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The map label for this gene is yeiE [H]

Identifier: 157962225

GI number: 157962225

Start: 2932842

End: 2933738

Strand: Reverse

Name: yeiE [H]

Synonym: Spea_2404

Alternate gene names: 157962225

Gene position: 2933738-2932842 (Counterclockwise)

Preceding gene: 157962226

Following gene: 157962223

Centisome position: 56.7

GC content: 46.71

Gene sequence:

>897_bases
ATGCGTATTACATTAAAACAGCTAGCCGTTTTTGAAGCGGTAGCTCGCAGCGGGCAAGTTGCAAAGGCGGCCGAGATGTT
GAGTTTATCGTCTCCAGCCACCTCTATGGCATTGTCAGAATTAGAGAAGCAACTGGATGCGCGTTTATTTGAACGTATTG
GTAATCGCTTACGGTTAAACTCTCAAGGGAGTCTACTGTTACCTTTAGCTACCCAAGCACTGCAAAAGATTGATCAAATT
GAACATGCTTTTTCGCCAGCCGGCACCGAGCTTGGCGGTAACCTCAACGTTAGCGCTAGCTCTACGATAGGTAATTATCT
GTTAGCAAAGTCGGCGGTTGCATTTTGTCAGCAGTACACTAATACCTTGGTGAATGTCGATATCGAAAATAGCCAAAAGG
TCATTAATTCGGTTTTAGAGTTTAGAAGTGAGATGGGTTTTATTGAGGGGCAATGTCTCGACAGTCGTATTGCCGTCGAA
GCGTGGCACAGAGACAAGTTGTTGGTTTTTTGTCATCCTGCGCACCCGCTCGCGGGTAAAACTGTTGCGCCGAGTGAGCT
CAGCGGCATGCCCTGGGTGATGCGAGAAGAGGGTTCTGGCACTCGAGATTGTTTTGTCAGTGCGGCGAATGCTCTGGATA
TGCAACCACAAGAAAAGTTCCGATTTTCGACTCCGGATGCGATTAAACAAGCGGTAAAGCAGGGAGCAGGGCTTGGGGTG
TTATCTGAGCTAACTCTTGAGAAAGAACTGATCCGTAAAGAGTTGTCAGTCATCGAAGTTGAAGGGTTAGGATTAGAGCG
ACAGTTTTATCGAATCCATCATAAGAGCCGCCACTTTACCCCGGTGGGTTTAGCCTTTATTGATTTTTGCCGAACTTTTC
TTAATACGGAGCACTAA

Upstream 100 bases:

>100_bases
AACTAAAACGTAAAGTTAAGCGGCCAAGTTGGTCGACGGCGCCCAGTGCGAGTCGTGCAGGCCATGCGCCAAAATCTTCA
GATAAATATTAAGAGACTTA

Downstream 100 bases:

>100_bases
TGTTCCAAAGATAAGTTCTAAAGATAAAGCTTAGAACCAGCCAGCGTGACAGGTTCTAGGCCGAGTTTATTATTAGTCTT
GTTTTTGCTGAGCTAGGTAC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRITLKQLAVFEAVARSGQVAKAAEMLSLSSPATSMALSELEKQLDARLFERIGNRLRLNSQGSLLLPLATQALQKIDQI
EHAFSPAGTELGGNLNVSASSTIGNYLLAKSAVAFCQQYTNTLVNVDIENSQKVINSVLEFRSEMGFIEGQCLDSRIAVE
AWHRDKLLVFCHPAHPLAGKTVAPSELSGMPWVMREEGSGTRDCFVSAANALDMQPQEKFRFSTPDAIKQAVKQGAGLGV
LSELTLEKELIRKELSVIEVEGLGLERQFYRIHHKSRHFTPVGLAFIDFCRTFLNTEH

Sequences:

>Translated_298_residues
MRITLKQLAVFEAVARSGQVAKAAEMLSLSSPATSMALSELEKQLDARLFERIGNRLRLNSQGSLLLPLATQALQKIDQI
EHAFSPAGTELGGNLNVSASSTIGNYLLAKSAVAFCQQYTNTLVNVDIENSQKVINSVLEFRSEMGFIEGQCLDSRIAVE
AWHRDKLLVFCHPAHPLAGKTVAPSELSGMPWVMREEGSGTRDCFVSAANALDMQPQEKFRFSTPDAIKQAVKQGAGLGV
LSELTLEKELIRKELSVIEVEGLGLERQFYRIHHKSRHFTPVGLAFIDFCRTFLNTEH
>Mature_298_residues
MRITLKQLAVFEAVARSGQVAKAAEMLSLSSPATSMALSELEKQLDARLFERIGNRLRLNSQGSLLLPLATQALQKIDQI
EHAFSPAGTELGGNLNVSASSTIGNYLLAKSAVAFCQQYTNTLVNVDIENSQKVINSVLEFRSEMGFIEGQCLDSRIAVE
AWHRDKLLVFCHPAHPLAGKTVAPSELSGMPWVMREEGSGTRDCFVSAANALDMQPQEKFRFSTPDAIKQAVKQGAGLGV
LSELTLEKELIRKELSVIEVEGLGLERQFYRIHHKSRHFTPVGLAFIDFCRTFLNTEH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=294, Percent_Identity=39.1156462585034, Blast_Score=204, Evalue=4e-54,
Organism=Escherichia coli, GI1788748, Length=296, Percent_Identity=23.9864864864865, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1787530, Length=249, Percent_Identity=24.8995983935743, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787128, Length=299, Percent_Identity=26.0869565217391, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI145693105, Length=203, Percent_Identity=25.615763546798, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1787601, Length=199, Percent_Identity=26.6331658291457, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI87081904, Length=206, Percent_Identity=30.5825242718447, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1786401, Length=298, Percent_Identity=22.1476510067114, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790399, Length=274, Percent_Identity=23.3576642335766, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32872; Mature: 32872

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLKQLAVFEAVARSGQVAKAAEMLSLSSPATSMALSELEKQLDARLFERIGNRLRLN
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEC
SQGSLLLPLATQALQKIDQIEHAFSPAGTELGGNLNVSASSTIGNYLLAKSAVAFCQQYT
CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NTLVNVDIENSQKVINSVLEFRSEMGFIEGQCLDSRIAVEAWHRDKLLVFCHPAHPLAGK
HHEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCEEEEEECCCCCCCC
TVAPSELSGMPWVMREEGSGTRDCFVSAANALDMQPQEKFRFSTPDAIKQAVKQGAGLGV
CCCCHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCCCCCH
LSELTLEKELIRKELSVIEVEGLGLERQFYRIHHKSRHFTPVGLAFIDFCRTFLNTEH
HHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRITLKQLAVFEAVARSGQVAKAAEMLSLSSPATSMALSELEKQLDARLFERIGNRLRLN
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEC
SQGSLLLPLATQALQKIDQIEHAFSPAGTELGGNLNVSASSTIGNYLLAKSAVAFCQQYT
CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NTLVNVDIENSQKVINSVLEFRSEMGFIEGQCLDSRIAVEAWHRDKLLVFCHPAHPLAGK
HHEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEECCCCEEEEEECCCCCCCC
TVAPSELSGMPWVMREEGSGTRDCFVSAANALDMQPQEKFRFSTPDAIKQAVKQGAGLGV
CCCCHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCCCCCH
LSELTLEKELIRKELSVIEVEGLGLERQFYRIHHKSRHFTPVGLAFIDFCRTFLNTEH
HHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]