| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is pyrH [H]
Identifier: 157962702
GI number: 157962702
Start: 3521496
End: 3522224
Strand: Reverse
Name: pyrH [H]
Synonym: Spea_2883
Alternate gene names: 157962702
Gene position: 3522224-3521496 (Counterclockwise)
Preceding gene: 157962703
Following gene: 157962701
Centisome position: 68.07
GC content: 44.72
Gene sequence:
>729_bases ATGAGTACCAATCCTAAACCTGCTTTTCGTCGTGTTCTTTTAAAACTAAGTGGTGAAGCCCTAATGGGTGAAGAAGGCTT CGGCATTGATCCTAAAGTGCTTGATCGTATGGGGCAGGAGATCAAAGAGCTAGTTGAGCTAGGTATTCAAGTGGGTGTTG TCATTGGCGGTGGTAACTTGTTCCGTGGCGAAGGTCTAGCGAACGCGGGTATGAACCGTGTAGTGGGCGATCACATGGGC ATGTTGGCAACAGTGATGAACGGCTTAGCAATGCGTGATTCGTTGCACCGTGCATATGTAAATGCACGTTTAATGTCAGC TATTCCGCTTAAAGGCGTGTGTGATGACTATAACTGGGCTGAAGCAATTAGTTTGCTTAAATCAGGCCGTGTTGTTATTT TTGCTGCTGGTACAGGTAACCCATTCTGTACGACTGACTCTGCTGCGTGTTTACGCGGTATCGAGATTGAAGCAGAAGTA GTGATTAAAGGCACCAAAGTTGACGGCGTTTATTCAGATGATCCAGTTAAAAATCCAGAAGCCGTCAAGTATGATGTTAT GGGGTACAATGAAGTACTCGAAAAAGAATTGAAAGTAATGGATTTGGCTGCATTCACTATGGCCAGAGACCATAATATGC CATTGCTCGTTTTTAACATGAATAAACCTGGTGCACTGCGCCGCGTTATCATGGGCGAGCAAGAAGGCACAATGATTAAA GCTGTTTAA
Upstream 100 bases:
>100_bases TCTTATCGTATATACTCGAATAGTTTTTGTCTTGTTAAGTAACATTCGGTAAAACTATTCCAGTGTAGATCCCCTATCGC CATAATCAGGACTAATAAAT
Downstream 100 bases:
>100_bases GCTATATTTAGTGACTTAAAAGGACATATAACGTGATAAACGAAATTAAAAGCGATGCGCAAACTCGCATGGACAAGTGT GTTGAGTCGACAAAAACTCA
Product: uridylate kinase
Products: NA
Alternate protein names: UK; Uridine monophosphate kinase; UMP kinase; UMPK [H]
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MSTNPKPAFRRVLLKLSGEALMGEEGFGIDPKVLDRMGQEIKELVELGIQVGVVIGGGNLFRGEGLANAGMNRVVGDHMG MLATVMNGLAMRDSLHRAYVNARLMSAIPLKGVCDDYNWAEAISLLKSGRVVIFAAGTGNPFCTTDSAACLRGIEIEAEV VIKGTKVDGVYSDDPVKNPEAVKYDVMGYNEVLEKELKVMDLAAFTMARDHNMPLLVFNMNKPGALRRVIMGEQEGTMIK AV
Sequences:
>Translated_242_residues MSTNPKPAFRRVLLKLSGEALMGEEGFGIDPKVLDRMGQEIKELVELGIQVGVVIGGGNLFRGEGLANAGMNRVVGDHMG MLATVMNGLAMRDSLHRAYVNARLMSAIPLKGVCDDYNWAEAISLLKSGRVVIFAAGTGNPFCTTDSAACLRGIEIEAEV VIKGTKVDGVYSDDPVKNPEAVKYDVMGYNEVLEKELKVMDLAAFTMARDHNMPLLVFNMNKPGALRRVIMGEQEGTMIK AV >Mature_241_residues STNPKPAFRRVLLKLSGEALMGEEGFGIDPKVLDRMGQEIKELVELGIQVGVVIGGGNLFRGEGLANAGMNRVVGDHMGM LATVMNGLAMRDSLHRAYVNARLMSAIPLKGVCDDYNWAEAISLLKSGRVVIFAAGTGNPFCTTDSAACLRGIEIEAEVV IKGTKVDGVYSDDPVKNPEAVKYDVMGYNEVLEKELKVMDLAAFTMARDHNMPLLVFNMNKPGALRRVIMGEQEGTMIKA V
Specific function: Catalyzes the reversible phosphorylation of UMP to UDP [H]
COG id: COG0528
COG function: function code F; Uridylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UMP kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786367, Length=239, Percent_Identity=79.9163179916318, Blast_Score=404, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR011817 - InterPro: IPR015963 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.4.22 [H]
Molecular weight: Translated: 26177; Mature: 26046
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNPKPAFRRVLLKLSGEALMGEEGFGIDPKVLDRMGQEIKELVELGIQVGVVIGGGNL CCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCE FRGEGLANAGMNRVVGDHMGMLATVMNGLAMRDSLHRAYVNARLMSAIPLKGVCDDYNWA EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH EAISLLKSGRVVIFAAGTGNPFCTTDSAACLRGIEIEAEVVIKGTKVDGVYSDDPVKNPE HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCEEEEEEEEEECEECCEECCCCCCCCC AVKYDVMGYNEVLEKELKVMDLAAFTMARDHNMPLLVFNMNKPGALRRVIMGEQEGTMIK CEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEE AV EC >Mature Secondary Structure STNPKPAFRRVLLKLSGEALMGEEGFGIDPKVLDRMGQEIKELVELGIQVGVVIGGGNL CCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCE FRGEGLANAGMNRVVGDHMGMLATVMNGLAMRDSLHRAYVNARLMSAIPLKGVCDDYNWA EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH EAISLLKSGRVVIFAAGTGNPFCTTDSAACLRGIEIEAEVVIKGTKVDGVYSDDPVKNPE HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCEEEEEEEEEECEECCEECCCCCCCCC AVKYDVMGYNEVLEKELKVMDLAAFTMARDHNMPLLVFNMNKPGALRRVIMGEQEGTMIK CEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEE AV EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA