Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 157962160

GI number: 157962160

Start: 2850544

End: 2851191

Strand: Reverse

Name: uidR [C]

Synonym: Spea_2339

Alternate gene names: 157962160

Gene position: 2851191-2850544 (Counterclockwise)

Preceding gene: 157962162

Following gene: 157962159

Centisome position: 55.1

GC content: 43.98

Gene sequence:

>648_bases
ATGGCAAATCGCTCCGATACAAAAACAAGAATACTGGATGCTGCGGAAAAATTATTTGCAGAAAGAGGTTTTTCAGAAAC
CTCACTAAGACTAATTACAAGTAAAGCTGAAGTAAACCTTGCATCTGTGAATTACCATTTTGGCTCTAAAAAGGAGCTGA
TCCGGGCGGTACTCGCACGTTACCTCGATGTGTTTATGCCAGCTGCCGCCGAGGCCATTGTTGCTGTGCGTAGTAATAAT
GCGAACGCATCCTTAGACGACATCTTTTCGACCTTGGTGGCACCTTTACTCGATCTTAATAGCTTGAGAGCGGAAGGGAC
TACGACCTTCTTGCAATTATTAGGGCGTGGTTACATTGAAAGCCAAGGTCACCTCCGTTGGTTTATCACCACACACTATG
GAGAATACTTAGGGTTATTCGTTAAGGCTGTCGCCGAAAGTGCACCACATATTCCTCCCGCAGAGATGTTTTGGCGATTA
CACTTTACCTTAGGTACGATTGTTTTCACCATGGCGTCAGCCGATGCATTAACAGAAATTGCAGAAGCTGATTTTGGGGA
GCAAAATGATATTGAAGCTGTTATCAGAAAAGTCATTCCGTATTTGTCTGCCGGAGTGTCCGTTCCACTTACTAAGGATG
TAATGTAA

Upstream 100 bases:

>100_bases
AATATTGACCTGTTTGCTTGATTAAAGGGATTTCGTTTGACAAAAAGAAAGCGAATGTTTAATTTAAACGAGTGTTTTAA
ATAGAAATAGAGGCAACGGA

Downstream 100 bases:

>100_bases
AAATTATGGCTACGACATTATTAGTACTGTTGCTTATCGCAATAGTCGTTGTATTCAGCGTTAAAAACATCAGGATGCAG
TTAATTACGCGTCCTGTATT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator PsrA; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein Tetr; Transcription Regulator Protein; PsrA Protein; TetR Family Transcription Factor; TRANSCRIPTIONal REGULATOR TetR Family; Transcriptional Regulator Transcription Regulator Protein; Transcriptional Regulator TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MANRSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLARYLDVFMPAAAEAIVAVRSNN
ANASLDDIFSTLVAPLLDLNSLRAEGTTTFLQLLGRGYIESQGHLRWFITTHYGEYLGLFVKAVAESAPHIPPAEMFWRL
HFTLGTIVFTMASADALTEIAEADFGEQNDIEAVIRKVIPYLSAGVSVPLTKDVM

Sequences:

>Translated_215_residues
MANRSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLARYLDVFMPAAAEAIVAVRSNN
ANASLDDIFSTLVAPLLDLNSLRAEGTTTFLQLLGRGYIESQGHLRWFITTHYGEYLGLFVKAVAESAPHIPPAEMFWRL
HFTLGTIVFTMASADALTEIAEADFGEQNDIEAVIRKVIPYLSAGVSVPLTKDVM
>Mature_214_residues
ANRSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLARYLDVFMPAAAEAIVAVRSNNA
NASLDDIFSTLVAPLLDLNSLRAEGTTTFLQLLGRGYIESQGHLRWFITTHYGEYLGLFVKAVAESAPHIPPAEMFWRLH
FTLGTIVFTMASADALTEIAEADFGEQNDIEAVIRKVIPYLSAGVSVPLTKDVM

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23669; Mature: 23538

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLAR
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHEEEHHHHEEEEEEEECCCCHHHHHHHHHHH
YLDVFMPAAAEAIVAVRSNNANASLDDIFSTLVAPLLDLNSLRAEGTTTFLQLLGRGYIE
HHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
SQGHLRWFITTHYGEYLGLFVKAVAESAPHIPPAEMFWRLHFTLGTIVFTMASADALTEI
CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEADFGEQNDIEAVIRKVIPYLSAGVSVPLTKDVM
HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ANRSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLAR
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHEEEHHHHEEEEEEEECCCCHHHHHHHHHHH
YLDVFMPAAAEAIVAVRSNNANASLDDIFSTLVAPLLDLNSLRAEGTTTFLQLLGRGYIE
HHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
SQGHLRWFITTHYGEYLGLFVKAVAESAPHIPPAEMFWRLHFTLGTIVFTMASADALTEI
CCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEADFGEQNDIEAVIRKVIPYLSAGVSVPLTKDVM
HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA