| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962559
Identifier: 157962559
GI number: 157962559
Start: 3345901
End: 3347091
Strand: Reverse
Name: 157962559
Synonym: Spea_2738
Alternate gene names: NA
Gene position: 3347091-3345901 (Counterclockwise)
Preceding gene: 157962561
Following gene: 157962558
Centisome position: 64.68
GC content: 45.26
Gene sequence:
>1191_bases ATGAAAGCGCTGTTTCGCTTTTGTTTGTTAGCTGTTGTGGCAACACTGACAAGCGCCTGTTCACTGTTAGAAATTAAGTT GGAAAGTGGTATCGAGCCATTACCAAAAGATCAGCTTAATATGCGGGTATTTAGCCGTGATTTCAGTACGGTTTTTTATA GTCAAGTAGAGAGCTCTGCCGATCTTATTGAGCGCAATACCGATAGTATTCCGATTAAGTCTAATACCTTGATGTGGAAA ATTAATGCCGAGCAAAACCTGCAACATACAATTTTCCAATCCTCACCGACGGCGGCGATGGTAGACACTTGGGTATTTAC CGAGCAGATGGCGCAGTTCTTTGAGACGGGAGCGGGTAAGAACCTATTCGCTGAACAGCAACAGGTCGCCGTGGATGCCA GTATTAAATTGCGCGATCAATTTGAGCGCACGATTAAGAATTTTGGTGCTGAAAACTTCAAGAAGAATCAAGAGTTTGTG AAGCAGTATGTTGCCAGTCACCCCATAAAAGACATGGCTTTTGCCCGTGAGTCAGCCTTTACCGATTGGCTAGAGTTCCA TCAAATCAGTGAGTTTGATGCCATTACCACTTTTGGTACAGTGCCAGAAGTGATGAGCGATATCTCTGATAGAATGGCGA TGATAGCCGAGCAGATGCCTAAAATCTTAGGCTGGAAGGCCGAGCTGTATGCCCTGCATTCAAACATCAACGCCGATGAA ATTCAGCGCACCTTAATGAGCATCAGTGATACCTCGGCTAAGTTCCAGCAGCTAATGGCGCAAAGCCCTGAGATGATGCA GACCTTAGCGGTCGATATGCGCCGTGAATTAAGCCCACTACTTGAGCAGCTTAGCGTCGATACTGATGATAAACTAAAGC AGTTGTCGGTTGAGCGTCAGGCACTAGAGCTGATGGTAAAAAATGAGCGTATGGCGCTTGAAACTATGGTCGCTCGTGAG CGTGCCGCTGTTGCTGTTGATTTAGAGCAGTTATCTCAGCATACGGTTGAAGTGGTGTTCCAAGAAATTACTAAAACCTT AAAGAGCCTGATTTTATACTTTGTACTCTTCTTAGTGGTGGTGTTCTTTGCTCCGCTAGGTCTTGGTGTTTGGTTGGGTA AGCGCATGCAGCTGAAGAAGCAAGCGAGTAGCAGTACTAGTACTAATATTAGCCAAGAGCAAAAAGCCTAA
Upstream 100 bases:
>100_bases TAGACATAGCGATAGGTATTGTTGATTCGCAGTGTTAGAATTATTTATTAGGTGTGTTTTACCAAAATATTCAATGAATT GTGTGTTTTCTGGAGGAATT
Downstream 100 bases:
>100_bases AGGCATATTGGCCTTCACATGTTAAAATGACGAGCACCTATGATGGTGCTCGTTTTGTTTACGGCTGTGCTTACTGCCAG TATACGCTTCAATTATTGAC
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MKALFRFCLLAVVATLTSACSLLEIKLESGIEPLPKDQLNMRVFSRDFSTVFYSQVESSADLIERNTDSIPIKSNTLMWK INAEQNLQHTIFQSSPTAAMVDTWVFTEQMAQFFETGAGKNLFAEQQQVAVDASIKLRDQFERTIKNFGAENFKKNQEFV KQYVASHPIKDMAFARESAFTDWLEFHQISEFDAITTFGTVPEVMSDISDRMAMIAEQMPKILGWKAELYALHSNINADE IQRTLMSISDTSAKFQQLMAQSPEMMQTLAVDMRRELSPLLEQLSVDTDDKLKQLSVERQALELMVKNERMALETMVARE RAAVAVDLEQLSQHTVEVVFQEITKTLKSLILYFVLFLVVVFFAPLGLGVWLGKRMQLKKQASSSTSTNISQEQKA
Sequences:
>Translated_396_residues MKALFRFCLLAVVATLTSACSLLEIKLESGIEPLPKDQLNMRVFSRDFSTVFYSQVESSADLIERNTDSIPIKSNTLMWK INAEQNLQHTIFQSSPTAAMVDTWVFTEQMAQFFETGAGKNLFAEQQQVAVDASIKLRDQFERTIKNFGAENFKKNQEFV KQYVASHPIKDMAFARESAFTDWLEFHQISEFDAITTFGTVPEVMSDISDRMAMIAEQMPKILGWKAELYALHSNINADE IQRTLMSISDTSAKFQQLMAQSPEMMQTLAVDMRRELSPLLEQLSVDTDDKLKQLSVERQALELMVKNERMALETMVARE RAAVAVDLEQLSQHTVEVVFQEITKTLKSLILYFVLFLVVVFFAPLGLGVWLGKRMQLKKQASSSTSTNISQEQKA >Mature_396_residues MKALFRFCLLAVVATLTSACSLLEIKLESGIEPLPKDQLNMRVFSRDFSTVFYSQVESSADLIERNTDSIPIKSNTLMWK INAEQNLQHTIFQSSPTAAMVDTWVFTEQMAQFFETGAGKNLFAEQQQVAVDASIKLRDQFERTIKNFGAENFKKNQEFV KQYVASHPIKDMAFARESAFTDWLEFHQISEFDAITTFGTVPEVMSDISDRMAMIAEQMPKILGWKAELYALHSNINADE IQRTLMSISDTSAKFQQLMAQSPEMMQTLAVDMRRELSPLLEQLSVDTDDKLKQLSVERQALELMVKNERMALETMVARE RAAVAVDLEQLSQHTVEVVFQEITKTLKSLILYFVLFLVVVFFAPLGLGVWLGKRMQLKKQASSSTSTNISQEQKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44994; Mature: 44994
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALFRFCLLAVVATLTSACSLLEIKLESGIEPLPKDQLNMRVFSRDFSTVFYSQVESSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DLIERNTDSIPIKSNTLMWKINAEQNLQHTIFQSSPTAAMVDTWVFTEQMAQFFETGAGK HHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC NLFAEQQQVAVDASIKLRDQFERTIKNFGAENFKKNQEFVKQYVASHPIKDMAFARESAF CHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TDWLEFHQISEFDAITTFGTVPEVMSDISDRMAMIAEQMPKILGWKAELYALHSNINADE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHH IQRTLMSISDTSAKFQQLMAQSPEMMQTLAVDMRRELSPLLEQLSVDTDDKLKQLSVERQ HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ALELMVKNERMALETMVARERAAVAVDLEQLSQHTVEVVFQEITKTLKSLILYFVLFLVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFFAPLGLGVWLGKRMQLKKQASSSTSTNISQEQKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC >Mature Secondary Structure MKALFRFCLLAVVATLTSACSLLEIKLESGIEPLPKDQLNMRVFSRDFSTVFYSQVESSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DLIERNTDSIPIKSNTLMWKINAEQNLQHTIFQSSPTAAMVDTWVFTEQMAQFFETGAGK HHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC NLFAEQQQVAVDASIKLRDQFERTIKNFGAENFKKNQEFVKQYVASHPIKDMAFARESAF CHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TDWLEFHQISEFDAITTFGTVPEVMSDISDRMAMIAEQMPKILGWKAELYALHSNINADE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHH IQRTLMSISDTSAKFQQLMAQSPEMMQTLAVDMRRELSPLLEQLSVDTDDKLKQLSVERQ HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ALELMVKNERMALETMVARERAAVAVDLEQLSQHTVEVVFQEITKTLKSLILYFVLFLVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFFAPLGLGVWLGKRMQLKKQASSSTSTNISQEQKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA