| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962740
Identifier: 157962740
GI number: 157962740
Start: 3575755
End: 3576732
Strand: Reverse
Name: 157962740
Synonym: Spea_2922
Alternate gene names: NA
Gene position: 3576732-3575755 (Counterclockwise)
Preceding gene: 157962746
Following gene: 157962737
Centisome position: 69.12
GC content: 42.94
Gene sequence:
>978_bases ATGCCCCGTGCCAGAAGTACACAAATCAGTCTTGAAGACACGCCTTATTATCATTGTTGTAGCCGTGTGGTTAGGCGCGC TTTCTTATGCGGTGATGATAAGTTTACAGGTAAGAATTATGACCATCGCCGCGGCTGGGTTGAAGCGCAAATTCTCAAGT TAACAGAGGTCTTTGCCATTGATGTTGCTGCATATTCTGTGATGAGTAACCATTTGCATGTGGTGCTTTATATCGACCTT GATACGGTCAATAGCTGGTCAGATAGGGAGGTCGTTGAGCAATGGCAAAAGTTGTTTAAAGGGACTGATTTAACACAAAA GTTTGCTAAAGGTGAAGTGATAGATGAGTGTATGGTTGCATTACTAAAGCGGCTAATAGCGACCTATCGTTCGCGCTTGT GTGACATTAGCTGGTTTATGCGTTGTCTGAATGAACCTATCGCACGACAAGCTAACTATGAAGATAACTGTACAGGCCAC TTCTGGGAGGGGCGCTTCAAGAGCCAAGCATTACTTGATGAAGCGGCTGTACTTGCTTGCATGGCTTATGTAGAGCTCAA CCCCATTCGTGCCAAGATGGCTAAAACGCCCGAAAAGTCAGATTACACCAGTTTGCAATTAAGGGTAAATGCGGCACTTA AAGGAAATCAGCCTGCTAAATTACTACCTTTTATTGGCAATGAAAGAAAGCATCAGCCAAAAGGAATTAATTTCTTACTG CAAGATTATTTAATGCTGGTAGATGAAACGGGTCGCATCATTCGTGATGATAAACGTGGCGCGCTTTGTGCCAAAGTAGA GAACATCCTGAATAGGCTTAATATTGCAACTGATAACTGGATTAAAATCACTTCTGATTTTGGCAAGTTGTTCCATGGGC CTGTTGGTTCTCTTCAGGAGTTAACTGACTATTGTGAGCATTTAGAAAAGCGACGACGGCACTTTGCCAATAGTTGTCAG TACCTTTTGGTAAGCTAA
Upstream 100 bases:
>100_bases TACATAATGGCAAAAAATAGCAACCCTAGACACCCATACATAATGGCATGTTTACCGGCCTCTAACTAAGCTTTAATTAT TGCTGAAGTAGGAGGTTGTT
Downstream 100 bases:
>100_bases GCAATCCAAATACCCCAAACAACCTTCTTGATCAATTCTTAGGCTCATCCTCAGAGCTGTTTCTCTTTGTCTCAAATTCG TCAAATCTTAGCTTAATACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MPRARSTQISLEDTPYYHCCSRVVRRAFLCGDDKFTGKNYDHRRGWVEAQILKLTEVFAIDVAAYSVMSNHLHVVLYIDL DTVNSWSDREVVEQWQKLFKGTDLTQKFAKGEVIDECMVALLKRLIATYRSRLCDISWFMRCLNEPIARQANYEDNCTGH FWEGRFKSQALLDEAAVLACMAYVELNPIRAKMAKTPEKSDYTSLQLRVNAALKGNQPAKLLPFIGNERKHQPKGINFLL QDYLMLVDETGRIIRDDKRGALCAKVENILNRLNIATDNWIKITSDFGKLFHGPVGSLQELTDYCEHLEKRRRHFANSCQ YLLVS
Sequences:
>Translated_325_residues MPRARSTQISLEDTPYYHCCSRVVRRAFLCGDDKFTGKNYDHRRGWVEAQILKLTEVFAIDVAAYSVMSNHLHVVLYIDL DTVNSWSDREVVEQWQKLFKGTDLTQKFAKGEVIDECMVALLKRLIATYRSRLCDISWFMRCLNEPIARQANYEDNCTGH FWEGRFKSQALLDEAAVLACMAYVELNPIRAKMAKTPEKSDYTSLQLRVNAALKGNQPAKLLPFIGNERKHQPKGINFLL QDYLMLVDETGRIIRDDKRGALCAKVENILNRLNIATDNWIKITSDFGKLFHGPVGSLQELTDYCEHLEKRRRHFANSCQ YLLVS >Mature_324_residues PRARSTQISLEDTPYYHCCSRVVRRAFLCGDDKFTGKNYDHRRGWVEAQILKLTEVFAIDVAAYSVMSNHLHVVLYIDLD TVNSWSDREVVEQWQKLFKGTDLTQKFAKGEVIDECMVALLKRLIATYRSRLCDISWFMRCLNEPIARQANYEDNCTGHF WEGRFKSQALLDEAAVLACMAYVELNPIRAKMAKTPEKSDYTSLQLRVNAALKGNQPAKLLPFIGNERKHQPKGINFLLQ DYLMLVDETGRIIRDDKRGALCAKVENILNRLNIATDNWIKITSDFGKLFHGPVGSLQELTDYCEHLEKRRRHFANSCQY LLVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37493; Mature: 37361
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRARSTQISLEDTPYYHCCSRVVRRAFLCGDDKFTGKNYDHRRGWVEAQILKLTEVFAI CCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHH DVAAYSVMSNHLHVVLYIDLDTVNSWSDREVVEQWQKLFKGTDLTQKFAKGEVIDECMVA HHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHH LLKRLIATYRSRLCDISWFMRCLNEPIARQANYEDNCTGHFWEGRFKSQALLDEAAVLAC HHHHHHHHHHHHHCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH MAYVELNPIRAKMAKTPEKSDYTSLQLRVNAALKGNQPAKLLPFIGNERKHQPKGINFLL HHHHHCCHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHH QDYLMLVDETGRIIRDDKRGALCAKVENILNRLNIATDNWIKITSDFGKLFHGPVGSLQE HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCCCHHH LTDYCEHLEKRRRHFANSCQYLLVS HHHHHHHHHHHHHHHHCCCCEEEEC >Mature Secondary Structure PRARSTQISLEDTPYYHCCSRVVRRAFLCGDDKFTGKNYDHRRGWVEAQILKLTEVFAI CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHH DVAAYSVMSNHLHVVLYIDLDTVNSWSDREVVEQWQKLFKGTDLTQKFAKGEVIDECMVA HHHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHH LLKRLIATYRSRLCDISWFMRCLNEPIARQANYEDNCTGHFWEGRFKSQALLDEAAVLAC HHHHHHHHHHHHHCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH MAYVELNPIRAKMAKTPEKSDYTSLQLRVNAALKGNQPAKLLPFIGNERKHQPKGINFLL HHHHHCCHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHH QDYLMLVDETGRIIRDDKRGALCAKVENILNRLNIATDNWIKITSDFGKLFHGPVGSLQE HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCCCHHH LTDYCEHLEKRRRHFANSCQYLLVS HHHHHHHHHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA