| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962801
Identifier: 157962801
GI number: 157962801
Start: 3655537
End: 3656271
Strand: Reverse
Name: 157962801
Synonym: Spea_2983
Alternate gene names: NA
Gene position: 3656271-3655537 (Counterclockwise)
Preceding gene: 157962802
Following gene: 157962800
Centisome position: 70.66
GC content: 47.48
Gene sequence:
>735_bases GTGAGTTGCTTACTGGATAACTTAAAGCAAGCGTATTTAGATGGCGAGTTAGCAGCGGCTGTTGCTGCGCTCAAGAGTGA GGATTTGCTCTTCGATGTTAGTCAGTATCTTGTCGATGCTGCTAACGCCGAAGAAACACTCCGGAGTCACAGCGACACCT TAATCGTACTGGCTCATGGTGCAGGTGCCAATATGCAACATGAGTTTATGACGGTAATGGCCAAAGGCTTGAGTTCGAGC GCCACAGTGGTTCGCTTTAACTTCCCTTACATGCGCGCTAATGCCATCGATGGCAAGCGTCGCCCACCGGATAGAGCGCC TAAGTTACTTGCCGATTATGCACTGCAGTTAGCGATTTTGAGCCAGCAGTTTAAGCCTAAGAAAATCTATTTAGTGGGTA AGTCCATGGGAGGGCGTATGTCGGCGATTTTGGCCGAGAGCCTATCTGTGGATGGGGTCATTTGTTTAGGTTACCCATTT ATTCCCCTAAGCGGTGGTGAGCCAAGATTAGAGCCCATAGAGAAGTGTTTGGCACCGATGATGGTGATCCAAGGCGAGCG CGATAAGTTTGGTCATAAGGGCTTAGTTGAAACTTGGCCAATAATGAAAAAAGTACAACTGCATTGGTTAACCGATGGTG ATCATAGTTTTAAGCCAAGAAAGTCGTCAGGTACGACATTAGAGGCTAACCTAGCTGAGACTGTCGCGCTTATCAAAGCG TTTATTGTGCAGTAA
Upstream 100 bases:
>100_bases AGTGCATATTATTTAGTGTGTCAACAAAACCATGCCGAGATCGGTAAAGTGGTAGCCTTTAGAGAATGGATGCTGGATAT GTTCGAAGAGGAGACCCGTA
Downstream 100 bases:
>100_bases CAAAAACTTTAATTGGGCAGTCGTTAACCATATTTATGATTTATCTTTGGCTGTTTGATAGCCTTTTGGAGGTTAGATGC GTAATGGATTTTTGCTGCTA
Product: hydrolase of the alpha/beta-hydrolase fold-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSCLLDNLKQAYLDGELAAAVAALKSEDLLFDVSQYLVDAANAEETLRSHSDTLIVLAHGAGANMQHEFMTVMAKGLSSS ATVVRFNFPYMRANAIDGKRRPPDRAPKLLADYALQLAILSQQFKPKKIYLVGKSMGGRMSAILAESLSVDGVICLGYPF IPLSGGEPRLEPIEKCLAPMMVIQGERDKFGHKGLVETWPIMKKVQLHWLTDGDHSFKPRKSSGTTLEANLAETVALIKA FIVQ
Sequences:
>Translated_244_residues MSCLLDNLKQAYLDGELAAAVAALKSEDLLFDVSQYLVDAANAEETLRSHSDTLIVLAHGAGANMQHEFMTVMAKGLSSS ATVVRFNFPYMRANAIDGKRRPPDRAPKLLADYALQLAILSQQFKPKKIYLVGKSMGGRMSAILAESLSVDGVICLGYPF IPLSGGEPRLEPIEKCLAPMMVIQGERDKFGHKGLVETWPIMKKVQLHWLTDGDHSFKPRKSSGTTLEANLAETVALIKA FIVQ >Mature_243_residues SCLLDNLKQAYLDGELAAAVAALKSEDLLFDVSQYLVDAANAEETLRSHSDTLIVLAHGAGANMQHEFMTVMAKGLSSSA TVVRFNFPYMRANAIDGKRRPPDRAPKLLADYALQLAILSQQFKPKKIYLVGKSMGGRMSAILAESLSVDGVICLGYPFI PLSGGEPRLEPIEKCLAPMMVIQGERDKFGHKGLVETWPIMKKVQLHWLTDGDHSFKPRKSSGTTLEANLAETVALIKAF IVQ
Specific function: Unknown
COG id: COG3571
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26689; Mature: 26558
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCLLDNLKQAYLDGELAAAVAALKSEDLLFDVSQYLVDAANAEETLRSHSDTLIVLAHG CCHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEEC AGANMQHEFMTVMAKGLSSSATVVRFNFPYMRANAIDGKRRPPDRAPKLLADYALQLAIL CCCCCHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH SQQFKPKKIYLVGKSMGGRMSAILAESLSVDGVICLGYPFIPLSGGEPRLEPIEKCLAPM HHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHH MVIQGERDKFGHKGLVETWPIMKKVQLHWLTDGDHSFKPRKSSGTTLEANLAETVALIKA HHHCCCCHHCCCCCCHHHHHHHHEEEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHH FIVQ HHCC >Mature Secondary Structure SCLLDNLKQAYLDGELAAAVAALKSEDLLFDVSQYLVDAANAEETLRSHSDTLIVLAHG CHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEEC AGANMQHEFMTVMAKGLSSSATVVRFNFPYMRANAIDGKRRPPDRAPKLLADYALQLAIL CCCCCHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH SQQFKPKKIYLVGKSMGGRMSAILAESLSVDGVICLGYPFIPLSGGEPRLEPIEKCLAPM HHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHH MVIQGERDKFGHKGLVETWPIMKKVQLHWLTDGDHSFKPRKSSGTTLEANLAETVALIKA HHHCCCCHHCCCCCCHHHHHHHHEEEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHH FIVQ HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA