| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962558
Identifier: 157962558
GI number: 157962558
Start: 3344453
End: 3345874
Strand: Reverse
Name: 157962558
Synonym: Spea_2737
Alternate gene names: NA
Gene position: 3345874-3344453 (Counterclockwise)
Preceding gene: 157962559
Following gene: 157962557
Centisome position: 64.66
GC content: 47.26
Gene sequence:
>1422_bases ATGACGAGCACCTATGATGGTGCTCGTTTTGTTTACGGCTGTGCTTACTGCCAGTATACGCTTCAATTATTGACAATGAA AATAACCCCAATACAAGAACTGACTCAACAAACTATGCAGAAACTTAATCCTAAACTTAAGCAGAAATCTAGGCTGAAAC CAAGCATAAGCGCTTGTAATGCAGAAGATCCCGCGAAAAAGCTTAAGCGTATTGATAGCTTCCTAACTCAAAGCCAAGCG CTATGGCGTTGTCGCAGCTTCGAGTGTGAATGCTTACCTTGGAGTGAGGGCTTTCCCAATTTGGCCGAGGCGGTATGGTT GCTAAGTGATGACTCTCTCGACGCTATTGATGCCAGTCAGCAGAAGCTCAATGAAGCACTGTTGCCAGCATTGACAGCAG ATTTAGATGCAAAGGGTATTCAGTGGCCTTTAGGGTTGCTTGCGGAGTCAGCCATTGGGGTAAAGTCTTGCGGATCGGTA ATTGATAATGCCAAAGCATTGCTCTGTGCCGAGGATGAGCCCCATTTCTGCGCCCACATTAAAGGTCGTAAATGGCAGCA GATTAATGCCTTTGTTGCTAAACTGCCTCGCGATAATACTCCTGTACTGGAGTGGTGCGCTGGAAAAGGGCATTTGGGGC GCTTGATTGCCAAAGCGCATCATCGAGAGGTGGTGAGTCTTGAGTGGCAGCAAAGCCTATGTGAAGCAGGCGAGCTGTTT GCGGCTAAATGGCAGCTGCCGCAAACCTTTATTTGCGCCGATGCTTTTGCTGGGCAAAGTGAGCAGTTACACACTGAGCA GCTTGCGGTTGCGTTGCATGCTTGTGGCGACTTACATGTAAAGTTGCTGCAACATGCTAGCGAGGCGGGCACTAAGCAAT TGGTGATCTCTCCTTGTTGTTACCATTTAATTCAAGCTAAGCAGTACCAGCCGTTATCACAAATAGCCAAAGCCAGTGCC CTTACATTGAATCGTGCCGACTTGCAGCTTCCCTTGCAGCAAAGCGTTATCGCCAATGATAAGCACAAAGGCTATAGATT ACAGGAGATGGCTTGGCGTTTAGGTTTTGATGCGTTGCAGCGTAAGGTACGCGGATGCAATGAATACCTGCCAGTTCCAG CAGTAAAGCAGAGTCAGTTAAATGGAGAGTTTGAGGACTTTTGCCTGTGGGCGGCTGAGTCGAAGGGGTTAAGATTAGCA ACTGATCTCGATTTTCAAGCTTATCAAGTTACTGGCGAGCAGCGTCAGCGCTTAACTCGACGAATCGATCTGGTGGCCCA TCTTTTCAGGGCGCTACTTGAGCAGTGGTTATTACTCGACAGAGTCTGCTTTCTTCAAGAGCAAGGTTACCAGGTTAATT TGAGTGAATTTTGTTCAAACAGTATTACGCCGCGAAACGCGTTAATTTACGCATTTAAATAG
Upstream 100 bases:
>100_bases GTAAGCGCATGCAGCTGAAGAAGCAAGCGAGTAGCAGTACTAGTACTAATATTAGCCAAGAGCAAAAAGCCTAAAGGCAT ATTGGCCTTCACATGTTAAA
Downstream 100 bases:
>100_bases AATTTACAGCGATACTTAATTTAATCTTGTCGTAACAAATTGTTTATTAAGTTGTAATTAAGTTAGCTGTGATTGAATCC GCCGCCAGAGTGACGCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MTSTYDGARFVYGCAYCQYTLQLLTMKITPIQELTQQTMQKLNPKLKQKSRLKPSISACNAEDPAKKLKRIDSFLTQSQA LWRCRSFECECLPWSEGFPNLAEAVWLLSDDSLDAIDASQQKLNEALLPALTADLDAKGIQWPLGLLAESAIGVKSCGSV IDNAKALLCAEDEPHFCAHIKGRKWQQINAFVAKLPRDNTPVLEWCAGKGHLGRLIAKAHHREVVSLEWQQSLCEAGELF AAKWQLPQTFICADAFAGQSEQLHTEQLAVALHACGDLHVKLLQHASEAGTKQLVISPCCYHLIQAKQYQPLSQIAKASA LTLNRADLQLPLQQSVIANDKHKGYRLQEMAWRLGFDALQRKVRGCNEYLPVPAVKQSQLNGEFEDFCLWAAESKGLRLA TDLDFQAYQVTGEQRQRLTRRIDLVAHLFRALLEQWLLLDRVCFLQEQGYQVNLSEFCSNSITPRNALIYAFK
Sequences:
>Translated_473_residues MTSTYDGARFVYGCAYCQYTLQLLTMKITPIQELTQQTMQKLNPKLKQKSRLKPSISACNAEDPAKKLKRIDSFLTQSQA LWRCRSFECECLPWSEGFPNLAEAVWLLSDDSLDAIDASQQKLNEALLPALTADLDAKGIQWPLGLLAESAIGVKSCGSV IDNAKALLCAEDEPHFCAHIKGRKWQQINAFVAKLPRDNTPVLEWCAGKGHLGRLIAKAHHREVVSLEWQQSLCEAGELF AAKWQLPQTFICADAFAGQSEQLHTEQLAVALHACGDLHVKLLQHASEAGTKQLVISPCCYHLIQAKQYQPLSQIAKASA LTLNRADLQLPLQQSVIANDKHKGYRLQEMAWRLGFDALQRKVRGCNEYLPVPAVKQSQLNGEFEDFCLWAAESKGLRLA TDLDFQAYQVTGEQRQRLTRRIDLVAHLFRALLEQWLLLDRVCFLQEQGYQVNLSEFCSNSITPRNALIYAFK >Mature_472_residues TSTYDGARFVYGCAYCQYTLQLLTMKITPIQELTQQTMQKLNPKLKQKSRLKPSISACNAEDPAKKLKRIDSFLTQSQAL WRCRSFECECLPWSEGFPNLAEAVWLLSDDSLDAIDASQQKLNEALLPALTADLDAKGIQWPLGLLAESAIGVKSCGSVI DNAKALLCAEDEPHFCAHIKGRKWQQINAFVAKLPRDNTPVLEWCAGKGHLGRLIAKAHHREVVSLEWQQSLCEAGELFA AKWQLPQTFICADAFAGQSEQLHTEQLAVALHACGDLHVKLLQHASEAGTKQLVISPCCYHLIQAKQYQPLSQIAKASAL TLNRADLQLPLQQSVIANDKHKGYRLQEMAWRLGFDALQRKVRGCNEYLPVPAVKQSQLNGEFEDFCLWAAESKGLRLAT DLDFQAYQVTGEQRQRLTRRIDLVAHLFRALLEQWLLLDRVCFLQEQGYQVNLSEFCSNSITPRNALIYAFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53201; Mature: 53069
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTYDGARFVYGCAYCQYTLQLLTMKITPIQELTQQTMQKLNPKLKQKSRLKPSISACN CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHCCCCCHHCCC AEDPAKKLKRIDSFLTQSQALWRCRSFECECLPWSEGFPNLAEAVWLLSDDSLDAIDASQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHEEEECCCCCCHHHHHH QKLNEALLPALTADLDAKGIQWPLGLLAESAIGVKSCGSVIDNAKALLCAEDEPHFCAHI HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCEEEEC KGRKWQQINAFVAKLPRDNTPVLEWCAGKGHLGRLIAKAHHREVVSLEWQQSLCEAGELF CCCCHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKWQLPQTFICADAFAGQSEQLHTEQLAVALHACGDLHVKLLQHASEAGTKQLVISPCC HHHCCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH YHLIQAKQYQPLSQIAKASALTLNRADLQLPLQQSVIANDKHKGYRLQEMAWRLGFDALQ HHHHHHHCCCCHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCHHHHH RKVRGCNEYLPVPAVKQSQLNGEFEDFCLWAAESKGLRLATDLDFQAYQVTGEQRQRLTR HHHHCCCCCCCCCCCHHHHCCCCHHHHEEEEECCCCEEEEECCCCEEEEECCHHHHHHHH RIDLVAHLFRALLEQWLLLDRVCFLQEQGYQVNLSEFCSNSITPRNALIYAFK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCCEEEEEC >Mature Secondary Structure TSTYDGARFVYGCAYCQYTLQLLTMKITPIQELTQQTMQKLNPKLKQKSRLKPSISACN CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHCCCCCHHCCC AEDPAKKLKRIDSFLTQSQALWRCRSFECECLPWSEGFPNLAEAVWLLSDDSLDAIDASQ CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHEEEECCCCCCHHHHHH QKLNEALLPALTADLDAKGIQWPLGLLAESAIGVKSCGSVIDNAKALLCAEDEPHFCAHI HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCEEEEC KGRKWQQINAFVAKLPRDNTPVLEWCAGKGHLGRLIAKAHHREVVSLEWQQSLCEAGELF CCCCHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKWQLPQTFICADAFAGQSEQLHTEQLAVALHACGDLHVKLLQHASEAGTKQLVISPCC HHHCCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH YHLIQAKQYQPLSQIAKASALTLNRADLQLPLQQSVIANDKHKGYRLQEMAWRLGFDALQ HHHHHHHCCCCHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCHHHHH RKVRGCNEYLPVPAVKQSQLNGEFEDFCLWAAESKGLRLATDLDFQAYQVTGEQRQRLTR HHHHCCCCCCCCCCCHHHHCCCCHHHHEEEEECCCCEEEEECCCCEEEEECCHHHHHHHH RIDLVAHLFRALLEQWLLLDRVCFLQEQGYQVNLSEFCSNSITPRNALIYAFK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA