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The map label for this gene is yedQ [H]

Identifier: 157962568

GI number: 157962568

Start: 3357452

End: 3358237

Strand: Reverse

Name: yedQ [H]

Synonym: Spea_2747

Alternate gene names: 157962568

Gene position: 3358237-3357452 (Counterclockwise)

Preceding gene: 157962569

Following gene: 157962566

Centisome position: 64.9

GC content: 42.49

Gene sequence:

>786_bases
ATGCCGATTTCGTTGCGATCAGCTAGGCGTTATTTAGTACAAAGAATGAGACATATAATTCAAAACCTTGGACGGCTAAA
AGTCGTCCTCCTTATTACCGCGCTGTCGGTTTCTTTCTCAGTTTTCATCACTTTTTTGGCTTTTTCTCTTCGTCAGACAG
GTGCCGTTTACAACATTGCGTTTTTTTTAGCCACGTTTATTCCCTTGACTATTGCACCTATAGTTTCCTGGCCACTAATA
AGCTTGCTTATGAAAGTTGACTCTCTTGAAAAAGAGATGAGGCTGTTGGCATCGCTAGATCCTTTGACAGAACTATTAAA
TCGGCGGGCTTTTTTCCGTGATGCCGAATTATATATTCATCGTGCTAAGCAAGAGGGGAGGATGTTGTCTGTGATCGCAT
TGGATTTGGATAAATTTAAGGCGATAAATGATTGCTATGGACATAGCGCTGGTGATGCAGTGCTAAGGCACTTTTCTACA
ACGATAAGAGCTAACTGTCGAACGTCAGATTTAATGGGTCGTTTAGGTGGTGAGGAGTTTGCTCTGTTATTGCCAAACAC
GTCTGCCTCGGCCGCTTATGCGCTTGCAGAAAGGTTACATCAGGCTCTTAGGTTAACAGCGATTCAGTACGGTCACTCAA
CAATGCGTTATACAGTAAGTATTGGTGTTATATCAGTGGTGCCTCAAAAAACTGACAACATTGAAGCTCTGCTCAATAAA
GCCGATCGTTCGCTCTATCTTGCAAAAGAAACTGGCAGAAACTGTACCGTGGTATTCGATAGCTAA

Upstream 100 bases:

>100_bases
GTTTAAGGCTTGTTGTTATCATATGTGATTGAAATAAATGTAAATATAAATATCGCGGCAACGCAAGCTGAGTTATTATC
CTGCCCCCTTGGCTTTCTCC

Downstream 100 bases:

>100_bases
TACCATTCATTAGCTGCCGTTATTTTCCCGATGAGGTAGCTCTCAATATGAGAGCCTGATTTAACAATAAATCAGGCTCG
ATGCTAATTAAGCTGACAGG

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MPISLRSARRYLVQRMRHIIQNLGRLKVVLLITALSVSFSVFITFLAFSLRQTGAVYNIAFFLATFIPLTIAPIVSWPLI
SLLMKVDSLEKEMRLLASLDPLTELLNRRAFFRDAELYIHRAKQEGRMLSVIALDLDKFKAINDCYGHSAGDAVLRHFST
TIRANCRTSDLMGRLGGEEFALLLPNTSASAAYALAERLHQALRLTAIQYGHSTMRYTVSIGVISVVPQKTDNIEALLNK
ADRSLYLAKETGRNCTVVFDS

Sequences:

>Translated_261_residues
MPISLRSARRYLVQRMRHIIQNLGRLKVVLLITALSVSFSVFITFLAFSLRQTGAVYNIAFFLATFIPLTIAPIVSWPLI
SLLMKVDSLEKEMRLLASLDPLTELLNRRAFFRDAELYIHRAKQEGRMLSVIALDLDKFKAINDCYGHSAGDAVLRHFST
TIRANCRTSDLMGRLGGEEFALLLPNTSASAAYALAERLHQALRLTAIQYGHSTMRYTVSIGVISVVPQKTDNIEALLNK
ADRSLYLAKETGRNCTVVFDS
>Mature_260_residues
PISLRSARRYLVQRMRHIIQNLGRLKVVLLITALSVSFSVFITFLAFSLRQTGAVYNIAFFLATFIPLTIAPIVSWPLIS
LLMKVDSLEKEMRLLASLDPLTELLNRRAFFRDAELYIHRAKQEGRMLSVIALDLDKFKAINDCYGHSAGDAVLRHFSTT
IRANCRTSDLMGRLGGEEFALLLPNTSASAAYALAERLHQALRLTAIQYGHSTMRYTVSIGVISVVPQKTDNIEALLNKA
DRSLYLAKETGRNCTVVFDS

Specific function: Involves in the regulation of cellulose production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=190, Percent_Identity=38.4210526315789, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1787262, Length=167, Percent_Identity=38.9221556886228, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI87081881, Length=166, Percent_Identity=39.1566265060241, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787802, Length=174, Percent_Identity=35.0574712643678, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788381, Length=209, Percent_Identity=28.2296650717703, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI145693134, Length=177, Percent_Identity=35.5932203389831, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1787541, Length=170, Percent_Identity=36.4705882352941, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786584, Length=175, Percent_Identity=31.4285714285714, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1787816, Length=166, Percent_Identity=31.9277108433735, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788085, Length=177, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081977, Length=160, Percent_Identity=31.25, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87081974, Length=192, Percent_Identity=27.6041666666667, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788956, Length=158, Percent_Identity=33.5443037974684, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 29254; Mature: 29122

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISLRSARRYLVQRMRHIIQNLGRLKVVLLITALSVSFSVFITFLAFSLRQTGAVYNIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FFLATFIPLTIAPIVSWPLISLLMKVDSLEKEMRLLASLDPLTELLNRRAFFRDAELYIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAKQEGRMLSVIALDLDKFKAINDCYGHSAGDAVLRHFSTTIRANCRTSDLMGRLGGEEF
HHHHCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCE
ALLLPNTSASAAYALAERLHQALRLTAIQYGHSTMRYTVSIGVISVVPQKTDNIEALLNK
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCHHHHHHH
ADRSLYLAKETGRNCTVVFDS
HCCCEEEEECCCCEEEEEECC
>Mature Secondary Structure 
PISLRSARRYLVQRMRHIIQNLGRLKVVLLITALSVSFSVFITFLAFSLRQTGAVYNIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FFLATFIPLTIAPIVSWPLISLLMKVDSLEKEMRLLASLDPLTELLNRRAFFRDAELYIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAKQEGRMLSVIALDLDKFKAINDCYGHSAGDAVLRHFSTTIRANCRTSDLMGRLGGEEF
HHHHCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCE
ALLLPNTSASAAYALAERLHQALRLTAIQYGHSTMRYTVSIGVISVVPQKTDNIEALLNK
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCHHHHHHH
ADRSLYLAKETGRNCTVVFDS
HCCCEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA