| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962714
Identifier: 157962714
GI number: 157962714
Start: 3534213
End: 3534515
Strand: Reverse
Name: 157962714
Synonym: Spea_2895
Alternate gene names: NA
Gene position: 3534515-3534213 (Counterclockwise)
Preceding gene: 157962715
Following gene: 157962711
Centisome position: 68.31
GC content: 38.94
Gene sequence:
>303_bases ATGAATAAACCTTACTCCTCATTTGCTGAGTTTTATCCTTTTTATCTTTCGCAACACCAAGATAAGACATGCCGAATACT TCACTACATTGGAAGTTGCTTGGTGATCCTAACACTAGTTTATTGTGTGTTAAATTCGCAATGGGGCATGTTATTGCTGT TACCCGTAATAGGTTATGGCTTTGCTTGGATCGGGCACTTTGTTTTTGAGCAAAATAGGCCAGCGACTTTCAAATACCCT TTGTATAGCTTTATGGCGGATTGGGTAATGTTGTATAGAGCGCTAACTCATAGAAAGTACTGA
Upstream 100 bases:
>100_bases GCTCATATCAAACTATTTACACACCATGGTTTTGAAATGATAGAGCCCCTTACCATAGGTAAAGTAAGCGGAGAGCTACT GTTCTATAGAGGACTGGTGA
Downstream 100 bases:
>100_bases TTATTCGCTTTGAGACAGTGATTATGTGCGAGATCTCTCACCTTGCTGTGGGAGATAAATTGGGGAACATGAAGATAATA GTTGGCTCTGGGTTTTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MNKPYSSFAEFYPFYLSQHQDKTCRILHYIGSCLVILTLVYCVLNSQWGMLLLLPVIGYGFAWIGHFVFEQNRPATFKYP LYSFMADWVMLYRALTHRKY
Sequences:
>Translated_100_residues MNKPYSSFAEFYPFYLSQHQDKTCRILHYIGSCLVILTLVYCVLNSQWGMLLLLPVIGYGFAWIGHFVFEQNRPATFKYP LYSFMADWVMLYRALTHRKY >Mature_100_residues MNKPYSSFAEFYPFYLSQHQDKTCRILHYIGSCLVILTLVYCVLNSQWGMLLLLPVIGYGFAWIGHFVFEQNRPATFKYP LYSFMADWVMLYRALTHRKY
Specific function: Unknown
COG id: COG4323
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11934; Mature: 11934
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPYSSFAEFYPFYLSQHQDKTCRILHYIGSCLVILTLVYCVLNSQWGMLLLLPVIGYG CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FAWIGHFVFEQNRPATFKYPLYSFMADWVMLYRALTHRKY HHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKPYSSFAEFYPFYLSQHQDKTCRILHYIGSCLVILTLVYCVLNSQWGMLLLLPVIGYG CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FAWIGHFVFEQNRPATFKYPLYSFMADWVMLYRALTHRKY HHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA