| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962253
Identifier: 157962253
GI number: 157962253
Start: 2972942
End: 2973544
Strand: Reverse
Name: 157962253
Synonym: Spea_2432
Alternate gene names: NA
Gene position: 2973544-2972942 (Counterclockwise)
Preceding gene: 157962254
Following gene: 157962252
Centisome position: 57.46
GC content: 35.49
Gene sequence:
>603_bases ATGCTATTTAGAGGAAGTGGAGCAATATTATATCAAATATTGCCTATAAAGAGACCTACGACTGTGAAACAGTATTTTTC AATATTAATTACTTGTAGCATAACTATGTTAAGTGGCTGCGTTACACAAAACACCTCCATAACTTCAGGCGATGAAACAA CCGCACATCATTGGATTGTGAATCAACAGCATGATTACACTGTCAGTGCTGTTGGTACTGCTGTACGAGATAATGGTACG GAAATGATTGCACAGATTAAGAATTATCTAGATGGTCGCCATTCTGTGAAGCTGGTTGAAAATATTGGTAGTTGTAATGC TAATGAACAAGTACCACATACAGTTGAATCTATTATTTTAGTGGGTCATAAATACATGAGGGTTGTGAGCAATAATTATT GCATGGATGGCGAATTATCTGCTGAATATGTTTTTTCCTCAGGCTTCTCTAAAATTGAAGACCAAAAATTAAATAGCATT ACCTATGCTTTATTTAATGGTTTAGAGGTCGCTGGTGTTACTTTTGAATCGACAGGAGTTAAAAAGGTTATCGACGCATT AGTTGAGTCAGATGCAATTCTCAGAAGTGTGAATAAAACATAA
Upstream 100 bases:
>100_bases TTTTGTCGGTTATAATCGATTGATTGTAAATAAAAATAACCCCCCTTCAGCATTTTCATGCAAGCTCAATTAGTTTTATT AGAAATCTTTGATTACTTAA
Downstream 100 bases:
>100_bases GCATTTGATTATTCAATTAAGGGAGATAGTGCTAGTTCCCCGTCGCTATTGATCCTTTCGATTAAGCTTATCGCTTTAAT CTCCGCCCTAGTTATTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MLFRGSGAILYQILPIKRPTTVKQYFSILITCSITMLSGCVTQNTSITSGDETTAHHWIVNQQHDYTVSAVGTAVRDNGT EMIAQIKNYLDGRHSVKLVENIGSCNANEQVPHTVESIILVGHKYMRVVSNNYCMDGELSAEYVFSSGFSKIEDQKLNSI TYALFNGLEVAGVTFESTGVKKVIDALVESDAILRSVNKT
Sequences:
>Translated_200_residues MLFRGSGAILYQILPIKRPTTVKQYFSILITCSITMLSGCVTQNTSITSGDETTAHHWIVNQQHDYTVSAVGTAVRDNGT EMIAQIKNYLDGRHSVKLVENIGSCNANEQVPHTVESIILVGHKYMRVVSNNYCMDGELSAEYVFSSGFSKIEDQKLNSI TYALFNGLEVAGVTFESTGVKKVIDALVESDAILRSVNKT >Mature_200_residues MLFRGSGAILYQILPIKRPTTVKQYFSILITCSITMLSGCVTQNTSITSGDETTAHHWIVNQQHDYTVSAVGTAVRDNGT EMIAQIKNYLDGRHSVKLVENIGSCNANEQVPHTVESIILVGHKYMRVVSNNYCMDGELSAEYVFSSGFSKIEDQKLNSI TYALFNGLEVAGVTFESTGVKKVIDALVESDAILRSVNKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21974; Mature: 21974
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFRGSGAILYQILPIKRPTTVKQYFSILITCSITMLSGCVTQNTSITSGDETTAHHWIV CEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE NQQHDYTVSAVGTAVRDNGTEMIAQIKNYLDGRHSVKLVENIGSCNANEQVPHTVESIIL CCCCCEEHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH VGHKYMRVVSNNYCMDGELSAEYVFSSGFSKIEDQKLNSITYALFNGLEVAGVTFESTGV HHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCH KKVIDALVESDAILRSVNKT HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLFRGSGAILYQILPIKRPTTVKQYFSILITCSITMLSGCVTQNTSITSGDETTAHHWIV CEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE NQQHDYTVSAVGTAVRDNGTEMIAQIKNYLDGRHSVKLVENIGSCNANEQVPHTVESIIL CCCCCEEHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH VGHKYMRVVSNNYCMDGELSAEYVFSSGFSKIEDQKLNSITYALFNGLEVAGVTFESTGV HHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCH KKVIDALVESDAILRSVNKT HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA