Click here to switch to the map view.

The map label for this gene is yafS [H]

Identifier: 157962226

GI number: 157962226

Start: 2933747

End: 2934487

Strand: Reverse

Name: yafS [H]

Synonym: Spea_2405

Alternate gene names: 157962226

Gene position: 2934487-2933747 (Counterclockwise)

Preceding gene: 157962229

Following gene: 157962225

Centisome position: 56.71

GC content: 45.75

Gene sequence:

>741_bases
TTGTCACAGTCTGAATTACCGTTAAAGCCTTATCATTGGTCAGAACTCCCGAATGGGCCCGTTATACGCCAAAGCGTAGA
GCAGGCTTTATCTCCTTGGTGGCCAAGAATTTTTGGTTATTTCATGCTTAATCTAGGCCCCTTGAGTCATAAAATGGCAA
AAACTGGGGTTGGTATTAGTCGACAGTACTCTTTATTCGATGAGGCTCAGGCGAATATAGAGGGGGATTACTGCCAGTTA
CCGATCCAAAACACCAGCATTGATGCGGTAGTGATGAACTTCCTCCTCGAGTTTGAAGCCGACCCTTATCGTTTACTGCG
TGAAGTCGATAGAGTGCTCATTTCTGGTGGTCACTTGGTGATAACCGGATTTAACCCTCTCAGCCCTATGTTTATGGGGA
AAATCCTGCCTAGCCATCAGCAAGATATTCCATGGTGCGGTCGTTTTTTTATGCCCTCACGGGTAAAAGACTGGCTAGGT
CTACTGGGGTATCAAGTGGTTGCCGATGAGCGTTTATTACATCATCATCTGCTTAAAGAAATGAAAACAGACAATATTTG
GTCTCATGCGCTTAAGTCTTGGTTGCCCAGTACTGGTAGCGTATATGTCTTGGTGGCGAAGAAATTAGAGAGCCCTCTGA
CCCCAATACAACTAAAACGTAAAGTTAAGCGGCCAAGTTGGTCGACGGCGCCCAGTGCGAGTCGTGCAGGCCATGCGCCA
AAATCTTCAGATAAATATTAA

Upstream 100 bases:

>100_bases
CAAAATAAATTGAGCACTTTAGTTAGTTTACTGAGCAAAGCTATTGCTTGTATACCGCTTTCGTTATTAAAGTAGAACGT
CAGTGATTTTGGAGATTGAT

Downstream 100 bases:

>100_bases
GAGACTTAATGCGTATTACATTAAAACAGCTAGCCGTTTTTGAAGCGGTAGCTCGCAGCGGGCAAGTTGCAAAGGCGGCC
GAGATGTTGAGTTTATCGTC

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSQSELPLKPYHWSELPNGPVIRQSVEQALSPWWPRIFGYFMLNLGPLSHKMAKTGVGISRQYSLFDEAQANIEGDYCQL
PIQNTSIDAVVMNFLLEFEADPYRLLREVDRVLISGGHLVITGFNPLSPMFMGKILPSHQQDIPWCGRFFMPSRVKDWLG
LLGYQVVADERLLHHHLLKEMKTDNIWSHALKSWLPSTGSVYVLVAKKLESPLTPIQLKRKVKRPSWSTAPSASRAGHAP
KSSDKY

Sequences:

>Translated_246_residues
MSQSELPLKPYHWSELPNGPVIRQSVEQALSPWWPRIFGYFMLNLGPLSHKMAKTGVGISRQYSLFDEAQANIEGDYCQL
PIQNTSIDAVVMNFLLEFEADPYRLLREVDRVLISGGHLVITGFNPLSPMFMGKILPSHQQDIPWCGRFFMPSRVKDWLG
LLGYQVVADERLLHHHLLKEMKTDNIWSHALKSWLPSTGSVYVLVAKKLESPLTPIQLKRKVKRPSWSTAPSASRAGHAP
KSSDKY
>Mature_245_residues
SQSELPLKPYHWSELPNGPVIRQSVEQALSPWWPRIFGYFMLNLGPLSHKMAKTGVGISRQYSLFDEAQANIEGDYCQLP
IQNTSIDAVVMNFLLEFEADPYRLLREVDRVLISGGHLVITGFNPLSPMFMGKILPSHQQDIPWCGRFFMPSRVKDWLGL
LGYQVVADERLLHHHLLKEMKTDNIWSHALKSWLPSTGSVYVLVAKKLESPLTPIQLKRKVKRPSWSTAPSASRAGHAPK
SSDKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=236, Percent_Identity=32.2033898305085, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27964; Mature: 27833

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSELPLKPYHWSELPNGPVIRQSVEQALSPWWPRIFGYFMLNLGPLSHKMAKTGVGIS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC
RQYSLFDEAQANIEGDYCQLPIQNTSIDAVVMNFLLEFEADPYRLLREVDRVLISGGHLV
HHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEE
ITGFNPLSPMFMGKILPSHQQDIPWCGRFFMPSRVKDWLGLLGYQVVADERLLHHHLLKE
EECCCCCCHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKTDNIWSHALKSWLPSTGSVYVLVAKKLESPLTPIQLKRKVKRPSWSTAPSASRAGHAP
HCCCHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
KSSDKY
CCCCCC
>Mature Secondary Structure 
SQSELPLKPYHWSELPNGPVIRQSVEQALSPWWPRIFGYFMLNLGPLSHKMAKTGVGIS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCC
RQYSLFDEAQANIEGDYCQLPIQNTSIDAVVMNFLLEFEADPYRLLREVDRVLISGGHLV
HHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEE
ITGFNPLSPMFMGKILPSHQQDIPWCGRFFMPSRVKDWLGLLGYQVVADERLLHHHLLKE
EECCCCCCHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKTDNIWSHALKSWLPSTGSVYVLVAKKLESPLTPIQLKRKVKRPSWSTAPSASRAGHAP
HCCCHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
KSSDKY
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]