| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yqcC [C]
Identifier: 157962711
GI number: 157962711
Start: 3531208
End: 3531528
Strand: Reverse
Name: yqcC [C]
Synonym: Spea_2892
Alternate gene names: 157962711
Gene position: 3531528-3531208 (Counterclockwise)
Preceding gene: 157962714
Following gene: 157962710
Centisome position: 68.25
GC content: 43.93
Gene sequence:
>321_bases TTGAGAACTGTAAATGCAAGGGAAAAGCTATTAGCTTTAGAAACCGAGTTGGCGAAACAAGGCTTGTTAAGTACAGTTGC ACCAACAGAGCAAGCGTTGGCTAGCACTACGCCATTTGCGTGCGATGTGATGCCATTTGAGCAATGGTTACAGTTTATAT TCTTACCGAAAATGCATTACTTGATAGACAATCAAATGCCGCTACCGACAGCGATATCGATAGCACCAATGGCGGAACAT GTTTGGGCCGCTAACATTGAGTATAAGCGAGTCATTCAGCTGCTCACTGAGCTAGATGCATTGTTGAGTCATGCACCATA A
Upstream 100 bases:
>100_bases ATTAGCGCATATTATAGGGATAAGTCAGTCTAGATGGTATCATCTCGCGCGAATTTTCCAGCGGTGAAAAGATTAAATTG ATGACAGTGAGAGGGGCGAA
Downstream 100 bases:
>100_bases CGGTATTACAAGAGATATATACAATGAGTGATAACACTAAAAATCCCTCTCAAAGTGAACAACTTGATGAGAGCCTACTC GAACAAGACTTATGTCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MRTVNAREKLLALETELAKQGLLSTVAPTEQALASTTPFACDVMPFEQWLQFIFLPKMHYLIDNQMPLPTAISIAPMAEH VWAANIEYKRVIQLLTELDALLSHAP
Sequences:
>Translated_106_residues MRTVNAREKLLALETELAKQGLLSTVAPTEQALASTTPFACDVMPFEQWLQFIFLPKMHYLIDNQMPLPTAISIAPMAEH VWAANIEYKRVIQLLTELDALLSHAP >Mature_106_residues MRTVNAREKLLALETELAKQGLLSTVAPTEQALASTTPFACDVMPFEQWLQFIFLPKMHYLIDNQMPLPTAISIAPMAEH VWAANIEYKRVIQLLTELDALLSHAP
Specific function: Unknown
COG id: COG3098
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11918; Mature: 11918
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTVNAREKLLALETELAKQGLLSTVAPTEQALASTTPFACDVMPFEQWLQFIFLPKMHY CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHH LIDNQMPLPTAISIAPMAEHVWAANIEYKRVIQLLTELDALLSHAP HHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRTVNAREKLLALETELAKQGLLSTVAPTEQALASTTPFACDVMPFEQWLQFIFLPKMHY CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHH LIDNQMPLPTAISIAPMAEHVWAANIEYKRVIQLLTELDALLSHAP HHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA