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The map label for this gene is 157962737

Identifier: 157962737

GI number: 157962737

Start: 3571046

End: 3571387

Strand: Reverse

Name: 157962737

Synonym: Spea_2919

Alternate gene names: NA

Gene position: 3571387-3571046 (Counterclockwise)

Preceding gene: 157962740

Following gene: 157962732

Centisome position: 69.02

GC content: 43.57

Gene sequence:

>342_bases
TTGCGCGCTTACTCCGAAGCATTATTCAGAACCTTAAAGTATCGGCCAGAATGGCCTAGCTCTGGCTTTAAAAACATCAC
CGAGGCACGGGAATGGGTAGAAACGTTCGTGACTTGGTACAATACCAAACATAAGCACAGTAAGCTCAATTTTGTATCAC
CGAGTGAGCGACATGCGATGCAAGATAAAGCGATTTTATCTAAGCGTAAGGAGGTACTAGAAGAAGCAAGATCAAGAAAC
CCTAAACGCTGGCCAAACGGTATAAGGAACTGTGACGTTATCGGTGAGGTAGTGTTGAACCCAGAAAAAGAGTCTGAAAC
TGAAACAAGAAATGCAGCTTAA

Upstream 100 bases:

>100_bases
ACGCTGTGGCCAAAAGGCAATGAGAGTTGGAAAGAGATTGCCCCATGCTCTTTCGTGATCAATATAACTCTTCGCACTAT
AGCGGGCATCTACCCTGACA

Downstream 100 bases:

>100_bases
AATTTAAGTAAAGAGTGCCAACTACCTTGAAAAACACCGCAGTCCATACAAGAGCAGACTAGGTGGAAGAGATTTTTTCC
ATTTTTATCTTTGTAAGTGT

Product: integrase, catalytic region

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; ISRin3 Transposase; Transposase Degenerate; Integrase Catalytic Domain-Containing Protein; Transposase Of; IS5 Family Transposase OrfB; Transposase IS3 Family

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MRAYSEALFRTLKYRPEWPSSGFKNITEAREWVETFVTWYNTKHKHSKLNFVSPSERHAMQDKAILSKRKEVLEEARSRN
PKRWPNGIRNCDVIGEVVLNPEKESETETRNAA

Sequences:

>Translated_113_residues
MRAYSEALFRTLKYRPEWPSSGFKNITEAREWVETFVTWYNTKHKHSKLNFVSPSERHAMQDKAILSKRKEVLEEARSRN
PKRWPNGIRNCDVIGEVVLNPEKESETETRNAA
>Mature_113_residues
MRAYSEALFRTLKYRPEWPSSGFKNITEAREWVETFVTWYNTKHKHSKLNFVSPSERHAMQDKAILSKRKEVLEEARSRN
PKRWPNGIRNCDVIGEVVLNPEKESETETRNAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13336; Mature: 13336

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAYSEALFRTLKYRPEWPSSGFKNITEAREWVETFVTWYNTKHKHSKLNFVSPSERHAM
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
QDKAILSKRKEVLEEARSRNPKRWPNGIRNCDVIGEVVLNPEKESETETRNAA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRAYSEALFRTLKYRPEWPSSGFKNITEAREWVETFVTWYNTKHKHSKLNFVSPSERHAM
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
QDKAILSKRKEVLEEARSRNPKRWPNGIRNCDVIGEVVLNPEKESETETRNAA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA