| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962217
Identifier: 157962217
GI number: 157962217
Start: 2920584
End: 2920958
Strand: Reverse
Name: 157962217
Synonym: Spea_2396
Alternate gene names: NA
Gene position: 2920958-2920584 (Counterclockwise)
Preceding gene: 157962218
Following gene: 157962216
Centisome position: 56.45
GC content: 45.87
Gene sequence:
>375_bases ATGCGTCGCACCTCAAATACATTGTTACTCGTCGCGATAACGACACTGACAACACCAGTCTGGGCTGACGAACCTCAGCA GGAAATTTTATTAAAAGAAGAGAAAATTGATACAGGACTGAAGAATTTCGGCTATCAGACAGGCTTAGCTCTTGGCTGTG TGGCCGCAGAACAACGCGCACAATTAGAAACCGAGGCAATGAATATCAATAGCGAAATCAGTCGCACTCTGGGTGGTGAC CGAGCGTTTCTCTATGCCGCTAGCTTTGGTTACGGCACCAATATAGAACTCAATGTGCAGGAGTGCAAACAAGCGTTAGC AAACTTTGAAAAACGTGCCGCAGCATTTCATCAAGACACGAGAGGCAAAAAATGA
Upstream 100 bases:
>100_bases TAGCACCATCAGCGAATAATCACTGAAACTGACTCACTTATAGTGAAGTGCAAACTTCACTAAGTGGAATTAATCAAAAG TTGGGGACCTGGAGAGATTT
Downstream 100 bases:
>100_bases AACAAGACCTGACACTCGCCCTGACAGTATTGCTGGTTGCCGGTCTAGGGAGCTTTGATGCCAATGCTGGCCGCTACGAA GTACGCAAAGAGATCCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MRRTSNTLLLVAITTLTTPVWADEPQQEILLKEEKIDTGLKNFGYQTGLALGCVAAEQRAQLETEAMNINSEISRTLGGD RAFLYAASFGYGTNIELNVQECKQALANFEKRAAAFHQDTRGKK
Sequences:
>Translated_124_residues MRRTSNTLLLVAITTLTTPVWADEPQQEILLKEEKIDTGLKNFGYQTGLALGCVAAEQRAQLETEAMNINSEISRTLGGD RAFLYAASFGYGTNIELNVQECKQALANFEKRAAAFHQDTRGKK >Mature_124_residues MRRTSNTLLLVAITTLTTPVWADEPQQEILLKEEKIDTGLKNFGYQTGLALGCVAAEQRAQLETEAMNINSEISRTLGGD RAFLYAASFGYGTNIELNVQECKQALANFEKRAAAFHQDTRGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13726; Mature: 13726
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTSNTLLLVAITTLTTPVWADEPQQEILLKEEKIDTGLKNFGYQTGLALGCVAAEQRA CCCCCCCEEEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH QLETEAMNINSEISRTLGGDRAFLYAASFGYGTNIELNVQECKQALANFEKRAAAFHQDT HHHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHC RGKK CCCC >Mature Secondary Structure MRRTSNTLLLVAITTLTTPVWADEPQQEILLKEEKIDTGLKNFGYQTGLALGCVAAEQRA CCCCCCCEEEEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH QLETEAMNINSEISRTLGGDRAFLYAASFGYGTNIELNVQECKQALANFEKRAAAFHQDT HHHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHC RGKK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA