Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157962852

Identifier: 157962852

GI number: 157962852

Start: 3720794

End: 3721255

Strand: Reverse

Name: 157962852

Synonym: Spea_3034

Alternate gene names: NA

Gene position: 3721255-3720794 (Counterclockwise)

Preceding gene: 157962854

Following gene: 157962850

Centisome position: 71.91

GC content: 45.89

Gene sequence:

>462_bases
ATGTCATCAGTTAACAAAGGCTTAAAAGCCATCGCACTTCTAGAGGCCACGAAAGGTGTTATATCGGTATTGGTTGTCTT
TGGACTGCATAAACTCGCAGGGCAGGATATTCAGATGGTGGTGGAAGAGTTACTGCGGCACTCTCACTTAAACCCTGCTA
ATCACTTGGTGCAGGAGGTGATGACACAGGCTGGCAAGGTGACAGAGGCTAATATCAACTTGGTGATAGCGGGGGCCTTA
CTTTACGCCGGCGTACGTTTTATCGAAGCCTATGGATTATGGCATAGCCTAGTGTGGACAGAGTGGTTTGCATTATTAAG
TGGTGGGATCTATCTGCCATTTGAGGCCTATGAGCTATTCGCTAAACCTAATCTAGTCACGGCTGCGGTGTTAATGATTA
ACTTAGTCGTTGTGGGTTATATGTACAGAGTCATAAAACACAAGCCGCATCCTAAGTCTTAG

Upstream 100 bases:

>100_bases
GGTAATTAATGAGGCTCTCAAGCATTGTAAAAAAGCGTAAAATTAAAGGTTCACACTATTTAATAGCTAGAGAGCTGCAT
AGCAAGCCCTAAAGGATCTC

Downstream 100 bases:

>100_bases
GGTTATTGCATAATGCCAAGTTGCCTGTACACGTGACTTGGTTAGCGGCGGCTCAACTCTAATAACTTAGAAAGTAACTC
AGGAAAGTAACTCAGGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSSVNKGLKAIALLEATKGVISVLVVFGLHKLAGQDIQMVVEELLRHSHLNPANHLVQEVMTQAGKVTEANINLVIAGAL
LYAGVRFIEAYGLWHSLVWTEWFALLSGGIYLPFEAYELFAKPNLVTAAVLMINLVVVGYMYRVIKHKPHPKS

Sequences:

>Translated_153_residues
MSSVNKGLKAIALLEATKGVISVLVVFGLHKLAGQDIQMVVEELLRHSHLNPANHLVQEVMTQAGKVTEANINLVIAGAL
LYAGVRFIEAYGLWHSLVWTEWFALLSGGIYLPFEAYELFAKPNLVTAAVLMINLVVVGYMYRVIKHKPHPKS
>Mature_152_residues
SSVNKGLKAIALLEATKGVISVLVVFGLHKLAGQDIQMVVEELLRHSHLNPANHLVQEVMTQAGKVTEANINLVIAGALL
YAGVRFIEAYGLWHSLVWTEWFALLSGGIYLPFEAYELFAKPNLVTAAVLMINLVVVGYMYRVIKHKPHPKS

Specific function: Unknown

COG id: COG3305

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16875; Mature: 16744

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVNKGLKAIALLEATKGVISVLVVFGLHKLAGQDIQMVVEELLRHSHLNPANHLVQEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHH
MTQAGKVTEANINLVIAGALLYAGVRFIEAYGLWHSLVWTEWFALLSGGIYLPFEAYELF
HHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AKPNLVTAAVLMINLVVVGYMYRVIKHKPHPKS
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSVNKGLKAIALLEATKGVISVLVVFGLHKLAGQDIQMVVEELLRHSHLNPANHLVQEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHH
MTQAGKVTEANINLVIAGALLYAGVRFIEAYGLWHSLVWTEWFALLSGGIYLPFEAYELF
HHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AKPNLVTAAVLMINLVVVGYMYRVIKHKPHPKS
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA