIVIATAGQMGLLA CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHH GLLGLFSLPLSLIKSTQVRLLSTSVIFTLALITLYGDTQVFAQYRFHIQPVLVEMIFSGG HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC IVEFSVANYLFGASMVLLTLALQCGLYWLILTRGGNRLRLAGRYLAYLLFLCVLTTHIIH CEEEHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHH IWASANAVNSITNFSRFLPLFYPATANRLMLKYGLVNEAELAQQNKLKIDNKGNLSYPLA HHHCCHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCHHHHHHCCCEEECCCCCCCCCCC PISYQQVTPTNVLFIVIDSWRHDSFSAEVTPNIWQYAQDGQVFKQHYSTGNATRAGIFGL CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCHHHHHHHH FYGLPATYWHSFYRNRESPIIMDRMQQLDYQLGIFSSAHLLKPEFDETVFVHVPDLRVRS HHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEECC KGETKPSRDIEITQQWLEWDKHKDPTRPAFSFLFYDSPHGYDFPEDYPNKFEPQVSRMDY CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCEE LSIDNDTDRLPILNRYNTSVNFNDSLIGKVLTQLKESGELANTLVVITGDHGQEINDNKQ EECCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCH NFWGHNGNFTDPQIKVPFIMFGADLKPGVNQYFTDHMDLVPTLMQNYLGATGPAENYTAG HCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC YNLFEQNADRRKWLILASYSDYALVNESSILHVSGAQGGYQYMDRHNRPKEGKPDFQQLN CHHHHCCCCCCEEEEEEECCCEEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCHHHHHH QAYELMRRYLE HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]